| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023606
Identifier: 124023606
GI number: 124023606
Start: 1667500
End: 1669713
Strand: Reverse
Name: 124023606
Synonym: P9303_19061
Alternate gene names: NA
Gene position: 1669713-1667500 (Counterclockwise)
Preceding gene: 124023614
Following gene: 124023605
Centisome position: 62.24
GC content: 37.22
Gene sequence:
>2214_bases ATGAATTCATACGATGTCATCATAGTTGGAGGTGGATGTGCTGGATTATCCGCTTTAAGCACTTTAGCTAATTATCGGAC TTTATTAATAGAGAAAAACTCATCTTTAGGAGGTCGTGTTAACTCAATAAACCTAGAAGATGCCTCTGCTGAGTTAGGAG CATTATATTCCTTGGAACCGATGCTGCAATTTAATTCTATATCACAAACAGCATGCTTGGATAACATTAATGGCAACGCT CAACACTCATCTATCTTATTTATAATATCTCACTCTCTTCAGTTCGAGTCATTTTCACCCATCGAAGCCTTTGACAGGCT TGCCATCGCAAATCAATCTCAACAAAGTACTAGCTTTTATAAGCGAGTCATAAAAACAAACTCTAGATCAGAACCCACAA TCACTAACCCCAACTTTGGCAGGCTTGATTTACTTTCACCTGACCAGTTAAGCCTTGTTGCTTCACTTTTTCAAGTTACT CACCCAGGATCAATTTATGACTGTATTCCATCATTAAGACCATTATGCTTAAATAATTTCCCTTCTTTGACTCGAACGCA AACCAACCAATCAGTTTTGATGAATCTTTTTAGAGTACCTAGCAACGCTCAGGTAGCTTTGTCAAGTAATATAATAAGTT TAACCGAACTCAACTCATCAGTTGAGGTCAAGTTTGAAAACAATGATCAATGCATTTCTGCCCAAGCAAAATCGGTGATT GTTACTCCACCACCGGCCTCTATTTTTCCGTTTATAAAATCTATCAGACCTCAAAGCCTTAATTTTTACCATTCCGCGCC ATATATCAGCGGATATTCTTTCGTCTTTCTTTTTATTGGACCTATTCCAGCGCAATCAGCATTTGTGTCTTCTATCCATA TATGGAGTGTTTGTTTTTTTACACGAGTTGACGATTCTAGATTTATTGTTAATTGCTATGTCCCATCAAACCGTTTTGGT CAGTTTTCAGCAAAACCTTCCGAGCATGAATTGGCCTCCTCTCTTAAACCCTATCTTTCAGATTCTTGCGTACTGCTGCA ATCTCGCTCTAAGTTTTGGAGATATCTCGCTCCAGTTCTATCAGATCTTTTAGTTGATAGATACTTTCAAGAACATTATG TACTCTCAAATAGGATTTTTTATGGAGGCGAACTTTCAACCTTTACTCCTGATAACTTAAACGCTTACGGAACCCATAAT GCCATCAAAGCTGGCGAAACTGTTGCTAACTTTACCATTGATACTATTTCCTCCTCTCACCGTTTTATCAATTTTAGGCC ATTACCTCCCTTGTTAAATGCTCACGTTTTTACCTTCAATCAACAAATACCTAAATATTTAGGCTCACAGCCAGAAGGTA ACGTTGCTTTTTATGGCTTACTATTGTCTGCTTTTAAAGAACAATCTATTAAGTCATATCTTCTTAAAGCTTCTGTTGAA GGATTATGGGAATATAATCATGGATTTGGCGTTACTTTAGAGGATTCACTTCTTGTTCTCGAGGGGCTGATTGATAACGG TTTGCCGAAGCATCACATTAAACGTATTCTCAACCTCTGCATTGACAAATTTTATGACACAACAACTGGTTTATTTGTAA CGGTAAAAAAAGGTCGCTCTAGTTACTGGCAAGGACCCTCTATTCATGGAACTGCCCAGATATCGTATCTAATTCTAAAA CACTTCAACTTGTCCGATTCGTTACTAGATAGCCAAAAGATCTTGGATTTTTTGTCAGCCAGTGTAACCTCAGACTCTCT TTGGAAAAGTCGTTGGTTTACTAATTCTTATTTTACCAGTTTTTATGTCGTTAGGCTTTTAATGTTTCTGCCAGATGATC ACACGACTTATTTATTATTGTCACGTTACTATGAACGGATTCTTCAATCACAAGTTTCAAATGGCTCATGGGAGGACTCC CCAATATCTACCTCTTCTGTAATTCTAACTCTTGCTTTATATCACAACTCCTTGCCTATTACCTTATCCAATGAAATAAA GAATTCTCTGATAAAAGCAATTAATTACCTAAGGCAATTTCAGGGGCAAGAATGTTTTCCATCCGAACCTCTACTTTATT ATTGGTATGATATTTCTGAAATTGATGATCAATTTACTAAAAGATTTTACCATTGTATGGACAAAGGCAGGATCTCAGCT GCTTTAGCATCTTTAGCGCTCCAATCCGCCTCTAGCTATATAGTAGATAAGTGA
Upstream 100 bases:
>100_bases CTAAAATTACATCTTGACAGTTCTCCATTGCAATAATAATTTTCTTAGCATGGCCCTATATTCATCCTTTTTGATTTCTT AGTCATTTCAATCAAATCTT
Downstream 100 bases:
>100_bases GAAAAAGAACACATTTTTCTGTCTCTTCAGTTAATATTAGGTAGCTATAGCATTCCCATTGCAGTCAGCTTGATCATTTA TCAGGTTTTAATATTTAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 737; Mature: 737
Protein sequence:
>737_residues MNSYDVIIVGGGCAGLSALSTLANYRTLLIEKNSSLGGRVNSINLEDASAELGALYSLEPMLQFNSISQTACLDNINGNA QHSSILFIISHSLQFESFSPIEAFDRLAIANQSQQSTSFYKRVIKTNSRSEPTITNPNFGRLDLLSPDQLSLVASLFQVT HPGSIYDCIPSLRPLCLNNFPSLTRTQTNQSVLMNLFRVPSNAQVALSSNIISLTELNSSVEVKFENNDQCISAQAKSVI VTPPPASIFPFIKSIRPQSLNFYHSAPYISGYSFVFLFIGPIPAQSAFVSSIHIWSVCFFTRVDDSRFIVNCYVPSNRFG QFSAKPSEHELASSLKPYLSDSCVLLQSRSKFWRYLAPVLSDLLVDRYFQEHYVLSNRIFYGGELSTFTPDNLNAYGTHN AIKAGETVANFTIDTISSSHRFINFRPLPPLLNAHVFTFNQQIPKYLGSQPEGNVAFYGLLLSAFKEQSIKSYLLKASVE GLWEYNHGFGVTLEDSLLVLEGLIDNGLPKHHIKRILNLCIDKFYDTTTGLFVTVKKGRSSYWQGPSIHGTAQISYLILK HFNLSDSLLDSQKILDFLSASVTSDSLWKSRWFTNSYFTSFYVVRLLMFLPDDHTTYLLLSRYYERILQSQVSNGSWEDS PISTSSVILTLALYHNSLPITLSNEIKNSLIKAINYLRQFQGQECFPSEPLLYYWYDISEIDDQFTKRFYHCMDKGRISA ALASLALQSASSYIVDK
Sequences:
>Translated_737_residues MNSYDVIIVGGGCAGLSALSTLANYRTLLIEKNSSLGGRVNSINLEDASAELGALYSLEPMLQFNSISQTACLDNINGNA QHSSILFIISHSLQFESFSPIEAFDRLAIANQSQQSTSFYKRVIKTNSRSEPTITNPNFGRLDLLSPDQLSLVASLFQVT HPGSIYDCIPSLRPLCLNNFPSLTRTQTNQSVLMNLFRVPSNAQVALSSNIISLTELNSSVEVKFENNDQCISAQAKSVI VTPPPASIFPFIKSIRPQSLNFYHSAPYISGYSFVFLFIGPIPAQSAFVSSIHIWSVCFFTRVDDSRFIVNCYVPSNRFG QFSAKPSEHELASSLKPYLSDSCVLLQSRSKFWRYLAPVLSDLLVDRYFQEHYVLSNRIFYGGELSTFTPDNLNAYGTHN AIKAGETVANFTIDTISSSHRFINFRPLPPLLNAHVFTFNQQIPKYLGSQPEGNVAFYGLLLSAFKEQSIKSYLLKASVE GLWEYNHGFGVTLEDSLLVLEGLIDNGLPKHHIKRILNLCIDKFYDTTTGLFVTVKKGRSSYWQGPSIHGTAQISYLILK HFNLSDSLLDSQKILDFLSASVTSDSLWKSRWFTNSYFTSFYVVRLLMFLPDDHTTYLLLSRYYERILQSQVSNGSWEDS PISTSSVILTLALYHNSLPITLSNEIKNSLIKAINYLRQFQGQECFPSEPLLYYWYDISEIDDQFTKRFYHCMDKGRISA ALASLALQSASSYIVDK >Mature_737_residues MNSYDVIIVGGGCAGLSALSTLANYRTLLIEKNSSLGGRVNSINLEDASAELGALYSLEPMLQFNSISQTACLDNINGNA QHSSILFIISHSLQFESFSPIEAFDRLAIANQSQQSTSFYKRVIKTNSRSEPTITNPNFGRLDLLSPDQLSLVASLFQVT HPGSIYDCIPSLRPLCLNNFPSLTRTQTNQSVLMNLFRVPSNAQVALSSNIISLTELNSSVEVKFENNDQCISAQAKSVI VTPPPASIFPFIKSIRPQSLNFYHSAPYISGYSFVFLFIGPIPAQSAFVSSIHIWSVCFFTRVDDSRFIVNCYVPSNRFG QFSAKPSEHELASSLKPYLSDSCVLLQSRSKFWRYLAPVLSDLLVDRYFQEHYVLSNRIFYGGELSTFTPDNLNAYGTHN AIKAGETVANFTIDTISSSHRFINFRPLPPLLNAHVFTFNQQIPKYLGSQPEGNVAFYGLLLSAFKEQSIKSYLLKASVE GLWEYNHGFGVTLEDSLLVLEGLIDNGLPKHHIKRILNLCIDKFYDTTTGLFVTVKKGRSSYWQGPSIHGTAQISYLILK HFNLSDSLLDSQKILDFLSASVTSDSLWKSRWFTNSYFTSFYVVRLLMFLPDDHTTYLLLSRYYERILQSQVSNGSWEDS PISTSSVILTLALYHNSLPITLSNEIKNSLIKAINYLRQFQGQECFPSEPLLYYWYDISEIDDQFTKRFYHCMDKGRISA ALASLALQSASSYIVDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 82748; Mature: 82748
Theoretical pI: Translated: 7.12; Mature: 7.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSYDVIIVGGGCAGLSALSTLANYRTLLIEKNSSLGGRVNSINLEDASAELGALYSLEP CCCEEEEEECCCHHHHHHHHHHHHCEEEEEECCCCCCCEEEEECCCCCCHHHHHHEECCH MLQFNSISQTACLDNINGNAQHSSILFIISHSLQFESFSPIEAFDRLAIANQSQQSTSFY HHHHCCCCHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHH KRVIKTNSRSEPTITNPNFGRLDLLSPDQLSLVASLFQVTHPGSIYDCIPSLRPLCLNNF HHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHCCC PSLTRTQTNQSVLMNLFRVPSNAQVALSSNIISLTELNSSVEVKFENNDQCISAQAKSVI CCCHHCCCHHHHHHHHHHCCCCCEEEEECCEEEEEECCCEEEEEECCCCCEEECCCCEEE VTPPPASIFPFIKSIRPQSLNFYHSAPYISGYSFVFLFIGPIPAQSAFVSSIHIWSVCFF EECCCHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHEEEE TRVDDSRFIVNCYVPSNRFGQFSAKPSEHELASSLKPYLSDSCVLLQSRSKFWRYLAPVL EEECCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHH SDLLVDRYFQEHYVLSNRIFYGGELSTFTPDNLNAYGTHNAIKAGETVANFTIDTISSSH HHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCHHCCCHHEEEEEEECCCCC RFINFRPLPPLLNAHVFTFNQQIPKYLGSQPEGNVAFYGLLLSAFKEQSIKSYLLKASVE CEEEEECCCHHHCCEEEEECHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GLWEYNHGFGVTLEDSLLVLEGLIDNGLPKHHIKRILNLCIDKFYDTTTGLFVTVKKGRS HHEEECCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC SYWQGPSIHGTAQISYLILKHFNLSDSLLDSQKILDFLSASVTSDSLWKSRWFTNSYFTS CCCCCCCCCCHHHHEEEEHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHH FYVVRLLMFLPDDHTTYLLLSRYYERILQSQVSNGSWEDSPISTSSVILTLALYHNSLPI HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEEEEEHHCCCCE TLSNEIKNSLIKAINYLRQFQGQECFPSEPLLYYWYDISEIDDQFTKRFYHCMDKGRISA EECHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCHHHH ALASLALQSASSYIVDK HHHHHHHHHCCHHCCCC >Mature Secondary Structure MNSYDVIIVGGGCAGLSALSTLANYRTLLIEKNSSLGGRVNSINLEDASAELGALYSLEP CCCEEEEEECCCHHHHHHHHHHHHCEEEEEECCCCCCCEEEEECCCCCCHHHHHHEECCH MLQFNSISQTACLDNINGNAQHSSILFIISHSLQFESFSPIEAFDRLAIANQSQQSTSFY HHHHCCCCHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCHHHHHHH KRVIKTNSRSEPTITNPNFGRLDLLSPDQLSLVASLFQVTHPGSIYDCIPSLRPLCLNNF HHHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHCCC PSLTRTQTNQSVLMNLFRVPSNAQVALSSNIISLTELNSSVEVKFENNDQCISAQAKSVI CCCHHCCCHHHHHHHHHHCCCCCEEEEECCEEEEEECCCEEEEEECCCCCEEECCCCEEE VTPPPASIFPFIKSIRPQSLNFYHSAPYISGYSFVFLFIGPIPAQSAFVSSIHIWSVCFF EECCCHHHHHHHHHCCCCCCCEEECCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHEEEE TRVDDSRFIVNCYVPSNRFGQFSAKPSEHELASSLKPYLSDSCVLLQSRSKFWRYLAPVL EEECCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHH SDLLVDRYFQEHYVLSNRIFYGGELSTFTPDNLNAYGTHNAIKAGETVANFTIDTISSSH HHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCHHCCCHHEEEEEEECCCCC RFINFRPLPPLLNAHVFTFNQQIPKYLGSQPEGNVAFYGLLLSAFKEQSIKSYLLKASVE CEEEEECCCHHHCCEEEEECHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH GLWEYNHGFGVTLEDSLLVLEGLIDNGLPKHHIKRILNLCIDKFYDTTTGLFVTVKKGRS HHEEECCCCCEEECCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCC SYWQGPSIHGTAQISYLILKHFNLSDSLLDSQKILDFLSASVTSDSLWKSRWFTNSYFTS CCCCCCCCCCHHHHEEEEHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHH FYVVRLLMFLPDDHTTYLLLSRYYERILQSQVSNGSWEDSPISTSSVILTLALYHNSLPI HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHEEEEEHHCCCCE TLSNEIKNSLIKAINYLRQFQGQECFPSEPLLYYWYDISEIDDQFTKRFYHCMDKGRISA EECHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCHHHH ALASLALQSASSYIVDK HHHHHHHHHCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA