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The map label for this gene is rfbU [H]

Identifier: 124024825

GI number: 124024825

Start: 109396

End: 110460

Strand: Direct

Name: rfbU [H]

Synonym: NATL1_01121

Alternate gene names: 124024825

Gene position: 109396-110460 (Clockwise)

Preceding gene: 124024822

Following gene: 124024826

Centisome position: 5.87

GC content: 30.14

Gene sequence:

>1065_bases
ATGACTTCTATAGTTTTTAATGGGAGCTATATAACAAAAAAAAATACAGGTATTGGAGTTGTTTCTAAGGATTTAGTATA
TTCTTTATCAGCCCATAAAATAACTACACTTATCCCAAAAGATCTAGGTATAAAAGGTGATATTTATATTCCTAATAACT
TATCTCCAGGTACAGGTTTAAAAAGCCATTTCAGACGATTGTATTGGCTTCAACATTCTGTGCCAAAATTAATGAATAAT
TTAAATGCTGAATATTTTCTATCACCATTATTGGAAGCGCCATTGTTTTCTAATATTAAATCGATTGTCTTGGCGCATGA
TTTAATACCAATTAGGTATCCTTCGGTATCATTTTTAACTTTATATTATTTAATTTATATTCCTTTGATTTTAAAACAAT
CAAAATTAATTCTATGTAATTCTGTTTCTACTGCTAATGATTTGCATAGGTTTTATAAGGTTCCTATGCATAAATTATTT
CCAATCAAGTTAGGATTTAATAATAAAAAGTATTATCCAATAAAAAAAATTCGAAAAAAATTCTTTCTTATTATTGGTAG
ACATAATCCACATAAGAATTTACGAAGGGTTATCAAAGCGTTTGCATATTCCAAAATAAATGATTATAAGCTTATTTTTG
TAGGTCCTTTTGATCAAAGGCATACACCAATTCTTCTAAAACTAATTGACAAATATAAGATTAGACATTTGTGTGTATGG
AAAGGTTGGATTGATGATAATGAAAAATTATCATTATTAAACGAATGTCACGCACTTATTATTGCGAGTCTTTGGGAAGG
GTTTGGCCTTCCAGCACTTGAGGCAATGGCCTGTGGAACCCCCGTTATCGCTTCTGATAGAGGAGCGCTTCGCGAAGTTA
TGGGTAATTATGGTTATTTTATTAATCCATTCAATATTCAATCAATAGCTTGTGCAATGAATGCTGTCATAAACGATAAA
AAATGCTTTGAAAAAGCTCTTCAAGAAGGCCCATCTCGAGCTGAGTCTTTTAATTGGTTGGATACTGCTAGAACAATAGA
AAAAATTATTCATGAAATCGATTAA

Upstream 100 bases:

>100_bases
TGATTACTATTTTTTTTATATTTAAAAAATTTAAAAAAGTTGGCTCTCAACATTTGATTGACTATTATCTAAGATAGATT
TCTATGCGAATATTATAACC

Downstream 100 bases:

>100_bases
CTTCTATTACCAAGCTATAAATTTATAATGTAATTGATGTTATAAATTTATTAATCAACTAAATACATTAGATTCTTTCT
TTTGAGTATTATTTAGATTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 353

Protein sequence:

>354_residues
MTSIVFNGSYITKKNTGIGVVSKDLVYSLSAHKITTLIPKDLGIKGDIYIPNNLSPGTGLKSHFRRLYWLQHSVPKLMNN
LNAEYFLSPLLEAPLFSNIKSIVLAHDLIPIRYPSVSFLTLYYLIYIPLILKQSKLILCNSVSTANDLHRFYKVPMHKLF
PIKLGFNNKKYYPIKKIRKKFFLIIGRHNPHKNLRRVIKAFAYSKINDYKLIFVGPFDQRHTPILLKLIDKYKIRHLCVW
KGWIDDNEKLSLLNECHALIIASLWEGFGLPALEAMACGTPVIASDRGALREVMGNYGYFINPFNIQSIACAMNAVINDK
KCFEKALQEGPSRAESFNWLDTARTIEKIIHEID

Sequences:

>Translated_354_residues
MTSIVFNGSYITKKNTGIGVVSKDLVYSLSAHKITTLIPKDLGIKGDIYIPNNLSPGTGLKSHFRRLYWLQHSVPKLMNN
LNAEYFLSPLLEAPLFSNIKSIVLAHDLIPIRYPSVSFLTLYYLIYIPLILKQSKLILCNSVSTANDLHRFYKVPMHKLF
PIKLGFNNKKYYPIKKIRKKFFLIIGRHNPHKNLRRVIKAFAYSKINDYKLIFVGPFDQRHTPILLKLIDKYKIRHLCVW
KGWIDDNEKLSLLNECHALIIASLWEGFGLPALEAMACGTPVIASDRGALREVMGNYGYFINPFNIQSIACAMNAVINDK
KCFEKALQEGPSRAESFNWLDTARTIEKIIHEID
>Mature_353_residues
TSIVFNGSYITKKNTGIGVVSKDLVYSLSAHKITTLIPKDLGIKGDIYIPNNLSPGTGLKSHFRRLYWLQHSVPKLMNNL
NAEYFLSPLLEAPLFSNIKSIVLAHDLIPIRYPSVSFLTLYYLIYIPLILKQSKLILCNSVSTANDLHRFYKVPMHKLFP
IKLGFNNKKYYPIKKIRKKFFLIIGRHNPHKNLRRVIKAFAYSKINDYKLIFVGPFDQRHTPILLKLIDKYKIRHLCVWK
GWIDDNEKLSLLNECHALIIASLWEGFGLPALEAMACGTPVIASDRGALREVMGNYGYFINPFNIQSIACAMNAVINDKK
CFEKALQEGPSRAESFNWLDTARTIEKIIHEID

Specific function: Unknown

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 40542; Mature: 40411

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSIVFNGSYITKKNTGIGVVSKDLVYSLSAHKITTLIPKDLGIKGDIYIPNNLSPGTGL
CCEEEECCEEEEECCCCCCEEEHHHHHHHHHHHEEEECCCCCCCCCCEEECCCCCCCCCH
KSHFRRLYWLQHSVPKLMNNLNAEYFLSPLLEAPLFSNIKSIVLAHDLIPIRYPSVSFLT
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHCCEEECCCCHHHHH
LYYLIYIPLILKQSKLILCNSVSTANDLHRFYKVPMHKLFPIKLGFNNKKYYPIKKIRKK
HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCHHHEEEEEECCCCCCCCCHHHHHHH
FFLIIGRHNPHKNLRRVIKAFAYSKINDYKLIFVGPFDQRHTPILLKLIDKYKIRHLCVW
HEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHEEEEEE
KGWIDDNEKLSLLNECHALIIASLWEGFGLPALEAMACGTPVIASDRGALREVMGNYGYF
ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEECCHHHHHHHHCCCCCE
INPFNIQSIACAMNAVINDKKCFEKALQEGPSRAESFNWLDTARTIEKIIHEID
ECCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSIVFNGSYITKKNTGIGVVSKDLVYSLSAHKITTLIPKDLGIKGDIYIPNNLSPGTGL
CEEEECCEEEEECCCCCCEEEHHHHHHHHHHHEEEECCCCCCCCCCEEECCCCCCCCCH
KSHFRRLYWLQHSVPKLMNNLNAEYFLSPLLEAPLFSNIKSIVLAHDLIPIRYPSVSFLT
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHHHHHHCCEEECCCCHHHHH
LYYLIYIPLILKQSKLILCNSVSTANDLHRFYKVPMHKLFPIKLGFNNKKYYPIKKIRKK
HHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCHHHEEEEEECCCCCCCCCHHHHHHH
FFLIIGRHNPHKNLRRVIKAFAYSKINDYKLIFVGPFDQRHTPILLKLIDKYKIRHLCVW
HEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHEEEEEE
KGWIDDNEKLSLLNECHALIIASLWEGFGLPALEAMACGTPVIASDRGALREVMGNYGYF
ECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEECCHHHHHHHHCCCCCE
INPFNIQSIACAMNAVINDKKCFEKALQEGPSRAESFNWLDTARTIEKIIHEID
ECCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]