Definition Prochlorococcus marinus str. NATL1A, complete genome.
Accession NC_008819
Length 1,864,731

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The map label for this gene is 124024822

Identifier: 124024822

GI number: 124024822

Start: 105959

End: 106630

Strand: Direct

Name: 124024822

Synonym: NATL1_01091

Alternate gene names: NA

Gene position: 105959-106630 (Clockwise)

Preceding gene: 124024820

Following gene: 124024825

Centisome position: 5.68

GC content: 40.03

Gene sequence:

>672_bases
TTGTTCATAACTGTATGTGGCCAGAAAGGTGGAGTAGCTAAAACTTGTACCTCAATTCATCTTGCAAGTGTATGGTCTTC
TGAAGGGAAAAATGTTTGTTTAGTTGATGCTGATAGAAACCGATCTGCTCTTGCCTATGGTTTAAGAGGTAATCTTAAAT
TTAATATTGTCCCTGTAGAGGCAGCCGCTAAAGCAACAAGATTCTCAGAAATTGTTATTACTGATGGACAAGCAAGTACT
GATGAAGAAGAATTGAAACATCTGGCAGCTGGATCTGACCTTGTCCTTTTGCCAACAGCGCCAAAAGCAAGATCGGTCGA
ATTAACTGTCGAATTAGCCTCTTTATTAAAACAGTTAAATATTCCTCATGCAGTTTTATTAGTTAAGGTTGACTTCCGCC
AAAGGCGAATTGCAAATGAAGCAAGAGAAGCCTTAGAAAAATTTGACTTAACTGTATTAGAAGGTGATATCCCTTTACTA
TCTGCTTTTGATAAAGCAGAAAACCAAGGATCAGCTGTAATTGATGCAGTAGACGATAAAGGTCGATCCGATCCCAGGCG
AATGTCAGGTTGGTCGGCCTATTGTTCCATTGCTCAACAAATTCAATGCCAGATTTCGAAGCACTTGTCAGACATCAACA
AACGAGTCGAAGACCTGCCACTGAGCGCTTAA

Upstream 100 bases:

>100_bases
TTTAACTTGTTATTATTAGTATTGCTTGGGTGCATGGCTAATTGCTACTTGACTTTTTAATGAGATCCTGCAAATTATTT
TTAGATGTAAATCCCTTCCT

Downstream 100 bases:

>100_bases
AAGTAGTTGAAAAACTTTCTATATCTACTCAAACTCCTACTACCGATGGGAAAAATCTAAGTACATTATTTTTTGGTTTG
ATCGGAGGATTGTTTGGATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MFITVCGQKGGVAKTCTSIHLASVWSSEGKNVCLVDADRNRSALAYGLRGNLKFNIVPVEAAAKATRFSEIVITDGQAST
DEEELKHLAAGSDLVLLPTAPKARSVELTVELASLLKQLNIPHAVLLVKVDFRQRRIANEAREALEKFDLTVLEGDIPLL
SAFDKAENQGSAVIDAVDDKGRSDPRRMSGWSAYCSIAQQIQCQISKHLSDINKRVEDLPLSA

Sequences:

>Translated_223_residues
MFITVCGQKGGVAKTCTSIHLASVWSSEGKNVCLVDADRNRSALAYGLRGNLKFNIVPVEAAAKATRFSEIVITDGQAST
DEEELKHLAAGSDLVLLPTAPKARSVELTVELASLLKQLNIPHAVLLVKVDFRQRRIANEAREALEKFDLTVLEGDIPLL
SAFDKAENQGSAVIDAVDDKGRSDPRRMSGWSAYCSIAQQIQCQISKHLSDINKRVEDLPLSA
>Mature_223_residues
MFITVCGQKGGVAKTCTSIHLASVWSSEGKNVCLVDADRNRSALAYGLRGNLKFNIVPVEAAAKATRFSEIVITDGQAST
DEEELKHLAAGSDLVLLPTAPKARSVELTVELASLLKQLNIPHAVLLVKVDFRQRRIANEAREALEKFDLTVLEGDIPLL
SAFDKAENQGSAVIDAVDDKGRSDPRRMSGWSAYCSIAQQIQCQISKHLSDINKRVEDLPLSA

Specific function: Unknown

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24213; Mature: 24213

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFITVCGQKGGVAKTCTSIHLASVWSSEGKNVCLVDADRNRSALAYGLRGNLKFNIVPVE
CEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCEEEEEEECH
AAAKATRFSEIVITDGQASTDEEELKHLAAGSDLVLLPTAPKARSVELTVELASLLKQLN
HHHHHHCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHHHC
IPHAVLLVKVDFRQRRIANEAREALEKFDLTVLEGDIPLLSAFDKAENQGSAVIDAVDDK
CCEEEEEEEECHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCCCCEEEEECCCC
GRSDPRRMSGWSAYCSIAQQIQCQISKHLSDINKRVEDLPLSA
CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MFITVCGQKGGVAKTCTSIHLASVWSSEGKNVCLVDADRNRSALAYGLRGNLKFNIVPVE
CEEEEECCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCEEEEEEECH
AAAKATRFSEIVITDGQASTDEEELKHLAAGSDLVLLPTAPKARSVELTVELASLLKQLN
HHHHHHCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCEEEEHHHHHHHHHHHC
IPHAVLLVKVDFRQRRIANEAREALEKFDLTVLEGDIPLLSAFDKAENQGSAVIDAVDDK
CCEEEEEEEECHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHCCCCCCEEEEECCCC
GRSDPRRMSGWSAYCSIAQQIQCQISKHLSDINKRVEDLPLSA
CCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA