Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

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The map label for this gene is 124022920

Identifier: 124022920

GI number: 124022920

Start: 1056460

End: 1056969

Strand: Reverse

Name: 124022920

Synonym: P9303_12131

Alternate gene names: NA

Gene position: 1056969-1056460 (Counterclockwise)

Preceding gene: 124022921

Following gene: 124022918

Centisome position: 39.4

GC content: 51.37

Gene sequence:

>510_bases
ATGAACTCTTTACTTCAACGGCGCATCGCAGCAGTGCTCTTGTTTATTGCAGCTGCCATTGCCATCCTTTTGCCTTTTGC
CTCAGCCACCCTGCTAACCATTGCCCTCGGGGGGGCTGCCTGTGCCGCAGGCATTGGCCAATTATTGCGTCTTGGCGGTG
AAGCGGGCTTGCAGGGCAAAGTGTTTCGAGGCTTCAGTGGCGTGCTCTATATCGCAGCTGCTCTTTGGATTTTGATCGAC
CCGGTTGATAGTGAAATCAGCCTTACCTTGTTTGCAGGCGTCTTGCTTCTAATCGAAGGCTTGATGGAATTGGCTGGAGG
TGCAGCATCTCCAAGCCCTTTAGGTGGATTGGTTGTCTTCGATGGAGTGATCACAGCAATCTTCGGTCTATTGCTTGTTA
TTGAATGGCCTTCAGACAGCATTTGGGCTCTCGGAACATTATTCGGAGCAGCATTGTTCCTATCTGCAATCAACCTGCTT
AGGGGCCCTAAGCCTGCTGAGACCACTTAG

Upstream 100 bases:

>100_bases
TGCTGCTTAACCTTCTGATCACTGGAGGGATGGAAGTTCTCAATCGAGTTGTGATCAGATCCCAGCAATAGCCTTAAGCT
CAATAAGGTTTTTGTTTTTC

Downstream 100 bases:

>100_bases
CAATTGGATCTCATTGGCGACATCATCAAATGTCGCCAATGAGACCAGTATCGATTAATAAGCTGAGATCTCAACATTCC
CATAGAGATGCATTGAATCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MNSLLQRRIAAVLLFIAAAIAILLPFASATLLTIALGGAACAAGIGQLLRLGGEAGLQGKVFRGFSGVLYIAAALWILID
PVDSEISLTLFAGVLLLIEGLMELAGGAASPSPLGGLVVFDGVITAIFGLLLVIEWPSDSIWALGTLFGAALFLSAINLL
RGPKPAETT

Sequences:

>Translated_169_residues
MNSLLQRRIAAVLLFIAAAIAILLPFASATLLTIALGGAACAAGIGQLLRLGGEAGLQGKVFRGFSGVLYIAAALWILID
PVDSEISLTLFAGVLLLIEGLMELAGGAASPSPLGGLVVFDGVITAIFGLLLVIEWPSDSIWALGTLFGAALFLSAINLL
RGPKPAETT
>Mature_169_residues
MNSLLQRRIAAVLLFIAAAIAILLPFASATLLTIALGGAACAAGIGQLLRLGGEAGLQGKVFRGFSGVLYIAAALWILID
PVDSEISLTLFAGVLLLIEGLMELAGGAASPSPLGGLVVFDGVITAIFGLLLVIEWPSDSIWALGTLFGAALFLSAINLL
RGPKPAETT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17241; Mature: 17241

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLLQRRIAAVLLFIAAAIAILLPFASATLLTIALGGAACAAGIGQLLRLGGEAGLQGK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
VFRGFSGVLYIAAALWILIDPVDSEISLTLFAGVLLLIEGLMELAGGAASPSPLGGLVVF
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
DGVITAIFGLLLVIEWPSDSIWALGTLFGAALFLSAINLLRGPKPAETT
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNSLLQRRIAAVLLFIAAAIAILLPFASATLLTIALGGAACAAGIGQLLRLGGEAGLQGK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
VFRGFSGVLYIAAALWILIDPVDSEISLTLFAGVLLLIEGLMELAGGAASPSPLGGLVVF
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
DGVITAIFGLLLVIEWPSDSIWALGTLFGAALFLSAINLLRGPKPAETT
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA