| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is hisC1 [H]
Identifier: 124024434
GI number: 124024434
Start: 2416517
End: 2417650
Strand: Reverse
Name: hisC1 [H]
Synonym: P9303_27461
Alternate gene names: 124024434
Gene position: 2417650-2416517 (Counterclockwise)
Preceding gene: 124024435
Following gene: 124024431
Centisome position: 90.12
GC content: 55.03
Gene sequence:
>1134_bases ATGGGGTCTTCACCTGCACGAATGAGTTCTGGTGCCCCCGCTCCTCGGGTGGAAGTGGAGTGTCTGAAGGCCTATAGCGC TCCGCTTGAGGGTCGCCGTGGATTGCTGCGCCTTGATTTTAATGAGAATACGATCGGCCCTAGCCCTCGTGTACTCGAGG CGTTGCGAGCGATCCCTGCTGATCAGATCGCTGTTTATCCGGAGTACGACGGGTTGCGAGAAGCGGTGGTGGCCAATTTG AGCAATCGTGATCAAGGCCGACCAGGGCTGACCCAGCCACTTAGCCCTAGTCAGATTGGCTTATTCAACGGCGTTGATGC AGCGATTCACGCCATCTTTCATGCCTATGGCGATCGAGGCGATCAGCTGCTCACCACCAGCCCTACTTTTGGTTATTACA CGCCTTGCGCCCAGATGCAGGGGATGGAGATTTTGGCCATTCCCTATGAAGGCAGCGACTTTTGCTTTCCGCTTGAGGCG ATTCGTAAGCGTGTGCTGGAGCAGAAGCCAAGGCTGTTGGTGCTCTGCAATCCCAACAATCCCACTGGCACTCGCTTGGC ACCAGAACAGATTCAGCAACTTGCCATTGCTGCGCCTGAAACGTTGGTGGTAGTCGATGAGCTTTATGAGGCGTTCACGG GCGATAGCGTTTTGCCGCAAGCAGATTTCAGTGTTACCCCGAATCTGTTGGTGTTGCGTTCGCTGGCCAAAACCGCAGGT TTGGCGGGTCTTCGCATGGGGTTTGCGATCGGCTCTGCTGATGTCATCGATCGCGTCAGTCGTGTGACTGGGCCTTATGA CATCAATAGCTTTGCGGTAACAGCAGCTTTCGCGGCTCTTGATGATCAGGCTTACGTGGATGCCTACGTGGCTGATGTGT TGAAGGCGCGTGACTGGATTAGCGCTCGTCTTGAAGCCTCTGGTTTGCCTTACCACCTCGATGGAGGGAATTACCTGTTG ATCTGGCCGCAGCAGCAACCAGCAGAGGTGGAAGCAGCCTTACGCAAGCGGGGCATCTTGGTTCGGCTGATGACTGGTAA ACCGCTGATTGATGGATCCTTGCGGGTCAGCATCGGCACGATTGAGCAAATGCAGCAATTTTGGGAGAACTTTGCGGCGA TCGAGTCTGTTTAG
Upstream 100 bases:
>100_bases AACCATCTCGTAGCTGTCGCCTAGCGCTCTGCCGGCTCACGGCAGATACCCTAAAACTAGGGCTGTCGTTGTTGGGTATT CCCACGCTGGAGCGGATGTG
Downstream 100 bases:
>100_bases TCCCGCCCATGATCAGCAGCAGCAAAAGCCTGATGCAGAATTTGAATTGCTTTTGGAGTCATAATTACGGGCTGCAATGT CCCTGGCTGACACCCTTATT
Product: aminotransferases class-I
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase 1 [H]
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MGSSPARMSSGAPAPRVEVECLKAYSAPLEGRRGLLRLDFNENTIGPSPRVLEALRAIPADQIAVYPEYDGLREAVVANL SNRDQGRPGLTQPLSPSQIGLFNGVDAAIHAIFHAYGDRGDQLLTTSPTFGYYTPCAQMQGMEILAIPYEGSDFCFPLEA IRKRVLEQKPRLLVLCNPNNPTGTRLAPEQIQQLAIAAPETLVVVDELYEAFTGDSVLPQADFSVTPNLLVLRSLAKTAG LAGLRMGFAIGSADVIDRVSRVTGPYDINSFAVTAAFAALDDQAYVDAYVADVLKARDWISARLEASGLPYHLDGGNYLL IWPQQQPAEVEAALRKRGILVRLMTGKPLIDGSLRVSIGTIEQMQQFWENFAAIESV
Sequences:
>Translated_377_residues MGSSPARMSSGAPAPRVEVECLKAYSAPLEGRRGLLRLDFNENTIGPSPRVLEALRAIPADQIAVYPEYDGLREAVVANL SNRDQGRPGLTQPLSPSQIGLFNGVDAAIHAIFHAYGDRGDQLLTTSPTFGYYTPCAQMQGMEILAIPYEGSDFCFPLEA IRKRVLEQKPRLLVLCNPNNPTGTRLAPEQIQQLAIAAPETLVVVDELYEAFTGDSVLPQADFSVTPNLLVLRSLAKTAG LAGLRMGFAIGSADVIDRVSRVTGPYDINSFAVTAAFAALDDQAYVDAYVADVLKARDWISARLEASGLPYHLDGGNYLL IWPQQQPAEVEAALRKRGILVRLMTGKPLIDGSLRVSIGTIEQMQQFWENFAAIESV >Mature_376_residues GSSPARMSSGAPAPRVEVECLKAYSAPLEGRRGLLRLDFNENTIGPSPRVLEALRAIPADQIAVYPEYDGLREAVVANLS NRDQGRPGLTQPLSPSQIGLFNGVDAAIHAIFHAYGDRGDQLLTTSPTFGYYTPCAQMQGMEILAIPYEGSDFCFPLEAI RKRVLEQKPRLLVLCNPNNPTGTRLAPEQIQQLAIAAPETLVVVDELYEAFTGDSVLPQADFSVTPNLLVLRSLAKTAGL AGLRMGFAIGSADVIDRVSRVTGPYDINSFAVTAAFAALDDQAYVDAYVADVLKARDWISARLEASGLPYHLDGGNYLLI WPQQQPAEVEAALRKRGILVRLMTGKPLIDGSLRVSIGTIEQMQQFWENFAAIESV
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788332, Length=282, Percent_Identity=28.3687943262411, Blast_Score=109, Evalue=3e-25, Organism=Escherichia coli, GI1788722, Length=206, Percent_Identity=28.6407766990291, Blast_Score=65, Evalue=6e-12, Organism=Escherichia coli, GI1788627, Length=213, Percent_Identity=25.8215962441315, Blast_Score=63, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322075, Length=353, Percent_Identity=27.4787535410765, Blast_Score=110, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001917 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.9 [H]
Molecular weight: Translated: 40916; Mature: 40785
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: PS00105 AA_TRANSFER_CLASS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSSPARMSSGAPAPRVEVECLKAYSAPLEGRRGLLRLDFNENTIGPSPRVLEALRAIPA CCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCC DQIAVYPEYDGLREAVVANLSNRDQGRPGLTQPLSPSQIGLFNGVDAAIHAIFHAYGDRG CCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC DQLLTTSPTFGYYTPCAQMQGMEILAIPYEGSDFCFPLEAIRKRVLEQKPRLLVLCNPNN CEEEEECCCCCCCCCHHHHCCCEEEEEECCCCCCEECHHHHHHHHHHCCCCEEEEECCCC PTGTRLAPEQIQQLAIAAPETLVVVDELYEAFTGDSVLPQADFSVTPNLLVLRSLAKTAG CCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHC LAGLRMGFAIGSADVIDRVSRVTGPYDINSFAVTAAFAALDDQAYVDAYVADVLKARDWI HHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SARLEASGLPYHLDGGNYLLIWPQQQPAEVEAALRKRGILVRLMTGKPLIDGSLRVSIGT HHHHHCCCCCEEECCCCEEEEECCCCCHHHHHHHHHCCEEEEEECCCCEECCCEEEEEHH IEQMQQFWENFAAIESV HHHHHHHHHHHHHHHCC >Mature Secondary Structure GSSPARMSSGAPAPRVEVECLKAYSAPLEGRRGLLRLDFNENTIGPSPRVLEALRAIPA CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHCCCC DQIAVYPEYDGLREAVVANLSNRDQGRPGLTQPLSPSQIGLFNGVDAAIHAIFHAYGDRG CCEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC DQLLTTSPTFGYYTPCAQMQGMEILAIPYEGSDFCFPLEAIRKRVLEQKPRLLVLCNPNN CEEEEECCCCCCCCCHHHHCCCEEEEEECCCCCCEECHHHHHHHHHHCCCCEEEEECCCC PTGTRLAPEQIQQLAIAAPETLVVVDELYEAFTGDSVLPQADFSVTPNLLVLRSLAKTAG CCCCCCCHHHHHHHHHCCCCCEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHC LAGLRMGFAIGSADVIDRVSRVTGPYDINSFAVTAAFAALDDQAYVDAYVADVLKARDWI HHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH SARLEASGLPYHLDGGNYLLIWPQQQPAEVEAALRKRGILVRLMTGKPLIDGSLRVSIGT HHHHHCCCCCEEECCCCEEEEECCCCCHHHHHHHHHCCEEEEEECCCCEECCCEEEEEHH IEQMQQFWENFAAIESV HHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA