| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124023555
Identifier: 124023555
GI number: 124023555
Start: 1614927
End: 1616417
Strand: Reverse
Name: 124023555
Synonym: P9303_18551
Alternate gene names: NA
Gene position: 1616417-1614927 (Counterclockwise)
Preceding gene: 124023556
Following gene: 124023553
Centisome position: 60.25
GC content: 53.12
Gene sequence:
>1491_bases ATGGCTGAAGAGACACCGCACTCTCTTAACCCCCTAGCGTTATCACAAAGCTGGGGCCAAGACGAGCATGACGATATCCA CACGGCACCACTGATTGCACTTGAGGAGGTGCTTGAAACAAGCAGGTTGCGTCGCGGCATAAGCCGAGAACAGTTGCTAA GTGAATTGTTGCGTGATCTCGATCATCGCCGCCTAATCCCCCTGATAGGAATGCTGCCGAGAGGCTGGAGGATAGCCCCG GCCGTTCTTCCTGAACGTCTACGAGGGATTGCAACCTTATTAGAAGATGGTTTGCTAAGCCCTTTGCTGTTGGCAGCGTT AGCAGATGACCTACAGCATCTGTTGCCGACTCCGGAGAACCAACCGCCCAGTGCCCTGGAACTCTGGCGCCAACCCTCAG TTGCCCTAAAGCCAGGACATGGTGTGGGGGTGCCAAGCAATTTAAAGAACTGTCGATTACTGGCCAACCAGCCAATCACT AGTGATGCACTTTTTGACCGGAAACAGCTTGGTCGAACCCCTTTAGGGAAAGGTCTCACTGCAGTCGGTAGTGGCCTGGT CTGGCACAACGAGGGGTTGGTCATGCTTCAGAACGAGTCTTCTCAACGCATGAATGAGCTCATGGCTCAGGTGCTCAACT GCCTAGCCGCCAATCGTCTACCAGAGGCATTGCATCACTCTGAACCTTTCTTATTCGAGGGGCTATCCTCAGGACGTCAA CTCATTGAGTTGCTGAACCGACAGGGTTGGCACTGTTGCGGACGAATTAGAGCCAGTGTGGCCAGCTTCGGCCTGGGAGC TAGCCAAGCCAAGGGAAGAGGGAGATGGCTTCAGGTCCCTTTGGCAATGCCATATCGAACGGGTCTAGAGGATGATCGCA ACCAGGAGATCCTCAGCTTGTTGCCGCATTGCAGCTTCGAGCTTGAGCTGCAACCTCAAGACAACGATTCAATTTTACTG CAGTATTGTCAGGGTATAGAAGGTATGAATGGCTGGGTCGCGATGAATGACCTGCATCGGCCCTGGCAGAACGATCGCCA CAATGGAACAGTCGCATACCCCAGTCAGCCATCAACACAGCAACGCCTCGCCGATGCAATAGAGATCACCGAATTAATCG CAGCGGTGCACAATGTGGAGGCAAGCTCGCAAAAGCTACACCTAGGGGGGTATGGAGCCCTGGGCTATTGCATTGATTCA ACAGCCCTACTGGAGCAATGCCTTAACGGCTCTACCCATTTATTTCCACTGACACTTGGAGGAATATGGCGAGAACGATT ACGCCGTAGGCTCGACATCCTTCTTGATCAGGGCTTTTGTATCAACACTAGTGTGGTAGATCGCTACCGATGGGGCCTTG ACACGTTGCCCCAGGATCTGAACCTGCAAGGCTCTGCACGATTAGAGGCAATGCAGAGGCTTTCAAGCTGTCAACCTAGC CACAGTCCATTTGCGCTTGTGAGGAGCCTCAACGGCGAAGTGGATCTCTAA
Upstream 100 bases:
>100_bases CCAGCAGACGTCTATGAGCAATTCCGCGGGCGACCAGCGACCACCGAGGCATTGATTCGCCATTCCGGCTTAGCCGCAAG CGCTGCGGATCAGTGAGGAG
Downstream 100 bases:
>100_bases AGTGATGCCAGCGCAAATTTTCATTTATAGATAGATCAACCGGAAGCCGAGCGAGCCAATGCCAAGCAGATGATGCACCA CCGCATTAGTGAAGTTAACA
Product: arginine repressor domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 496; Mature: 495
Protein sequence:
>496_residues MAEETPHSLNPLALSQSWGQDEHDDIHTAPLIALEEVLETSRLRRGISREQLLSELLRDLDHRRLIPLIGMLPRGWRIAP AVLPERLRGIATLLEDGLLSPLLLAALADDLQHLLPTPENQPPSALELWRQPSVALKPGHGVGVPSNLKNCRLLANQPIT SDALFDRKQLGRTPLGKGLTAVGSGLVWHNEGLVMLQNESSQRMNELMAQVLNCLAANRLPEALHHSEPFLFEGLSSGRQ LIELLNRQGWHCCGRIRASVASFGLGASQAKGRGRWLQVPLAMPYRTGLEDDRNQEILSLLPHCSFELELQPQDNDSILL QYCQGIEGMNGWVAMNDLHRPWQNDRHNGTVAYPSQPSTQQRLADAIEITELIAAVHNVEASSQKLHLGGYGALGYCIDS TALLEQCLNGSTHLFPLTLGGIWRERLRRRLDILLDQGFCINTSVVDRYRWGLDTLPQDLNLQGSARLEAMQRLSSCQPS HSPFALVRSLNGEVDL
Sequences:
>Translated_496_residues MAEETPHSLNPLALSQSWGQDEHDDIHTAPLIALEEVLETSRLRRGISREQLLSELLRDLDHRRLIPLIGMLPRGWRIAP AVLPERLRGIATLLEDGLLSPLLLAALADDLQHLLPTPENQPPSALELWRQPSVALKPGHGVGVPSNLKNCRLLANQPIT SDALFDRKQLGRTPLGKGLTAVGSGLVWHNEGLVMLQNESSQRMNELMAQVLNCLAANRLPEALHHSEPFLFEGLSSGRQ LIELLNRQGWHCCGRIRASVASFGLGASQAKGRGRWLQVPLAMPYRTGLEDDRNQEILSLLPHCSFELELQPQDNDSILL QYCQGIEGMNGWVAMNDLHRPWQNDRHNGTVAYPSQPSTQQRLADAIEITELIAAVHNVEASSQKLHLGGYGALGYCIDS TALLEQCLNGSTHLFPLTLGGIWRERLRRRLDILLDQGFCINTSVVDRYRWGLDTLPQDLNLQGSARLEAMQRLSSCQPS HSPFALVRSLNGEVDL >Mature_495_residues AEETPHSLNPLALSQSWGQDEHDDIHTAPLIALEEVLETSRLRRGISREQLLSELLRDLDHRRLIPLIGMLPRGWRIAPA VLPERLRGIATLLEDGLLSPLLLAALADDLQHLLPTPENQPPSALELWRQPSVALKPGHGVGVPSNLKNCRLLANQPITS DALFDRKQLGRTPLGKGLTAVGSGLVWHNEGLVMLQNESSQRMNELMAQVLNCLAANRLPEALHHSEPFLFEGLSSGRQL IELLNRQGWHCCGRIRASVASFGLGASQAKGRGRWLQVPLAMPYRTGLEDDRNQEILSLLPHCSFELELQPQDNDSILLQ YCQGIEGMNGWVAMNDLHRPWQNDRHNGTVAYPSQPSTQQRLADAIEITELIAAVHNVEASSQKLHLGGYGALGYCIDST ALLEQCLNGSTHLFPLTLGGIWRERLRRRLDILLDQGFCINTSVVDRYRWGLDTLPQDLNLQGSARLEAMQRLSSCQPSH SPFALVRSLNGEVDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55075; Mature: 54944
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEETPHSLNPLALSQSWGQDEHDDIHTAPLIALEEVLETSRLRRGISREQLLSELLRDL CCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DHRRLIPLIGMLPRGWRIAPAVLPERLRGIATLLEDGLLSPLLLAALADDLQHLLPTPEN HHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QPPSALELWRQPSVALKPGHGVGVPSNLKNCRLLANQPITSDALFDRKQLGRTPLGKGLT CCCHHHHHHCCCCCEECCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCHH AVGSGLVWHNEGLVMLQNESSQRMNELMAQVLNCLAANRLPEALHHSEPFLFEGLSSGRQ HHCCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LIELLNRQGWHCCGRIRASVASFGLGASQAKGRGRWLQVPLAMPYRTGLEDDRNQEILSL HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHH LPHCSFELELQPQDNDSILLQYCQGIEGMNGWVAMNDLHRPWQNDRHNGTVAYPSQPSTQ HCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEECHHCCCCCCCCCCCEEECCCCCCHH QRLADAIEITELIAAVHNVEASSQKLHLGGYGALGYCIDSTALLEQCLNGSTHLFPLTLG HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHCHHHHHHHHHCCCCEEEEEHHH GIWRERLRRRLDILLDQGFCINTSVVDRYRWGLDTLPQDLNLQGSARLEAMQRLSSCQPS HHHHHHHHHHHHHHHCCCCEECHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHCCCC HSPFALVRSLNGEVDL CCHHHHHHHCCCCCCC >Mature Secondary Structure AEETPHSLNPLALSQSWGQDEHDDIHTAPLIALEEVLETSRLRRGISREQLLSELLRDL CCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH DHRRLIPLIGMLPRGWRIAPAVLPERLRGIATLLEDGLLSPLLLAALADDLQHLLPTPEN HHHHHHHHHHCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC QPPSALELWRQPSVALKPGHGVGVPSNLKNCRLLANQPITSDALFDRKQLGRTPLGKGLT CCCHHHHHHCCCCCEECCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCCCHH AVGSGLVWHNEGLVMLQNESSQRMNELMAQVLNCLAANRLPEALHHSEPFLFEGLSSGRQ HHCCCCEEECCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH LIELLNRQGWHCCGRIRASVASFGLGASQAKGRGRWLQVPLAMPYRTGLEDDRNQEILSL HHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHH LPHCSFELELQPQDNDSILLQYCQGIEGMNGWVAMNDLHRPWQNDRHNGTVAYPSQPSTQ HCCCCEEEEECCCCCHHHHHHHHHCCCCCCCEEEECHHCCCCCCCCCCCEEECCCCCCHH QRLADAIEITELIAAVHNVEASSQKLHLGGYGALGYCIDSTALLEQCLNGSTHLFPLTLG HHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHCHHHHHHHHHCCCCEEEEEHHH GIWRERLRRRLDILLDQGFCINTSVVDRYRWGLDTLPQDLNLQGSARLEAMQRLSSCQPS HHHHHHHHHHHHHHHCCCCEECHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHCCCC HSPFALVRSLNGEVDL CCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA