| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024072
Identifier: 124024072
GI number: 124024072
Start: 2098009
End: 2098845
Strand: Reverse
Name: 124024072
Synonym: P9303_23811
Alternate gene names: NA
Gene position: 2098845-2098009 (Counterclockwise)
Preceding gene: 124024073
Following gene: 124024068
Centisome position: 78.24
GC content: 54.6
Gene sequence:
>837_bases ATGTCTCAGCTAACCATCAAGCTCAGCGTTAAAGCCGATGCTCTGATCGCACAGCTTCAGAAGGAGATCTTTAATCGTCG CCGTAAGAAGGTCAGCGCAGCTGGAGTGGTGGAAACCTTGGTCGAAAGCGGTGCCAAGTCTCAGTCGGACAAGCGCTTTG CGACGTCCTGGATCAATTTGATCAAGGACATCGAAAAGGCTGCCAAGCTCGCCAATACCCATGGCAGCAAGCCTTCAAAT CTCACTGCTGATGAGTGGGCCATGGTGTTGACTCATCGCAGTCGTGGTCCAGTTAAATCAACGAGTAAGACTCCTGCAAA GAAGGTCTCTAGTGGAAAGTCCGCAGAGAAATCCAGTACGACTAAGGCTTCGACGACCAAAGCCCCCGCAAGGAAGGCTT CGACGACCAAAGCCCCCGCAAGGAAGGCTTCGACGACCAAAGCCCCCGCAAGGAAGGCTTCGACGACCAAAGCCTCTGCT GCTAAAGCCCCTGCAAAGAAAGCCTCTGCTGCTAAAGCCCCTGCAAAGAAAGCCTCTGCTGCTAAAGCCCCTGCAAAGAA AGCCTCTGCTGCTAAAGCCCCTGCAAAGAAAGCCTCTGCTGTTAAAGCCCCCGCGAAGAAAACCTCTGCTGCCAAGGCCT CCGCGAAGAAGTCTTCCAGCACATCAGTTGGCACGTCGCGACCAGCTCGCCGTGCACGCAAAGCTAGTGGGAGCAAAAGT ATTGTTGCCTCCACGTCTGTAGCAAAACGCATGGCGAAGGCCGCTGGTCGTCTCGGGACCTCTGTCGTTAGCTCGGCGGT TGGCGCCAACGGTAGCGTTCCATTAGAGATCAAATGA
Upstream 100 bases:
>100_bases TTGAAGGCTTGTTTGAAGCCTCCGGCAACGACAGGCTAACTTCGACTATTTGTTGACATTCGGTTGAGATGCTACATATA AGATAGCTATTTATTCTTCA
Downstream 100 bases:
>100_bases GCACTTGATGCTTGGAGGTGACTGGCCTGATCCAGTGCCTCCGTTTTGTCTTTTAAGGCCTCGGGCGAATGGGTAAAAAC CAACGGTTTTGCCAGTCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 278; Mature: 277
Protein sequence:
>278_residues MSQLTIKLSVKADALIAQLQKEIFNRRRKKVSAAGVVETLVESGAKSQSDKRFATSWINLIKDIEKAAKLANTHGSKPSN LTADEWAMVLTHRSRGPVKSTSKTPAKKVSSGKSAEKSSTTKASTTKAPARKASTTKAPARKASTTKAPARKASTTKASA AKAPAKKASAAKAPAKKASAAKAPAKKASAAKAPAKKASAVKAPAKKTSAAKASAKKSSSTSVGTSRPARRARKASGSKS IVASTSVAKRMAKAAGRLGTSVVSSAVGANGSVPLEIK
Sequences:
>Translated_278_residues MSQLTIKLSVKADALIAQLQKEIFNRRRKKVSAAGVVETLVESGAKSQSDKRFATSWINLIKDIEKAAKLANTHGSKPSN LTADEWAMVLTHRSRGPVKSTSKTPAKKVSSGKSAEKSSTTKASTTKAPARKASTTKAPARKASTTKAPARKASTTKASA AKAPAKKASAAKAPAKKASAAKAPAKKASAAKAPAKKASAVKAPAKKTSAAKASAKKSSSTSVGTSRPARRARKASGSKS IVASTSVAKRMAKAAGRLGTSVVSSAVGANGSVPLEIK >Mature_277_residues SQLTIKLSVKADALIAQLQKEIFNRRRKKVSAAGVVETLVESGAKSQSDKRFATSWINLIKDIEKAAKLANTHGSKPSNL TADEWAMVLTHRSRGPVKSTSKTPAKKVSSGKSAEKSSTTKASTTKAPARKASTTKAPARKASTTKAPARKASTTKASAA KAPAKKASAAKAPAKKASAAKAPAKKASAAKAPAKKASAVKAPAKKTSAAKASAKKSSSTSVGTSRPARRARKASGSKSI VASTSVAKRMAKAAGRLGTSVVSSAVGANGSVPLEIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28311; Mature: 28180
Theoretical pI: Translated: 12.19; Mature: 12.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQLTIKLSVKADALIAQLQKEIFNRRRKKVSAAGVVETLVESGAKSQSDKRFATSWINL CCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IKDIEKAAKLANTHGSKPSNLTADEWAMVLTHRSRGPVKSTSKTPAKKVSSGKSAEKSST HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHCC TKASTTKAPARKASTTKAPARKASTTKAPARKASTTKASAAKAPAKKASAAKAPAKKASA CCCHHCCCCHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHH AKAPAKKASAAKAPAKKASAVKAPAKKTSAAKASAKKSSSTSVGTSRPARRARKASGSKS HHCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCH IVASTSVAKRMAKAAGRLGTSVVSSAVGANGSVPLEIK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC >Mature Secondary Structure SQLTIKLSVKADALIAQLQKEIFNRRRKKVSAAGVVETLVESGAKSQSDKRFATSWINL CCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH IKDIEKAAKLANTHGSKPSNLTADEWAMVLTHRSRGPVKSTSKTPAKKVSSGKSAEKSST HHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCHHHCC TKASTTKAPARKASTTKAPARKASTTKAPARKASTTKASAAKAPAKKASAAKAPAKKASA CCCHHCCCCHHHCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCHHHHHH AKAPAKKASAAKAPAKKASAVKAPAKKTSAAKASAKKSSSTSVGTSRPARRARKASGSKS HHCCHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCH IVASTSVAKRMAKAAGRLGTSVVSSAVGANGSVPLEIK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA