Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is dfa1 [H]

Identifier: 124023199

GI number: 124023199

Start: 1299311

End: 1299817

Strand: Reverse

Name: dfa1 [H]

Synonym: P9303_14951

Alternate gene names: 124023199

Gene position: 1299817-1299311 (Counterclockwise)

Preceding gene: 124023202

Following gene: 124023198

Centisome position: 48.45

GC content: 49.31

Gene sequence:

>507_bases
TTGGTAGATCTGATGAGATTCTCAATGGCACTGGATCTAGAAGCGAAAAAGGTTTTGCTTCGCAAAATCCCCCATGGTCT
TTTTATTTGTGGAGTCCGTGAAGGTGATGAAATCAATGGCTTTACAGCAAGTTGGGTGACTCAAGGGTCGTTCGAACCAC
CTCTTGTTGTTATGGCAGTTCGATCAGAAGGAAGCAGTCATGGAATCATCGAGCGAACCAAGCATTTCTCGCTCAATGTG
CTTCGGGCTGATCAGAAAGAACTTGCGGCAGTTTTCTTTAAGCCTCAGTCGGCGATGGGAGGCCGCTTTGAGTCAGCCCC
CTTTCGTTATGGCGAATTGGGTCTACCCCTGCTAGAGGATGCTATTGGTGGAGTTGAGTGTGAACTTGTGGGCCAGGTCG
TCCATGGTGATCACACTGTTTTCGTCGGAGAAGTGAGATCAGCCCATCTAAATCAGGATGGGGATGCGCTTAACCTCGCT
TCAACGGGTTGGTCATACGGCGGTTGA

Upstream 100 bases:

>100_bases
AGATGACCCAGTGTTAAAGGGTCAAAGCTGCCTGGGTAAAGGGCCCTCATGATCCAATCAAACCACTTCTGGATCCTATG
CAGTGAGGTGCTGCTTAGAG

Downstream 100 bases:

>100_bases
AAATAATTTGACCAACGCTTCTCAGCGCACCATCCTTCTAAAGGATGAAAAAAGACTTGAGCAAAGGCTTAAGGAGATTC
CAGCTGAACCTGGTTGTTAT

Product: hypothetical protein

Products: NAD(+); reduced flavin [C]

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MVDLMRFSMALDLEAKKVLLRKIPHGLFICGVREGDEINGFTASWVTQGSFEPPLVVMAVRSEGSSHGIIERTKHFSLNV
LRADQKELAAVFFKPQSAMGGRFESAPFRYGELGLPLLEDAIGGVECELVGQVVHGDHTVFVGEVRSAHLNQDGDALNLA
STGWSYGG

Sequences:

>Translated_168_residues
MVDLMRFSMALDLEAKKVLLRKIPHGLFICGVREGDEINGFTASWVTQGSFEPPLVVMAVRSEGSSHGIIERTKHFSLNV
LRADQKELAAVFFKPQSAMGGRFESAPFRYGELGLPLLEDAIGGVECELVGQVVHGDHTVFVGEVRSAHLNQDGDALNLA
STGWSYGG
>Mature_168_residues
MVDLMRFSMALDLEAKKVLLRKIPHGLFICGVREGDEINGFTASWVTQGSFEPPLVVMAVRSEGSSHGIIERTKHFSLNV
LRADQKELAAVFFKPQSAMGGRFESAPFRYGELGLPLLEDAIGGVECELVGQVVHGDHTVFVGEVRSAHLNQDGDALNLA
STGWSYGG

Specific function: Mediates electron transfer from NADH to oxygen, reducing it to water. This modular protein has 3 redox cofactors, in other organisms the same activity requires 2 or 3 proteins [H]

COG id: COG1853

COG function: function code R; Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 flavodoxin-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR002563
- InterPro:   IPR008254
- InterPro:   IPR012349
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01613 Flavin_Reduct; PF00753 Lactamase_B [H]

EC number: 1.6.8.- [C]

Molecular weight: Translated: 18245; Mature: 18245

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDLMRFSMALDLEAKKVLLRKIPHGLFICGVREGDEINGFTASWVTQGSFEPPLVVMAV
CCCHHEEHEEECCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEE
RSEGSSHGIIERTKHFSLNVLRADQKELAAVFFKPQSAMGGRFESAPFRYGELGLPLLED
ECCCCCCCCEEECCCEEEEEEECCHHHEEEEEECCCHHCCCCCCCCCCCCCCCCCCHHHH
AIGGVECELVGQVVHGDHTVFVGEVRSAHLNQDGDALNLASTGWSYGG
HCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCC
>Mature Secondary Structure
MVDLMRFSMALDLEAKKVLLRKIPHGLFICGVREGDEINGFTASWVTQGSFEPPLVVMAV
CCCHHEEHEEECCHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCEEEEEE
RSEGSSHGIIERTKHFSLNVLRADQKELAAVFFKPQSAMGGRFESAPFRYGELGLPLLED
ECCCCCCCCEEECCCEEEEEEECCHHHEEEEEECCCHHCCCCCCCCCCCCCCCCCCHHHH
AIGGVECELVGQVVHGDHTVFVGEVRSAHLNQDGDALNLASTGWSYGG
HCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCCCEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NADH; flavin [C]

Specific reaction: NADH + flavin = NAD(+) + reduced flavin [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]