Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124023180

Identifier: 124023180

GI number: 124023180

Start: 1270222

End: 1272027

Strand: Direct

Name: 124023180

Synonym: P9303_14761

Alternate gene names: NA

Gene position: 1270222-1272027 (Clockwise)

Preceding gene: 124023176

Following gene: 124023184

Centisome position: 47.35

GC content: 48.45

Gene sequence:

>1806_bases
GTGTCTGCGACCAAAACTTGTTCCACTACGCAGGTGCCCTTGGTGGTCTGGGGTGGAGGCACAGGAGGCGTCGCCTCAGC
CGTACAAGCTGCTCGACATGGAATTAGAACTCTGCTGTTAACACCAGGCGCGTGGCTTGGTGGAATGGTCAGTGCAGCAG
GCGTTTCGGCTCCAGACGGCCATGAACTCAGTTGCTGGCAGACAGGCTTGTGGGGGGCCTTCCTTCAAGACATCGCCAAA
GTTGAACAGGATGGACTGGATCAGAACTGGGTGAGTTGCTTTGGTTTTAATCCAGCTCGCGCAGAAGAGGTTTTGCGGAG
CTGGGTTGTCGATCTCCCCAATCTCGAATGGTGGTCTGACGTTCAGCTCAAATCACTGTTACGTGAGGGGGATCGCCTTG
TTTTGCTTGAGCTGGAGCTTGAAGGGCGACAGCATCAACTGCGCTTCGACTTATTCATTGATGGAAGTGATTTAGGCGAC
AGCTTTTCACTCGCAGACATTTCACACCGTTGGGGTTGGGAATCACAAGAACTCTGGAATGAGCCAAGCGCCCCTTCTGC
AAAACAATTGAATTGCGATCCATTCTTTGCCAGCCAGCCTGTTCAATCACCTACTTGGGTTGTGATGGGTCAACTCGATC
AACATGCACAATCACCTTCATCACCAGGGTGCTTGCCTCGACCATTCGAAGGTGCAACTGAGGCGTTTGGTTTTGAGCGC
ACCGTTACCTATGGCCGCCTTCCAGGCGGTTTAGTAATGCTCAACTGGCCCCTTCATGGAAACGACTGGCATAAAGGCTT
GGAGCGTATACGCAGCTCAGACGTCAAAATTAAAAACCAGCTTGCTGCAGAAATGCAGCTGTATAGCTTGTCATTCCTAC
AAGCTCTTCAAACAGTTAGTGAGGGTTGGCTTAAGCCTGGCAAGGTTTTTCCAGGGATCAATCAAAGCCTGGCATTGATG
CCCTATTGGCGAGAAGGTCGACGCCTTAAAGGTCAATACACCTTAGTGGAAGGAGATCTTCTGCCATTAGCCTCTGGTGC
AGCCCGAGGACCAATCCCTTTAGATAAACAGGGACGTTGCACCAGTATTGCTGTAGGGACTTACGCTAATGATCATCATT
ATCCTGGTAAAGATTGGCCCTTAGCCTCAAAAAGTTGTAGATGGGGTGGGAGATGGACAGGTACTCCATTCTGCATTCCT
TACGGGGCTCTACTGAGTAGCGAAGTGGAGAATATTCTGATAGCTGATAAGGCTTTTAGTGTGAGTCATATAGCCAATGG
TGCAACTCGATTACAGCCAATGATTTTTAATCTTGGCCAGGCTGCTGGTATGGCAGCAGCTATAGCCTTGAAAAAGAGGC
TTCAACCAGCAGAAGTTGATATTTCAGAAATACAGCATGAACTATTGCATGATATTTATGCCCCAGCCGCTATTGTTCCA
ATTTGGGATTGGCCTGCATGGCATCCTCACTGGCGTAATGCACAGAAATTTGTTTTGGCGCAACCAGAGTGCCTCAGCAA
CCATAGCGTGATTGAAGGTTTTAATCTTAAAGCAAATGTAGGAGAAATGCCACTGCCAGATCAAACACCACTCAATAAAC
ATGTGAAAAAGTTTTCAGGCTACCTTCGTATTCATTCTGATCAGACATTCTCTCTTGATACCAAGTTTAAATCCTGGCGA
CTAATAACACTGGAGCCGGCATTAAAGCGGTGGCTGGAATCATGTGAAGACCAGCAGAATGTACACCTTCTAGCAGTTGC
CAATCCATGGGGACCATGGCTGAGGTTGATTCGCATTTTAGATTAA

Upstream 100 bases:

>100_bases
TCTATGAACAATTTGTTGCGCCTCGCCAGCGTTGTTTAAGCAAGCTTTGTTATGAAGCTCAATTGCTTTCTGGCAAAGAT
GATTATGTTTTGGGATGACA

Downstream 100 bases:

>100_bases
TAGCAGCTTTTGGTAGTTTGTTTTTTGTTTCTTTGCTTTGAGAAGCTACTTGGCGACCAACTCAATTTGATCAGTCAATG
GATCAATTGCAAGAACTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 601; Mature: 600

Protein sequence:

>601_residues
MSATKTCSTTQVPLVVWGGGTGGVASAVQAARHGIRTLLLTPGAWLGGMVSAAGVSAPDGHELSCWQTGLWGAFLQDIAK
VEQDGLDQNWVSCFGFNPARAEEVLRSWVVDLPNLEWWSDVQLKSLLREGDRLVLLELELEGRQHQLRFDLFIDGSDLGD
SFSLADISHRWGWESQELWNEPSAPSAKQLNCDPFFASQPVQSPTWVVMGQLDQHAQSPSSPGCLPRPFEGATEAFGFER
TVTYGRLPGGLVMLNWPLHGNDWHKGLERIRSSDVKIKNQLAAEMQLYSLSFLQALQTVSEGWLKPGKVFPGINQSLALM
PYWREGRRLKGQYTLVEGDLLPLASGAARGPIPLDKQGRCTSIAVGTYANDHHYPGKDWPLASKSCRWGGRWTGTPFCIP
YGALLSSEVENILIADKAFSVSHIANGATRLQPMIFNLGQAAGMAAAIALKKRLQPAEVDISEIQHELLHDIYAPAAIVP
IWDWPAWHPHWRNAQKFVLAQPECLSNHSVIEGFNLKANVGEMPLPDQTPLNKHVKKFSGYLRIHSDQTFSLDTKFKSWR
LITLEPALKRWLESCEDQQNVHLLAVANPWGPWLRLIRILD

Sequences:

>Translated_601_residues
MSATKTCSTTQVPLVVWGGGTGGVASAVQAARHGIRTLLLTPGAWLGGMVSAAGVSAPDGHELSCWQTGLWGAFLQDIAK
VEQDGLDQNWVSCFGFNPARAEEVLRSWVVDLPNLEWWSDVQLKSLLREGDRLVLLELELEGRQHQLRFDLFIDGSDLGD
SFSLADISHRWGWESQELWNEPSAPSAKQLNCDPFFASQPVQSPTWVVMGQLDQHAQSPSSPGCLPRPFEGATEAFGFER
TVTYGRLPGGLVMLNWPLHGNDWHKGLERIRSSDVKIKNQLAAEMQLYSLSFLQALQTVSEGWLKPGKVFPGINQSLALM
PYWREGRRLKGQYTLVEGDLLPLASGAARGPIPLDKQGRCTSIAVGTYANDHHYPGKDWPLASKSCRWGGRWTGTPFCIP
YGALLSSEVENILIADKAFSVSHIANGATRLQPMIFNLGQAAGMAAAIALKKRLQPAEVDISEIQHELLHDIYAPAAIVP
IWDWPAWHPHWRNAQKFVLAQPECLSNHSVIEGFNLKANVGEMPLPDQTPLNKHVKKFSGYLRIHSDQTFSLDTKFKSWR
LITLEPALKRWLESCEDQQNVHLLAVANPWGPWLRLIRILD
>Mature_600_residues
SATKTCSTTQVPLVVWGGGTGGVASAVQAARHGIRTLLLTPGAWLGGMVSAAGVSAPDGHELSCWQTGLWGAFLQDIAKV
EQDGLDQNWVSCFGFNPARAEEVLRSWVVDLPNLEWWSDVQLKSLLREGDRLVLLELELEGRQHQLRFDLFIDGSDLGDS
FSLADISHRWGWESQELWNEPSAPSAKQLNCDPFFASQPVQSPTWVVMGQLDQHAQSPSSPGCLPRPFEGATEAFGFERT
VTYGRLPGGLVMLNWPLHGNDWHKGLERIRSSDVKIKNQLAAEMQLYSLSFLQALQTVSEGWLKPGKVFPGINQSLALMP
YWREGRRLKGQYTLVEGDLLPLASGAARGPIPLDKQGRCTSIAVGTYANDHHYPGKDWPLASKSCRWGGRWTGTPFCIPY
GALLSSEVENILIADKAFSVSHIANGATRLQPMIFNLGQAAGMAAAIALKKRLQPAEVDISEIQHELLHDIYAPAAIVPI
WDWPAWHPHWRNAQKFVLAQPECLSNHSVIEGFNLKANVGEMPLPDQTPLNKHVKKFSGYLRIHSDQTFSLDTKFKSWRL
ITLEPALKRWLESCEDQQNVHLLAVANPWGPWLRLIRILD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 66753; Mature: 66622

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATKTCSTTQVPLVVWGGGTGGVASAVQAARHGIRTLLLTPGAWLGGMVSAAGVSAPDG
CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCCCCC
HELSCWQTGLWGAFLQDIAKVEQDGLDQNWVSCFGFNPARAEEVLRSWVVDLPNLEWWSD
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCH
VQLKSLLREGDRLVLLELELEGRQHQLRFDLFIDGSDLGDSFSLADISHRWGWESQELWN
HHHHHHHHCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCEEHHHHHHCCCCCHHHCC
EPSAPSAKQLNCDPFFASQPVQSPTWVVMGQLDQHAQSPSSPGCLPRPFEGATEAFGFER
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCCCCCCCCHHHHCCCCC
TVTYGRLPGGLVMLNWPLHGNDWHKGLERIRSSDVKIKNQLAAEMQLYSLSFLQALQTVS
EEEECCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EGWLKPGKVFPGINQSLALMPYWREGRRLKGQYTLVEGDLLPLASGAARGPIPLDKQGRC
HHCCCCCCCCCCCCCCEEECCCCCCCCEECCEEEEEECCCEECCCCCCCCCCCCCCCCCE
TSIAVGTYANDHHYPGKDWPLASKSCRWGGRWTGTPFCIPYGALLSSEVENILIADKAFS
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCC
VSHIANGATRLQPMIFNLGQAAGMAAAIALKKRLQPAEVDISEIQHELLHDIYAPAAIVP
HHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEE
IWDWPAWHPHWRNAQKFVLAQPECLSNHSVIEGFNLKANVGEMPLPDQTPLNKHVKKFSG
ECCCCCCCCCCCCCCEEEEECCHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHCC
YLRIHSDQTFSLDTKFKSWRLITLEPALKRWLESCEDQQNVHLLAVANPWGPWLRLIRIL
EEEEECCCEEEEECCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHC
D
C
>Mature Secondary Structure 
SATKTCSTTQVPLVVWGGGTGGVASAVQAARHGIRTLLLTPGAWLGGMVSAAGVSAPDG
CCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCEEEEECCCHHHHHHHHHCCCCCCCC
HELSCWQTGLWGAFLQDIAKVEQDGLDQNWVSCFGFNPARAEEVLRSWVVDLPNLEWWSD
CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCH
VQLKSLLREGDRLVLLELELEGRQHQLRFDLFIDGSDLGDSFSLADISHRWGWESQELWN
HHHHHHHHCCCEEEEEEEEECCCCEEEEEEEEECCCCCCCCCEEHHHHHHCCCCCHHHCC
EPSAPSAKQLNCDPFFASQPVQSPTWVVMGQLDQHAQSPSSPGCLPRPFEGATEAFGFER
CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHCCCCCCCCCCCCCCCCHHHHCCCCC
TVTYGRLPGGLVMLNWPLHGNDWHKGLERIRSSDVKIKNQLAAEMQLYSLSFLQALQTVS
EEEECCCCCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
EGWLKPGKVFPGINQSLALMPYWREGRRLKGQYTLVEGDLLPLASGAARGPIPLDKQGRC
HHCCCCCCCCCCCCCCEEECCCCCCCCEECCEEEEEECCCEECCCCCCCCCCCCCCCCCE
TSIAVGTYANDHHYPGKDWPLASKSCRWGGRWTGTPFCIPYGALLSSEVENILIADKAFS
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCC
VSHIANGATRLQPMIFNLGQAAGMAAAIALKKRLQPAEVDISEIQHELLHDIYAPAAIVP
HHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCEEEEE
IWDWPAWHPHWRNAQKFVLAQPECLSNHSVIEGFNLKANVGEMPLPDQTPLNKHVKKFSG
ECCCCCCCCCCCCCCEEEEECCHHHCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHCC
YLRIHSDQTFSLDTKFKSWRLITLEPALKRWLESCEDQQNVHLLAVANPWGPWLRLIRIL
EEEEECCCEEEEECCCCCEEEEEECHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA