Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is 124024110

Identifier: 124024110

GI number: 124024110

Start: 2129779

End: 2131416

Strand: Reverse

Name: 124024110

Synonym: P9303_24191

Alternate gene names: NA

Gene position: 2131416-2129779 (Counterclockwise)

Preceding gene: 124024111

Following gene: 124024109

Centisome position: 79.45

GC content: 45.18

Gene sequence:

>1638_bases
ATGCAGCAGCTGCAGTCAGCAGTGCAGGCATATCAGGGTAGAGATCTTGACGGTGCTGAGGCAATTTTCAAGCAGATTCT
CGCTGTAAATCCAAAGGAGCCAACTGCGCTGCATCTCCTCGGTTGTATTTACAAAGATCGTGGACAACTCCAGCAGGCTG
TTGAGTTAATCCAGGCATCTATTCGAGAAGATGAGAGTAATCCAATTCCATTCTTTAATCTTGGCAAGATCCTTGCTATC
GCTGGTCAGCATGAGAATGCAGTGGGCGTCTTCCAGGAGTCATTGAAGAGAAACCAGCAGATCCCTGAAACGTGGTTTTG
CTTTGCCAATGCTCTGAGGGAGATTGGGAAAACAGAGGAAGCAAAGCGGGCATATCGAAATGCACTGCAATTAAATCCTG
CACATGCTGGAGCAGCAGGAAATTTAGGAGCACTGCTCACCGATGATGGTGAGTTGGATGAGGCTGAAAAGGTATTGAGA
AGGGCATTAGCGAGTAATCCTGAGGATATAAATTGCCTTGTAAATCTAGGCATTTTATTGAAGGAAGAGGGAGAGTTTGA
AGAAGCGATCGCAAGTTATCGGAAGGCGATTGAGGTGAAGCCTGATTTTGTAGATGCGTATTTGAATCTGGGGGGTGTGT
TGAAAGATGTTGGGAGGATGGATGAGGTGAGGCAAATTGTTGCGGCTCTTCGCCAGATGAAGTCTCTAGAGGATGAGACT
TTGGTCGCTATTCAAGATAAGACGTTAGTTTTTGATTGGCATCATAGAAGAGCTTTAAGTCTTTTCTGTGAAGTTGAGCT
TGCTGCTGCCTTTTCTGGAATGGAATCCTCCTCTCATTTTGATGCTGTAAAGCAAGTTGATGCTCTCTGCTTTCCTGCTT
CATTCCTAGGAGAGCAGATTGCTTGTGAAGAGGGCAAGCTGTTGTATGAAAAGGGGTATTTGGTTGACGAAGGTCTGGTT
TCCGCAGACTTATGTGCTCAGCTCATAAGTCAATTCAATAATCGGAATGAGCGGATGAGTGCTGCGCTTATTGAAACGGT
TTTGGCTGATGGTGTGTTGCGATCTGTTTTGGAGAGAATATCTTTGCACACGGGTTTCCCGCATTTGATTTGGAATTGTA
TATATTTCACCAAGGGTCCCGATGATGAGGCAGTGTCTGATGCTTGGCATTACGACAATCATTACAATGTTTGGACTCCA
AAGCTCATGATTTACCTTAATTCTCAGCGAGAAGAGGGTGGAGCTACGCATTTTGTTGACGCAGCTCTCTCGCGGCAAAT
ATCCGAGAAATCAGATTATATGGGTCTTGTCTTTCAGCGTGAATCTTATTCGGACCGAGTTAAAGGATTGGTTGAAGAGC
TAAATATTGATCCTGTCACGCTTGATCCTGAGCATTATGTCTTTTCTCCCGAGAGGGCAGGGTCGGGTGTCTGGTTTTGT
CCCGCCAGATCATTGCATCGAGGCGTCAGCCCTAAGAAAGGTGTTAGGCAAGTGCTTTCTTTTTCATTGACTCCTTTACC
CCGTGATTGCGGCTGGTCTGTTGATCAGTGTGTTGAGAAATCAATTGAAATTCTGAAGGATAAAATTGAAAAGGGTAGGC
AAAAAGATGATGTCAATCCCTATTGGACTGCTGCCTAG

Upstream 100 bases:

>100_bases
GATCGTAAGGGTCACTAGAGACCATTTGGCAGTGAAGAGGGGTAAGAAGTTGCCTTAAAATTGCATAAGCGAGAGATGCC
TGGTGAATCAAGAGGAGATC

Downstream 100 bases:

>100_bases
GGTGTCTATGCCTAAGCCAGAAAGCAAGCCAGTTTGGGAGTTATGGAGGCACTACCGCTGAGTTTCTTCTGCCGCCCTGC
CGAGGTAGTGGGACCAGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 545; Mature: 545

Protein sequence:

>545_residues
MQQLQSAVQAYQGRDLDGAEAIFKQILAVNPKEPTALHLLGCIYKDRGQLQQAVELIQASIREDESNPIPFFNLGKILAI
AGQHENAVGVFQESLKRNQQIPETWFCFANALREIGKTEEAKRAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLR
RALASNPEDINCLVNLGILLKEEGEFEEAIASYRKAIEVKPDFVDAYLNLGGVLKDVGRMDEVRQIVAALRQMKSLEDET
LVAIQDKTLVFDWHHRRALSLFCEVELAAAFSGMESSSHFDAVKQVDALCFPASFLGEQIACEEGKLLYEKGYLVDEGLV
SADLCAQLISQFNNRNERMSAALIETVLADGVLRSVLERISLHTGFPHLIWNCIYFTKGPDDEAVSDAWHYDNHYNVWTP
KLMIYLNSQREEGGATHFVDAALSRQISEKSDYMGLVFQRESYSDRVKGLVEELNIDPVTLDPEHYVFSPERAGSGVWFC
PARSLHRGVSPKKGVRQVLSFSLTPLPRDCGWSVDQCVEKSIEILKDKIEKGRQKDDVNPYWTAA

Sequences:

>Translated_545_residues
MQQLQSAVQAYQGRDLDGAEAIFKQILAVNPKEPTALHLLGCIYKDRGQLQQAVELIQASIREDESNPIPFFNLGKILAI
AGQHENAVGVFQESLKRNQQIPETWFCFANALREIGKTEEAKRAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLR
RALASNPEDINCLVNLGILLKEEGEFEEAIASYRKAIEVKPDFVDAYLNLGGVLKDVGRMDEVRQIVAALRQMKSLEDET
LVAIQDKTLVFDWHHRRALSLFCEVELAAAFSGMESSSHFDAVKQVDALCFPASFLGEQIACEEGKLLYEKGYLVDEGLV
SADLCAQLISQFNNRNERMSAALIETVLADGVLRSVLERISLHTGFPHLIWNCIYFTKGPDDEAVSDAWHYDNHYNVWTP
KLMIYLNSQREEGGATHFVDAALSRQISEKSDYMGLVFQRESYSDRVKGLVEELNIDPVTLDPEHYVFSPERAGSGVWFC
PARSLHRGVSPKKGVRQVLSFSLTPLPRDCGWSVDQCVEKSIEILKDKIEKGRQKDDVNPYWTAA
>Mature_545_residues
MQQLQSAVQAYQGRDLDGAEAIFKQILAVNPKEPTALHLLGCIYKDRGQLQQAVELIQASIREDESNPIPFFNLGKILAI
AGQHENAVGVFQESLKRNQQIPETWFCFANALREIGKTEEAKRAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLR
RALASNPEDINCLVNLGILLKEEGEFEEAIASYRKAIEVKPDFVDAYLNLGGVLKDVGRMDEVRQIVAALRQMKSLEDET
LVAIQDKTLVFDWHHRRALSLFCEVELAAAFSGMESSSHFDAVKQVDALCFPASFLGEQIACEEGKLLYEKGYLVDEGLV
SADLCAQLISQFNNRNERMSAALIETVLADGVLRSVLERISLHTGFPHLIWNCIYFTKGPDDEAVSDAWHYDNHYNVWTP
KLMIYLNSQREEGGATHFVDAALSRQISEKSDYMGLVFQRESYSDRVKGLVEELNIDPVTLDPEHYVFSPERAGSGVWFC
PARSLHRGVSPKKGVRQVLSFSLTPLPRDCGWSVDQCVEKSIEILKDKIEKGRQKDDVNPYWTAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 8 TPR repeats [H]

Homologues:

Organism=Homo sapiens, GI32307150, Length=306, Percent_Identity=29.4117647058824, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI32307148, Length=306, Percent_Identity=29.4117647058824, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI118766328, Length=203, Percent_Identity=27.0935960591133, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI118766330, Length=203, Percent_Identity=27.0935960591133, Blast_Score=89, Evalue=8e-18,
Organism=Homo sapiens, GI22749211, Length=121, Percent_Identity=36.3636363636364, Blast_Score=79, Evalue=2e-14,
Organism=Homo sapiens, GI301336134, Length=219, Percent_Identity=26.4840182648402, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI83415184, Length=219, Percent_Identity=26.4840182648402, Blast_Score=72, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI115532692, Length=240, Percent_Identity=25.8333333333333, Blast_Score=102, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI115532690, Length=240, Percent_Identity=25.8333333333333, Blast_Score=102, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI25147174, Length=202, Percent_Identity=25.2475247524752, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI17647755, Length=243, Percent_Identity=28.3950617283951, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24585827, Length=243, Percent_Identity=28.3950617283951, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24585829, Length=243, Percent_Identity=28.3950617283951, Blast_Score=100, Evalue=4e-21,
Organism=Drosophila melanogaster, GI24647123, Length=215, Percent_Identity=25.5813953488372, Blast_Score=88, Evalue=1e-17,
Organism=Drosophila melanogaster, GI281364285, Length=113, Percent_Identity=37.1681415929204, Blast_Score=77, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24581187, Length=113, Percent_Identity=37.1681415929204, Blast_Score=76, Evalue=5e-14,
Organism=Drosophila melanogaster, GI19920486, Length=137, Percent_Identity=29.9270072992701, Blast_Score=70, Evalue=5e-12,
Organism=Drosophila melanogaster, GI161076610, Length=137, Percent_Identity=29.9270072992701, Blast_Score=70, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000863
- InterPro:   IPR001440
- InterPro:   IPR011717
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00685 Sulfotransfer_1; PF00515 TPR_1; PF07721 TPR_4 [H]

EC number: NA

Molecular weight: Translated: 60948; Mature: 60948

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQLQSAVQAYQGRDLDGAEAIFKQILAVNPKEPTALHLLGCIYKDRGQLQQAVELIQAS
CHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IREDESNPIPFFNLGKILAIAGQHENAVGVFQESLKRNQQIPETWFCFANALREIGKTEE
HHCCCCCCCCCEECCHHHEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHH
AKRAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLRRALASNPEDINCLVNLGILL
HHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEHEEECCEEE
KEEGEFEEAIASYRKAIEVKPDFVDAYLNLGGVLKDVGRMDEVRQIVAALRQMKSLEDET
ECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LVAIQDKTLVFDWHHRRALSLFCEVELAAAFSGMESSSHFDAVKQVDALCFPASFLGEQI
EEEEECCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCCHH
ACEEGKLLYEKGYLVDEGLVSADLCAQLISQFNNRNERMSAALIETVLADGVLRSVLERI
CCCCCCEEEECCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SLHTGFPHLIWNCIYFTKGPDDEAVSDAWHYDNHYNVWTPKLMIYLNSQREEGGATHFVD
HHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEECCEEEEEEECCCCCCCCHHHHH
AALSRQISEKSDYMGLVFQRESYSDRVKGLVEELNIDPVTLDPEHYVFSPERAGSGVWFC
HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEECCCCCEECCCCCCCCEEEC
PARSLHRGVSPKKGVRQVLSFSLTPLPRDCGWSVDQCVEKSIEILKDKIEKGRQKDDVNP
CCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
YWTAA
CCCCC
>Mature Secondary Structure
MQQLQSAVQAYQGRDLDGAEAIFKQILAVNPKEPTALHLLGCIYKDRGQLQQAVELIQAS
CHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
IREDESNPIPFFNLGKILAIAGQHENAVGVFQESLKRNQQIPETWFCFANALREIGKTEE
HHCCCCCCCCCEECCHHHEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHH
AKRAYRNALQLNPAHAGAAGNLGALLTDDGELDEAEKVLRRALASNPEDINCLVNLGILL
HHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHHHCCCCCEEHEEECCEEE
KEEGEFEEAIASYRKAIEVKPDFVDAYLNLGGVLKDVGRMDEVRQIVAALRQMKSLEDET
ECCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE
LVAIQDKTLVFDWHHRRALSLFCEVELAAAFSGMESSSHFDAVKQVDALCFPASFLGEQI
EEEEECCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCCHH
ACEEGKLLYEKGYLVDEGLVSADLCAQLISQFNNRNERMSAALIETVLADGVLRSVLERI
CCCCCCEEEECCCEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SLHTGFPHLIWNCIYFTKGPDDEAVSDAWHYDNHYNVWTPKLMIYLNSQREEGGATHFVD
HHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCEECCEEEEEEECCCCCCCCHHHHH
AALSRQISEKSDYMGLVFQRESYSDRVKGLVEELNIDPVTLDPEHYVFSPERAGSGVWFC
HHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHCCCCCEEECCCCCEECCCCCCCCEEEC
PARSLHRGVSPKKGVRQVLSFSLTPLPRDCGWSVDQCVEKSIEILKDKIEKGRQKDDVNP
CCHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
YWTAA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9537320 [H]