Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124023553

Identifier: 124023553

GI number: 124023553

Start: 1612888

End: 1614489

Strand: Reverse

Name: 124023553

Synonym: P9303_18531

Alternate gene names: NA

Gene position: 1614489-1612888 (Counterclockwise)

Preceding gene: 124023555

Following gene: 124023551

Centisome position: 60.18

GC content: 52.5

Gene sequence:

>1602_bases
ATGCATTCAGATCTCAAGCAGAAGCACTGGAGGCCGCAATGGTTCGTCCGTGGAGATGTCGACGGATTCCTAGGACTTGG
CCTCGATAACTTGATTCAAGTCCTCTTGATAATTGCCTTATGCCGCAACGTGCTCGGCTATCCGAATGAATTAGTTTTCG
GCACAATCCTTCCTGCCACAGGAATAAGCCTGCTGATAGGCAACCTTGCCTACGCGCATCAGGCTCATCAACTTGCCAGC
ATCGAAAAACGTAGTGATCGGACAGCTCTGCCCTACGGAATTAACACCGTGAGCCTGTTTGCTTATGTGTTTTTGGTAAT
GCTCCCTGTGAAACTCACCGCACTGGGCCAGGGAATGGATGAGGCAAGCGCTGTTCGCCTCTCCTGGCAAGCAGGGATGG
TGGCTTGCCTGGGCTCTGGGCTGATCGAAACAGTAGGGGCTTTTACAGCAGGGGTACTGCGTCGCTGGCTGCCTAGGGCT
GCATTACTTGCCACTCTCGCCGGAATTGCTCTTGGCTACATCGCCCTTGGTTTTCTGCTGCGTACCTATGCCCAACCTGT
AGTGGGGCTGACAGTACTAGCAATTGTTCTGGTCACCTATTACGGACGCTTGCGATTGCCCATTCCTGGTGGCTTGCTTG
CTGTTGTTATTGGCGTGGGGCTTGCTTGGAGTACTGGATTAATCGATAGCGACGCTAGCCGTTGGAGTCAGGAAGCAAGT
CAGATTGGCTTGCGCCTTCCTCACCTAGAAATCGCCAATCTTTGGCATGCTCGTGGCCAGCTGCTGCCCTGGCTAGGGGT
GATTGTGCCAATGGGCCTATTCAACGTGCTGGGTTCTCTTCAAAACATCGAAAGCGCAGAGGCGGCAGGTGATCGTTATT
GCGTTCGAAGCTCTTTATTGATCGATGGCATCGGCACAATGGCTGCCGCAGGTCTGGGGTCTTGTTTTCCTACAACCATT
TATATCGGCCATCCAGCCTGGAAGGAAATGGGGGCTCGCATTGGCTATTCCTGGCTAAATGGCTTGGTAATGGGTAGCGC
TTGTCTTCTAGGTGTTTTTGGTTTGGTCGCAGAGTTGGTACCTATTGAGGCAGGCATGGCGATCGTGCTCTATATCGGCA
TCGTGATTGCTGCTCAAGCCTTTCAAGCCACGCCCAGCACCCATGCACCGGCAGTAGCTCTTGGCCTGCTTCCTGGATTA
GCAGGATGGGGTGCATCACTGATCAAGGCTGGTTTGCGCGCAGGAGGAGCCGGAAGCAATTCAGAACCTTTTAATTCAGC
TTTATTAGGAAGGCTTCAAGAAGCTGATGTATGGGCAAGTGGCGCTTTTGCCCTTGAGCAAGGACAAATTATTACCGCCA
TGCTGCTAGCGGCAATGTTGGTTTATGTGATCGAACAACGCTTTTTAGCAGCAAGCATTACTTCTTTCCTCGCATCTGCA
GCCTCATGGATTGGGATCATCCACGCCTGGCGATTCACCCAGACCGATACTGTTCTGGAGCTTGGCTGGGGCGTTGGTAG
CTCCTGGGCAATGGGCTATCTACTAATGGCAGTTGTGTTCATGCTCGCCGGTTTGCATCAGCGCAGATTGATTTCTGGTT
GA

Upstream 100 bases:

>100_bases
AACTGCCTCCTACTTATCAAGCAAGGCTCTTTTGAAAAGACATTGTCTTGCAACATCAGGAAGTAGCAAGACATGATTGA
ACTGGTCTTACCCAACTGCC

Downstream 100 bases:

>100_bases
CAAAACTGTTTTCAAAATGCATAAGTTAAAGAAATGAGCGAAGGCAACACTATTGGATCCACTTTGCCAGGCTGCTGCAT
GTCACTCCTCTACGTTTGTA

Product: permease

Products: NA

Alternate protein names: Permease; MFS Transporter Xanthine/Uracil Permease; Permease Subfamily Putative; Sulphate Transporter; Regulator; Transcriptional Regulator; Permease Subfamily

Number of amino acids: Translated: 533; Mature: 533

Protein sequence:

>533_residues
MHSDLKQKHWRPQWFVRGDVDGFLGLGLDNLIQVLLIIALCRNVLGYPNELVFGTILPATGISLLIGNLAYAHQAHQLAS
IEKRSDRTALPYGINTVSLFAYVFLVMLPVKLTALGQGMDEASAVRLSWQAGMVACLGSGLIETVGAFTAGVLRRWLPRA
ALLATLAGIALGYIALGFLLRTYAQPVVGLTVLAIVLVTYYGRLRLPIPGGLLAVVIGVGLAWSTGLIDSDASRWSQEAS
QIGLRLPHLEIANLWHARGQLLPWLGVIVPMGLFNVLGSLQNIESAEAAGDRYCVRSSLLIDGIGTMAAAGLGSCFPTTI
YIGHPAWKEMGARIGYSWLNGLVMGSACLLGVFGLVAELVPIEAGMAIVLYIGIVIAAQAFQATPSTHAPAVALGLLPGL
AGWGASLIKAGLRAGGAGSNSEPFNSALLGRLQEADVWASGAFALEQGQIITAMLLAAMLVYVIEQRFLAASITSFLASA
ASWIGIIHAWRFTQTDTVLELGWGVGSSWAMGYLLMAVVFMLAGLHQRRLISG

Sequences:

>Translated_533_residues
MHSDLKQKHWRPQWFVRGDVDGFLGLGLDNLIQVLLIIALCRNVLGYPNELVFGTILPATGISLLIGNLAYAHQAHQLAS
IEKRSDRTALPYGINTVSLFAYVFLVMLPVKLTALGQGMDEASAVRLSWQAGMVACLGSGLIETVGAFTAGVLRRWLPRA
ALLATLAGIALGYIALGFLLRTYAQPVVGLTVLAIVLVTYYGRLRLPIPGGLLAVVIGVGLAWSTGLIDSDASRWSQEAS
QIGLRLPHLEIANLWHARGQLLPWLGVIVPMGLFNVLGSLQNIESAEAAGDRYCVRSSLLIDGIGTMAAAGLGSCFPTTI
YIGHPAWKEMGARIGYSWLNGLVMGSACLLGVFGLVAELVPIEAGMAIVLYIGIVIAAQAFQATPSTHAPAVALGLLPGL
AGWGASLIKAGLRAGGAGSNSEPFNSALLGRLQEADVWASGAFALEQGQIITAMLLAAMLVYVIEQRFLAASITSFLASA
ASWIGIIHAWRFTQTDTVLELGWGVGSSWAMGYLLMAVVFMLAGLHQRRLISG
>Mature_533_residues
MHSDLKQKHWRPQWFVRGDVDGFLGLGLDNLIQVLLIIALCRNVLGYPNELVFGTILPATGISLLIGNLAYAHQAHQLAS
IEKRSDRTALPYGINTVSLFAYVFLVMLPVKLTALGQGMDEASAVRLSWQAGMVACLGSGLIETVGAFTAGVLRRWLPRA
ALLATLAGIALGYIALGFLLRTYAQPVVGLTVLAIVLVTYYGRLRLPIPGGLLAVVIGVGLAWSTGLIDSDASRWSQEAS
QIGLRLPHLEIANLWHARGQLLPWLGVIVPMGLFNVLGSLQNIESAEAAGDRYCVRSSLLIDGIGTMAAAGLGSCFPTTI
YIGHPAWKEMGARIGYSWLNGLVMGSACLLGVFGLVAELVPIEAGMAIVLYIGIVIAAQAFQATPSTHAPAVALGLLPGL
AGWGASLIKAGLRAGGAGSNSEPFNSALLGRLQEADVWASGAFALEQGQIITAMLLAAMLVYVIEQRFLAASITSFLASA
ASWIGIIHAWRFTQTDTVLELGWGVGSSWAMGYLLMAVVFMLAGLHQRRLISG

Specific function: Unknown

COG id: COG2252

COG function: function code R; Permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56475; Mature: 56475

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSDLKQKHWRPQWFVRGDVDGFLGLGLDNLIQVLLIIALCRNVLGYPNELVFGTILPAT
CCCCCHHHCCCCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GISLLIGNLAYAHQAHQLASIEKRSDRTALPYGINTVSLFAYVFLVMLPVKLTALGQGMD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
EASAVRLSWQAGMVACLGSGLIETVGAFTAGVLRRWLPRAALLATLAGIALGYIALGFLL
CHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTYAQPVVGLTVLAIVLVTYYGRLRLPIPGGLLAVVIGVGLAWSTGLIDSDASRWSQEAS
HHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
QIGLRLPHLEIANLWHARGQLLPWLGVIVPMGLFNVLGSLQNIESAEAAGDRYCVRSSLL
HHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IDGIGTMAAAGLGSCFPTTIYIGHPAWKEMGARIGYSWLNGLVMGSACLLGVFGLVAELV
HHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIEAGMAIVLYIGIVIAAQAFQATPSTHAPAVALGLLPGLAGWGASLIKAGLRAGGAGSN
HHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SEPFNSALLGRLQEADVWASGAFALEQGQIITAMLLAAMLVYVIEQRFLAASITSFLASA
CCCHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASWIGIIHAWRFTQTDTVLELGWGVGSSWAMGYLLMAVVFMLAGLHQRRLISG
HHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHCCC
>Mature Secondary Structure
MHSDLKQKHWRPQWFVRGDVDGFLGLGLDNLIQVLLIIALCRNVLGYPNELVFGTILPAT
CCCCCHHHCCCCCEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
GISLLIGNLAYAHQAHQLASIEKRSDRTALPYGINTVSLFAYVFLVMLPVKLTALGQGMD
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
EASAVRLSWQAGMVACLGSGLIETVGAFTAGVLRRWLPRAALLATLAGIALGYIALGFLL
CHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTYAQPVVGLTVLAIVLVTYYGRLRLPIPGGLLAVVIGVGLAWSTGLIDSDASRWSQEAS
HHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
QIGLRLPHLEIANLWHARGQLLPWLGVIVPMGLFNVLGSLQNIESAEAAGDRYCVRSSLL
HHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
IDGIGTMAAAGLGSCFPTTIYIGHPAWKEMGARIGYSWLNGLVMGSACLLGVFGLVAELV
HHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PIEAGMAIVLYIGIVIAAQAFQATPSTHAPAVALGLLPGLAGWGASLIKAGLRAGGAGSN
HHHCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SEPFNSALLGRLQEADVWASGAFALEQGQIITAMLLAAMLVYVIEQRFLAASITSFLASA
CCCHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASWIGIIHAWRFTQTDTVLELGWGVGSSWAMGYLLMAVVFMLAGLHQRRLISG
HHHHHHHHHHHCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA