Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124024068

Identifier: 124024068

GI number: 124024068

Start: 2094786

End: 2096402

Strand: Reverse

Name: 124024068

Synonym: P9303_23771

Alternate gene names: NA

Gene position: 2096402-2094786 (Counterclockwise)

Preceding gene: 124024072

Following gene: 124024064

Centisome position: 78.15

GC content: 54.85

Gene sequence:

>1617_bases
ATGGGTTCCGCTTCATCCTTTGAGGTTTCTAGAGGATTTTCCTCGCAGGTAGAGGAGCGTGTGCTGCTGGTGAGGTTGCC
CTGCAATCCCATCTTTCCAATTGGGCCGATTTACCTGGCCGATCACCTGCACAAGTGTTTCCCGGATCTTCCTCAACGGA
TTTTGGATTTGGCTGCTTTGCCTGTCCTGGATGTTGAACGGGTGTTGTTGGCCACGATTGATCAGTTTCGCCCCACCCTG
CTGGTTTTTTCTTGGAGAGATATCCAGATCTATGCACCGGTGGATGGTCGCACTGGCAATCCGCTGCAGCACTCCTTTGA
GGTGTTTTATGCAAGTAATCCTTTGCGACGCCTCCGGGGCGCCTTCGGTGGATTGTTGTTGATGAAAAGCCATTACGGAG
AGCTCTGGCGCAATCAGCGACTTGTGCGACATGGGCTGCGAGCTGCTCGTCGCCATGTCAGCCATGCCCGGGCTGTCTTG
GGTGGTGGTGCAGTGAGTGTGTTCTATGAGCAACTTGGCCGCTCTTTGCCGAAGGGCACCATCGTGTCGTTGGGGGAAGG
GGAGCCCCTATTGGAGAATTTGCTGCGCGGCGTTTCCCTGAATGATCAACGCTGTTTTGTGGTGGGTGAGCCAGTGCGAG
CTGGTCTGATTCATGAGCAGCCTGAAAGTCGTCCTAAAACCGCCTGCGATTACGACTACATCTCATCGATATGGCCTCAG
TTGAATTGGTACCTAGAGGGTGGTGACTTCTACGTCGGTGTACAGACCAAGCGGGGTTGTCCCCACAATTGTTGCTATTG
CGTTTACACCGTTGTGGAGGGGAAACAGGTACGGCTCAATCCTGTCAAAGAGGTGGTGGCGGAGATGCGCCAGCTTTATG
ACCGTGGCGTACGTGGCTTTTGGTTCACTGATGCACAGTTCATCCCCGCCCGCCGATACATTGAGGATGCCAAAAATCTT
CTGACGGCGATCAAGGCTGAAGGGCTCAATGGAATTCGTTGGGCCGCCTACATCCGTGCAGACAACCTTGATGCCGAGCT
TGCGGAGTTGATGGTGGCAACCGGCATGAGTTACTTCGAGATTGGCATTACCTCAGGGTCTCAGGAGCTAGTGCGCAAGA
TGCGCATGGGGTACAACCTGCGCACTGTGCTTGAGAACTGTCGGCTGTTAGTCCGCGCTGGCTTCCGCCAACACGTGTCG
GTGAACTACTCCTTCAACGTGATTGACGAAAGACCGGAAACGATTCGTCAATCCATCGCCTATCACCGCGAGCTGGAACG
GATTTTCGGGCCCGACAAGGTGGAGCCTGCCATCTTTTTCATTGGCCTCCAACCTCACACCCATCTGGAGCAGTATGGCT
TTGAACAGGGTTTGATTCAACCCGGCTACAACCCCATGAGCATGATGCCCTGGACGGCTAGGAAGCTGCTCTGGAACCCT
GAACCGATGGGAAGTATTTTCGGAAGAATCTGTCTCGAGGCTTTTGAGACTGAGCCTGGCAATTTCGGACGTACCGTGAT
GGCCTTGCTTGAGCGGGATTACGGGGTGGCGCCTTTGGAGGAGGCTCTACGGGCTCCAGTGATGGGGCGGGCGGCCTTAG
CTAATGCCGTGAGCTGA

Upstream 100 bases:

>100_bases
CAGAGACAACGGCTTGACTGATTAGCGCTTAGGAGAAGCGCAGTCATTGTTAGCGTCGCTTTCAGCTTGAGCAATCGCTG
AGATCCTGCGCTCTTGATCA

Downstream 100 bases:

>100_bases
TAGACGAGTAAGGCAGCCATCGCCAGGATGCCGACCACTCCACCGAGGGGGTTGTCAGCTGGCCCGGTGAGCCAAAGCGG
CGACTTAGGGGAAAATTGGA

Product: Fe-S oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 538; Mature: 537

Protein sequence:

>538_residues
MGSASSFEVSRGFSSQVEERVLLVRLPCNPIFPIGPIYLADHLHKCFPDLPQRILDLAALPVLDVERVLLATIDQFRPTL
LVFSWRDIQIYAPVDGRTGNPLQHSFEVFYASNPLRRLRGAFGGLLLMKSHYGELWRNQRLVRHGLRAARRHVSHARAVL
GGGAVSVFYEQLGRSLPKGTIVSLGEGEPLLENLLRGVSLNDQRCFVVGEPVRAGLIHEQPESRPKTACDYDYISSIWPQ
LNWYLEGGDFYVGVQTKRGCPHNCCYCVYTVVEGKQVRLNPVKEVVAEMRQLYDRGVRGFWFTDAQFIPARRYIEDAKNL
LTAIKAEGLNGIRWAAYIRADNLDAELAELMVATGMSYFEIGITSGSQELVRKMRMGYNLRTVLENCRLLVRAGFRQHVS
VNYSFNVIDERPETIRQSIAYHRELERIFGPDKVEPAIFFIGLQPHTHLEQYGFEQGLIQPGYNPMSMMPWTARKLLWNP
EPMGSIFGRICLEAFETEPGNFGRTVMALLERDYGVAPLEEALRAPVMGRAALANAVS

Sequences:

>Translated_538_residues
MGSASSFEVSRGFSSQVEERVLLVRLPCNPIFPIGPIYLADHLHKCFPDLPQRILDLAALPVLDVERVLLATIDQFRPTL
LVFSWRDIQIYAPVDGRTGNPLQHSFEVFYASNPLRRLRGAFGGLLLMKSHYGELWRNQRLVRHGLRAARRHVSHARAVL
GGGAVSVFYEQLGRSLPKGTIVSLGEGEPLLENLLRGVSLNDQRCFVVGEPVRAGLIHEQPESRPKTACDYDYISSIWPQ
LNWYLEGGDFYVGVQTKRGCPHNCCYCVYTVVEGKQVRLNPVKEVVAEMRQLYDRGVRGFWFTDAQFIPARRYIEDAKNL
LTAIKAEGLNGIRWAAYIRADNLDAELAELMVATGMSYFEIGITSGSQELVRKMRMGYNLRTVLENCRLLVRAGFRQHVS
VNYSFNVIDERPETIRQSIAYHRELERIFGPDKVEPAIFFIGLQPHTHLEQYGFEQGLIQPGYNPMSMMPWTARKLLWNP
EPMGSIFGRICLEAFETEPGNFGRTVMALLERDYGVAPLEEALRAPVMGRAALANAVS
>Mature_537_residues
GSASSFEVSRGFSSQVEERVLLVRLPCNPIFPIGPIYLADHLHKCFPDLPQRILDLAALPVLDVERVLLATIDQFRPTLL
VFSWRDIQIYAPVDGRTGNPLQHSFEVFYASNPLRRLRGAFGGLLLMKSHYGELWRNQRLVRHGLRAARRHVSHARAVLG
GGAVSVFYEQLGRSLPKGTIVSLGEGEPLLENLLRGVSLNDQRCFVVGEPVRAGLIHEQPESRPKTACDYDYISSIWPQL
NWYLEGGDFYVGVQTKRGCPHNCCYCVYTVVEGKQVRLNPVKEVVAEMRQLYDRGVRGFWFTDAQFIPARRYIEDAKNLL
TAIKAEGLNGIRWAAYIRADNLDAELAELMVATGMSYFEIGITSGSQELVRKMRMGYNLRTVLENCRLLVRAGFRQHVSV
NYSFNVIDERPETIRQSIAYHRELERIFGPDKVEPAIFFIGLQPHTHLEQYGFEQGLIQPGYNPMSMMPWTARKLLWNPE
PMGSIFGRICLEAFETEPGNFGRTVMALLERDYGVAPLEEALRAPVMGRAALANAVS

Specific function: Unknown

COG id: COG1032

COG function: function code C; Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 B12-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006158
- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR007197 [H]

Pfam domain/function: PF02310 B12-binding; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 60832; Mature: 60701

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSASSFEVSRGFSSQVEERVLLVRLPCNPIFPIGPIYLADHLHKCFPDLPQRILDLAAL
CCCCCCCCHHCCCHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
PVLDVERVLLATIDQFRPTLLVFSWRDIQIYAPVDGRTGNPLQHSFEVFYASNPLRRLRG
CHHHHHHHHHHHHHHCCCEEEEEEECEEEEEECCCCCCCCCCHHCEEEEECCCHHHHHHH
AFGGLLLMKSHYGELWRNQRLVRHGLRAARRHVSHARAVLGGGAVSVFYEQLGRSLPKGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
IVSLGEGEPLLENLLRGVSLNDQRCFVVGEPVRAGLIHEQPESRPKTACDYDYISSIWPQ
EEECCCCCHHHHHHHHCCCCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHHHCCC
LNWYLEGGDFYVGVQTKRGCPHNCCYCVYTVVEGKQVRLNPVKEVVAEMRQLYDRGVRGF
EEEEEECCCEEEEEECCCCCCCCCEEEEEEEECCCEEEECHHHHHHHHHHHHHHCCCCEE
WFTDAQFIPARRYIEDAKNLLTAIKAEGLNGIRWAAYIRADNLDAELAELMVATGMSYFE
EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCEEE
IGITSGSQELVRKMRMGYNLRTVLENCRLLVRAGFRQHVSVNYSFNVIDERPETIRQSIA
EEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHEEEEEEEEEEECCCHHHHHHHHH
YHRELERIFGPDKVEPAIFFIGLQPHTHLEQYGFEQGLIQPGYNPMSMMPWTARKLLWNP
HHHHHHHHCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
EPMGSIFGRICLEAFETEPGNFGRTVMALLERDYGVAPLEEALRAPVMGRAALANAVS
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHCCC
>Mature Secondary Structure 
GSASSFEVSRGFSSQVEERVLLVRLPCNPIFPIGPIYLADHLHKCFPDLPQRILDLAAL
CCCCCCCHHCCCHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
PVLDVERVLLATIDQFRPTLLVFSWRDIQIYAPVDGRTGNPLQHSFEVFYASNPLRRLRG
CHHHHHHHHHHHHHHCCCEEEEEEECEEEEEECCCCCCCCCCHHCEEEEECCCHHHHHHH
AFGGLLLMKSHYGELWRNQRLVRHGLRAARRHVSHARAVLGGGAVSVFYEQLGRSLPKGT
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
IVSLGEGEPLLENLLRGVSLNDQRCFVVGEPVRAGLIHEQPESRPKTACDYDYISSIWPQ
EEECCCCCHHHHHHHHCCCCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCHHHHHHHCCC
LNWYLEGGDFYVGVQTKRGCPHNCCYCVYTVVEGKQVRLNPVKEVVAEMRQLYDRGVRGF
EEEEEECCCEEEEEECCCCCCCCCEEEEEEEECCCEEEECHHHHHHHHHHHHHHCCCCEE
WFTDAQFIPARRYIEDAKNLLTAIKAEGLNGIRWAAYIRADNLDAELAELMVATGMSYFE
EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHCCCCEEE
IGITSGSQELVRKMRMGYNLRTVLENCRLLVRAGFRQHVSVNYSFNVIDERPETIRQSIA
EEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHEEEEEEEEEEECCCHHHHHHHHH
YHRELERIFGPDKVEPAIFFIGLQPHTHLEQYGFEQGLIQPGYNPMSMMPWTARKLLWNP
HHHHHHHHCCCCCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCC
EPMGSIFGRICLEAFETEPGNFGRTVMALLERDYGVAPLEEALRAPVMGRAALANAVS
CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]