Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124023275

Identifier: 124023275

GI number: 124023275

Start: 1375598

End: 1376773

Strand: Reverse

Name: 124023275

Synonym: P9303_15731

Alternate gene names: NA

Gene position: 1376773-1375598 (Counterclockwise)

Preceding gene: 124023276

Following gene: 124023274

Centisome position: 51.32

GC content: 38.27

Gene sequence:

>1176_bases
GTGAAACTGATAACAATTCAAAAAATGATAACTCAAATGAACGAGGTTGGAACAAGCATGTCCAATGAAAATACGTACAC
AAATAATAGGAATTTTAATCTAACGGGTAGATTGGCATGGAAGATATTTGATCCAACCCGTCAACCCAATATCAACTGGG
CATCTGAAAGCTATAAAAGTTACAATCTTCTCTTTGAAACTGGAGCAAGAACTCTAATATTAGAATTGCAGAGCACATAC
TTTGAACTTCAAGCCCTTAAAGACATTGTTCGACAGTACATAGAACTATATAAGACAAATAAATCGTCCATGAAAATCGT
GCTGGATCAATATGTTATTGAGTACGCATCACTACTTGACCTCCAACAATCAAAAACTCAAACATTGAATCAATTGTCAA
TGTTGCTGGAATATTACAACAGATATATTACTAAAGCTGCAAACCTTGCTGAAAAGATAAATCTAGATCATATATCAATG
ATAGTACCTGAGGAGCCTTTGGAATTAACAGGTGAATGGAATTTGCCAGTTGATGAAACTGTGCAGAAAGGAAAGTCAGA
GCGCGAAGAGATTCAAAATGCTATCGCATTGTCTGAGAAAAAAAAGTGGGAGGGCTTAAGTCTATTAGGTAACTATATTC
CTTCATTAGGATTGGTTGGAACGATTTCTACATCGAATTCTGAGGGCTACACTGAGGCACCTTCACAGGCTGGTAAGCAA
AATCACTGGAACTCAGTAAATCGATGGAATTCAAGTGTGATGGTTAATATGACATGGCAATTTGATGGAGGAGTGGCTGC
TGCAAATGCTCAGTCATATTTTAAACAATCTGAAAGATCTCGTGATGATGCCAGACAAAAAGAATTTGTGGTTGCCTCGC
AAATTATAAGTAGCTACGGACAATATGAACTAGCAAAGATTGAGGTTGAATCAGCGAGGCAGGGCCTGGAAAGTGCAATG
ATTGCTGAAAAGGTGGCCAGAGAACGTTACTCAATCGGTATAACAGACTATTCGACAGTTGTTCTAACCACTACAACTTT
GGCAAAGTCAGGTATTAATTTTTCTAATTCAATTTCTAAGTATAATACTGCTGTAGCGCAGCTGTACAGATACTCTGCAA
CATGGCCAGAGGGTACCCAAGAGCTGCTTACGAAGCTGATGGAGGAACTAAAGTGA

Upstream 100 bases:

>100_bases
AGCTTAGATACATTAGATTACAACACAAAGATTGGGAATTCTAATCAACAATCTTATACATATAAGACAATAAAGAGTGA
TGAGAATATTAGCTTAACAG

Downstream 100 bases:

>100_bases
GCTCTATTTTTACTGATAAAGCATTAAAATCAAAGCGGCGAAGTTCAGATTTAACAACTCCAACTGAAATACTGTCATCG
CCACTAAAAACGACAACGAA

Product: hypothetical protein

Products: NA

Alternate protein names: RND Family Outer Membrane Efflux Protein

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MKLITIQKMITQMNEVGTSMSNENTYTNNRNFNLTGRLAWKIFDPTRQPNINWASESYKSYNLLFETGARTLILELQSTY
FELQALKDIVRQYIELYKTNKSSMKIVLDQYVIEYASLLDLQQSKTQTLNQLSMLLEYYNRYITKAANLAEKINLDHISM
IVPEEPLELTGEWNLPVDETVQKGKSEREEIQNAIALSEKKKWEGLSLLGNYIPSLGLVGTISTSNSEGYTEAPSQAGKQ
NHWNSVNRWNSSVMVNMTWQFDGGVAAANAQSYFKQSERSRDDARQKEFVVASQIISSYGQYELAKIEVESARQGLESAM
IAEKVARERYSIGITDYSTVVLTTTTLAKSGINFSNSISKYNTAVAQLYRYSATWPEGTQELLTKLMEELK

Sequences:

>Translated_391_residues
MKLITIQKMITQMNEVGTSMSNENTYTNNRNFNLTGRLAWKIFDPTRQPNINWASESYKSYNLLFETGARTLILELQSTY
FELQALKDIVRQYIELYKTNKSSMKIVLDQYVIEYASLLDLQQSKTQTLNQLSMLLEYYNRYITKAANLAEKINLDHISM
IVPEEPLELTGEWNLPVDETVQKGKSEREEIQNAIALSEKKKWEGLSLLGNYIPSLGLVGTISTSNSEGYTEAPSQAGKQ
NHWNSVNRWNSSVMVNMTWQFDGGVAAANAQSYFKQSERSRDDARQKEFVVASQIISSYGQYELAKIEVESARQGLESAM
IAEKVARERYSIGITDYSTVVLTTTTLAKSGINFSNSISKYNTAVAQLYRYSATWPEGTQELLTKLMEELK
>Mature_391_residues
MKLITIQKMITQMNEVGTSMSNENTYTNNRNFNLTGRLAWKIFDPTRQPNINWASESYKSYNLLFETGARTLILELQSTY
FELQALKDIVRQYIELYKTNKSSMKIVLDQYVIEYASLLDLQQSKTQTLNQLSMLLEYYNRYITKAANLAEKINLDHISM
IVPEEPLELTGEWNLPVDETVQKGKSEREEIQNAIALSEKKKWEGLSLLGNYIPSLGLVGTISTSNSEGYTEAPSQAGKQ
NHWNSVNRWNSSVMVNMTWQFDGGVAAANAQSYFKQSERSRDDARQKEFVVASQIISSYGQYELAKIEVESARQGLESAM
IAEKVARERYSIGITDYSTVVLTTTTLAKSGINFSNSISKYNTAVAQLYRYSATWPEGTQELLTKLMEELK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44492; Mature: 44492

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLITIQKMITQMNEVGTSMSNENTYTNNRNFNLTGRLAWKIFDPTRQPNINWASESYKS
CCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCHHHCHHH
YNLLFETGARTLILELQSTYFELQALKDIVRQYIELYKTNKSSMKIVLDQYVIEYASLLD
HEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LQQSKTQTLNQLSMLLEYYNRYITKAANLAEKINLDHISMIVPEEPLELTGEWNLPVDET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHH
VQKGKSEREEIQNAIALSEKKKWEGLSLLGNYIPSLGLVGTISTSNSEGYTEAPSQAGKQ
HHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHCCCC
NHWNSVNRWNSSVMVNMTWQFDGGVAAANAQSYFKQSERSRDDARQKEFVVASQIISSYG
CCCCCHHCCCCEEEEEEEEEECCCEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC
QYELAKIEVESARQGLESAMIAEKVARERYSIGITDYSTVVLTTTTLAKSGINFSNSISK
CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEHHHHHCCCCCHHHHHH
YNTAVAQLYRYSATWPEGTQELLTKLMEELK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKLITIQKMITQMNEVGTSMSNENTYTNNRNFNLTGRLAWKIFDPTRQPNINWASESYKS
CCEEHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEEEEEECCCCCCCCCCHHHCHHH
YNLLFETGARTLILELQSTYFELQALKDIVRQYIELYKTNKSSMKIVLDQYVIEYASLLD
HEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
LQQSKTQTLNQLSMLLEYYNRYITKAANLAEKINLDHISMIVPEEPLELTGEWNLPVDET
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHHH
VQKGKSEREEIQNAIALSEKKKWEGLSLLGNYIPSLGLVGTISTSNSEGYTEAPSQAGKQ
HHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHCCCC
NHWNSVNRWNSSVMVNMTWQFDGGVAAANAQSYFKQSERSRDDARQKEFVVASQIISSYG
CCCCCHHCCCCEEEEEEEEEECCCEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCC
QYELAKIEVESARQGLESAMIAEKVARERYSIGITDYSTVVLTTTTLAKSGINFSNSISK
CEEEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCCCCCEEEEEEHHHHHCCCCCHHHHHH
YNTAVAQLYRYSATWPEGTQELLTKLMEELK
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA