| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124024064
Identifier: 124024064
GI number: 124024064
Start: 2091350
End: 2092219
Strand: Reverse
Name: 124024064
Synonym: P9303_23731
Alternate gene names: NA
Gene position: 2092219-2091350 (Counterclockwise)
Preceding gene: 124024068
Following gene: 124024063
Centisome position: 77.99
GC content: 57.24
Gene sequence:
>870_bases ATGACCGTCGCCTCACCCCGTCTGGAGCCGGTGGATTTCGACAGCCTGGTCAATGCCGGGATCAATCGCCCTGCCCGTTA CATGGGCCACGAGTTGGGGGTGGAGCCTCGTGATTGGCAGGCCTCTCGGGTGCGCTGGGCTCTCTCCTACCCGGAGATCT ACGAGGTGGGCGGGAGCAATCAGGGCCACATCATTCTTTATTCGATTCTCAACGCAGTTCCAGGTCAGCTTTGTGACAGG GCCTATCTTCCTGCTCAGGACCTGGCCCAGCGCTTGAGGGACCTTCGGCAGCCTCTGTTCGCGGTGGAGAGTCGCCGTCC TCTCCAGGCCTTCGACATCCTTGGCTTCAGCCTCTGTTATGAGCTTGGGGCCACAAACATCCTTGAGATGCTTGATCTGG CAGAGATTCCTTTGTTGGCAAGCGACCGTGGTCATCAGCCCCTAAATGATCTAGCGGCACCACCATTGATCTTTGCTGGC GGACCAACGGCTACCAGTAACCCTGAGCCCTATGCCGCTTTTTTTGATTTTGTAGCCCTTGGCGATGGTGAAGAGCTGCT GCCTGAGATTGGTTTGGTAGTGGCTGACGCTAAGGCCAATGGACTGAGTCGCTCAAGCCTTTTGCAGGACTTAGCTCAGG TGCCTGGCGTTTACGTGCCGTCGCTTTACGGTCAAGGCTCTGATGGCACCTCCATCGTTCCTTTGGAGCCTGCTGCGCCG GCCAAGATTCTGCGTCTGGAGGCAAGCATTGATTCGATGGGCCGTAGCCTTAAACCTGTTCAGGTGCAGCATTGGCTTGC AGAGCAGATGGGTGAGTCCTTGCGCATGACCGGTGTGCAAAGGCAGGAACTCAAGTTGCTGCGGTGTTAG
Upstream 100 bases:
>100_bases TGGCTGTCTTGGCAGGCATCTTGCTACGTCACGGGACCTTGCGCTGTGTCGGGGGGTTGGCCAGCGTTGTCCATACGATG GGATTAGTGCCCTGCTGGCC
Downstream 100 bases:
>100_bases AGTCAAAATATGACGTGAATGCAGGGGCAATTTTTGCCACTGGTCCGTCCCGGCCTTCTTCACTCCAATTCTGAGCAAAG CGAGGCTATTTGCTGCTCGT
Product: hypothetical protein
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein; Fe-S Oxidoreductase; Radical SAM Family Protein; Elongator /MiaB/NifB; Radical Sam Domain Protein; Fe-S Oxidoreductas; Oxidoreductase; Radical Sam-Superfamily Protein; Fe-S Oxidoreductase Family Protein; Radical Sam Protein; Radical SAM Superfamily Protein; Fe-S Oxidoreductases Family Protein; Fe-S Oxidoreductase Family; Radical SAM
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MTVASPRLEPVDFDSLVNAGINRPARYMGHELGVEPRDWQASRVRWALSYPEIYEVGGSNQGHIILYSILNAVPGQLCDR AYLPAQDLAQRLRDLRQPLFAVESRRPLQAFDILGFSLCYELGATNILEMLDLAEIPLLASDRGHQPLNDLAAPPLIFAG GPTATSNPEPYAAFFDFVALGDGEELLPEIGLVVADAKANGLSRSSLLQDLAQVPGVYVPSLYGQGSDGTSIVPLEPAAP AKILRLEASIDSMGRSLKPVQVQHWLAEQMGESLRMTGVQRQELKLLRC
Sequences:
>Translated_289_residues MTVASPRLEPVDFDSLVNAGINRPARYMGHELGVEPRDWQASRVRWALSYPEIYEVGGSNQGHIILYSILNAVPGQLCDR AYLPAQDLAQRLRDLRQPLFAVESRRPLQAFDILGFSLCYELGATNILEMLDLAEIPLLASDRGHQPLNDLAAPPLIFAG GPTATSNPEPYAAFFDFVALGDGEELLPEIGLVVADAKANGLSRSSLLQDLAQVPGVYVPSLYGQGSDGTSIVPLEPAAP AKILRLEASIDSMGRSLKPVQVQHWLAEQMGESLRMTGVQRQELKLLRC >Mature_288_residues TVASPRLEPVDFDSLVNAGINRPARYMGHELGVEPRDWQASRVRWALSYPEIYEVGGSNQGHIILYSILNAVPGQLCDRA YLPAQDLAQRLRDLRQPLFAVESRRPLQAFDILGFSLCYELGATNILEMLDLAEIPLLASDRGHQPLNDLAAPPLIFAGG PTATSNPEPYAAFFDFVALGDGEELLPEIGLVVADAKANGLSRSSLLQDLAQVPGVYVPSLYGQGSDGTSIVPLEPAAPA KILRLEASIDSMGRSLKPVQVQHWLAEQMGESLRMTGVQRQELKLLRC
Specific function: Unknown
COG id: COG1032
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31511; Mature: 31380
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVASPRLEPVDFDSLVNAGINRPARYMGHELGVEPRDWQASRVRWALSYPEIYEVGGSN CCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHEEEEECCCHHHCCCCCC QGHIILYSILNAVPGQLCDRAYLPAQDLAQRLRDLRQPLFAVESRRPLQAFDILGFSLCY CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ELGATNILEMLDLAEIPLLASDRGHQPLNDLAAPPLIFAGGPTATSNPEPYAAFFDFVAL HHCHHHHHHHHHHHHCCEECCCCCCCCHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHC GDGEELLPEIGLVVADAKANGLSRSSLLQDLAQVPGVYVPSLYGQGSDGTSIVPLEPAAP CCCHHHHHHHCEEEECCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCEEEECCCCCC AKILRLEASIDSMGRSLKPVQVQHWLAEQMGESLRMTGVQRQELKLLRC HHHEEEHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHCCCCHHHHHHHCC >Mature Secondary Structure TVASPRLEPVDFDSLVNAGINRPARYMGHELGVEPRDWQASRVRWALSYPEIYEVGGSN CCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHEEEEECCCHHHCCCCCC QGHIILYSILNAVPGQLCDRAYLPAQDLAQRLRDLRQPLFAVESRRPLQAFDILGFSLCY CCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH ELGATNILEMLDLAEIPLLASDRGHQPLNDLAAPPLIFAGGPTATSNPEPYAAFFDFVAL HHCHHHHHHHHHHHHCCEECCCCCCCCHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHC GDGEELLPEIGLVVADAKANGLSRSSLLQDLAQVPGVYVPSLYGQGSDGTSIVPLEPAAP CCCHHHHHHHCEEEECCCCCCCCHHHHHHHHHHCCCEECCCCCCCCCCCCEEEECCCCCC AKILRLEASIDSMGRSLKPVQVQHWLAEQMGESLRMTGVQRQELKLLRC HHHEEEHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHCCCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA