| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124023605
Identifier: 124023605
GI number: 124023605
Start: 1666087
End: 1667283
Strand: Reverse
Name: 124023605
Synonym: P9303_19051
Alternate gene names: NA
Gene position: 1667283-1666087 (Counterclockwise)
Preceding gene: 124023606
Following gene: 124023601
Centisome position: 62.15
GC content: 37.59
Gene sequence:
>1197_bases ATGCAAATAAATACAGAAATAACCATCAATCATTTGTTGCAGTCGATCAAATCAATTTATTTTCAGGATGATGGTAAACA CCTTTACCTACACCTGCCATCAAGTTTCTTGCCAGTTTCTTCCTCTAGCGTGATAGCTTCTGATGTAGATCTAGAACATC AAAACAACAATAATTTATCTCTTTTAACTTTTCGCGGCATTGATGCATTATCTAGATATTATAATGCTCAGTTGTACTTT AGCAGATGTTGGAATAGGCCTATTATTCCTTTTTTAGATTTAAACAAATACCAGCCTCCCACTGATCCAATCATGTCATG TATCATTGTCATTAATGAAAATGACAAGTATGTGCGGAATATTCAACTACCATCACTGCTTTCTCAACAAAATAGTAATC TCATCGAGCTAATCATTGTTAATAATGGAAGCAGGTCAATTGAATACCTAAATAAAGCCTTTTCGCCTATTCGCGTAATT GACTCTGAATGGGGCTGTGTCGGCAGAGCATATCAAGCTGGAGCTGATGCCAGTTCTGCAGAAATACTTGCCTTCCTTCA TGATGATTGCATGCCTACAGATCAAAATTGGCTCGTTACTCTATTTAAAACTATTCAAAATAATGGTATTGGAATTATTT CGCAACACGTAATTCCTTTTCAACTAGGCTACATTTGTGACCATATTATTCCCCCTCTGCCTCACGCTAAAGCCTATCCA TTAGTAATAACTCGAGCAAATCTTGAGCTGGTGGGGGGTTGGGATATAAATCATTTTATAGGCTTTGAGGAATTAGATCT TTCTCTGGCTACACTTGATCATAGCCTAGATGTACGACAAATAGAAATTGGGTTTTTACATGAATCAGGTCTTAGTACAA TATTAAAATATCTTGTTAATCATTCAGGACTGCGAGAAGCCTTCGGTTTAGGTGCCATCCCAGCTGATGTTATTTCTAGG CTGCATAAAGCGGCAATGTCGAAATTATCCAAGTCCGAAGTTGGTAGGATCATTACACGTGACCAGTTAAGATACGTATT ACAATCCCATCCCAAGGCGCTGGAAAGGGTCGGCACCAGAAATGTACATTCTGCAATGAGTAAATTAAAAAAACTTTATC AACGGGATGGTTCTATTCTGGATCGACGCAGTGAAATGGTTGATTTTGATAGAAATATTTCTATCACCTCTACGTAG
Upstream 100 bases:
>100_bases GAGTATTATGCTTTCCTCCTTTGCTTTGACATCAGTACCACTTATTGTCAGAGTGCTTTTCTTTCTCGTAAATTCTATCT CTTTTACCTGATTTTCTTGT
Downstream 100 bases:
>100_bases ATGTACTCGTTTCCACAGTAATTCTTCCCTGATCTTTATACGTATTTCAAATTCCTTTTCGCCACAACTTTTCTTTCTAG CGCCATTGATCATTTGATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 398; Mature: 398
Protein sequence:
>398_residues MQINTEITINHLLQSIKSIYFQDDGKHLYLHLPSSFLPVSSSSVIASDVDLEHQNNNNLSLLTFRGIDALSRYYNAQLYF SRCWNRPIIPFLDLNKYQPPTDPIMSCIIVINENDKYVRNIQLPSLLSQQNSNLIELIIVNNGSRSIEYLNKAFSPIRVI DSEWGCVGRAYQAGADASSAEILAFLHDDCMPTDQNWLVTLFKTIQNNGIGIISQHVIPFQLGYICDHIIPPLPHAKAYP LVITRANLELVGGWDINHFIGFEELDLSLATLDHSLDVRQIEIGFLHESGLSTILKYLVNHSGLREAFGLGAIPADVISR LHKAAMSKLSKSEVGRIITRDQLRYVLQSHPKALERVGTRNVHSAMSKLKKLYQRDGSILDRRSEMVDFDRNISITST
Sequences:
>Translated_398_residues MQINTEITINHLLQSIKSIYFQDDGKHLYLHLPSSFLPVSSSSVIASDVDLEHQNNNNLSLLTFRGIDALSRYYNAQLYF SRCWNRPIIPFLDLNKYQPPTDPIMSCIIVINENDKYVRNIQLPSLLSQQNSNLIELIIVNNGSRSIEYLNKAFSPIRVI DSEWGCVGRAYQAGADASSAEILAFLHDDCMPTDQNWLVTLFKTIQNNGIGIISQHVIPFQLGYICDHIIPPLPHAKAYP LVITRANLELVGGWDINHFIGFEELDLSLATLDHSLDVRQIEIGFLHESGLSTILKYLVNHSGLREAFGLGAIPADVISR LHKAAMSKLSKSEVGRIITRDQLRYVLQSHPKALERVGTRNVHSAMSKLKKLYQRDGSILDRRSEMVDFDRNISITST >Mature_398_residues MQINTEITINHLLQSIKSIYFQDDGKHLYLHLPSSFLPVSSSSVIASDVDLEHQNNNNLSLLTFRGIDALSRYYNAQLYF SRCWNRPIIPFLDLNKYQPPTDPIMSCIIVINENDKYVRNIQLPSLLSQQNSNLIELIIVNNGSRSIEYLNKAFSPIRVI DSEWGCVGRAYQAGADASSAEILAFLHDDCMPTDQNWLVTLFKTIQNNGIGIISQHVIPFQLGYICDHIIPPLPHAKAYP LVITRANLELVGGWDINHFIGFEELDLSLATLDHSLDVRQIEIGFLHESGLSTILKYLVNHSGLREAFGLGAIPADVISR LHKAAMSKLSKSEVGRIITRDQLRYVLQSHPKALERVGTRNVHSAMSKLKKLYQRDGSILDRRSEMVDFDRNISITST
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44921; Mature: 44921
Theoretical pI: Translated: 6.92; Mature: 6.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQINTEITINHLLQSIKSIYFQDDGKHLYLHLPSSFLPVSSSSVIASDVDLEHQNNNNLS CCCCCEEEHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCEEEECCCCEECCCCCEE LLTFRGIDALSRYYNAQLYFSRCWNRPIIPFLDLNKYQPPTDPIMSCIIVINENDKYVRN EEEECCHHHHHHHHCCEEEEHHHCCCCCCCEEECCCCCCCCCHHEEEEEEECCCCCEEEE IQLPSLLSQQNSNLIELIIVNNGSRSIEYLNKAFSPIRVIDSEWGCVGRAYQAGADASSA ECCHHHHHHCCCCEEEEEEEECCCHHHHHHHHCCCCEEEECCCCCCCCHHHHCCCCCCHH EILAFLHDDCMPTDQNWLVTLFKTIQNNGIGIISQHVIPFQLGYICDHIIPPLPHAKAYP HHHEEECCCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCC LVITRANLELVGGWDINHFIGFEELDLSLATLDHSLDVRQIEIGFLHESGLSTILKYLVN EEEEECCEEEEECCCHHHHCCHHHHCEEHHHHCCCCCEEEEEEEEEEHHHHHHHHHHHHC HSGLREAFGLGAIPADVISRLHKAAMSKLSKSEVGRIITRDQLRYVLQSHPKALERVGTR CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCC NVHSAMSKLKKLYQRDGSILDRRSEMVDFDRNISITST HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECC >Mature Secondary Structure MQINTEITINHLLQSIKSIYFQDDGKHLYLHLPSSFLPVSSSSVIASDVDLEHQNNNNLS CCCCCEEEHHHHHHHHHHHEEECCCCEEEEECCCCCCCCCCCCEEEECCCCEECCCCCEE LLTFRGIDALSRYYNAQLYFSRCWNRPIIPFLDLNKYQPPTDPIMSCIIVINENDKYVRN EEEECCHHHHHHHHCCEEEEHHHCCCCCCCEEECCCCCCCCCHHEEEEEEECCCCCEEEE IQLPSLLSQQNSNLIELIIVNNGSRSIEYLNKAFSPIRVIDSEWGCVGRAYQAGADASSA ECCHHHHHHCCCCEEEEEEEECCCHHHHHHHHCCCCEEEECCCCCCCCHHHHCCCCCCHH EILAFLHDDCMPTDQNWLVTLFKTIQNNGIGIISQHVIPFQLGYICDHIIPPLPHAKAYP HHHEEECCCCCCCCCHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCC LVITRANLELVGGWDINHFIGFEELDLSLATLDHSLDVRQIEIGFLHESGLSTILKYLVN EEEEECCEEEEECCCHHHHCCHHHHCEEHHHHCCCCCEEEEEEEEEEHHHHHHHHHHHHC HSGLREAFGLGAIPADVISRLHKAAMSKLSKSEVGRIITRDQLRYVLQSHPKALERVGTR CCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCC NVHSAMSKLKKLYQRDGSILDRRSEMVDFDRNISITST HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA