Definition Prochlorococcus marinus str. MIT 9303, complete genome.
Accession NC_008820
Length 2,682,675

Click here to switch to the map view.

The map label for this gene is 124022792

Identifier: 124022792

GI number: 124022792

Start: 971357

End: 971935

Strand: Reverse

Name: 124022792

Synonym: P9303_10851

Alternate gene names: NA

Gene position: 971935-971357 (Counterclockwise)

Preceding gene: 124022793

Following gene: 124022791

Centisome position: 36.23

GC content: 47.5

Gene sequence:

>579_bases
ATGAAAATTCACATCATCGACCTTCGTCAATCATCAGGTGATCAGAGTTGTCTAGACAATAGTTTCGACAATATTAAGCG
TAGGCTATTCCTACGACGCTCAGCATATCAACAACTGGCAAAGGAGGAGGGCTTTAGCTACATAAGCTGGAATTGCCCTT
ATTGCGGCAGTTCCAAGCATGGAAGGCCTACGACTAAAACAGCAAGTGTTAGCTCAAGTAGTTATGGGAACTGGGCGGTT
ATTGCCTTTGCACCACGTACGATGGCAATCGGAATCGACATCACACCAAAAAGGCCTCCTTCAGAGGCTGAAGGTATTGC
AGAAGCCTTCTTCACCCCTGGAGAACTTTGCCAACGTCCAACTGGTGGTTGGCAGGAAGGGGTTGGGTTTTCGGAAATCT
GGGCTGCTAAAGAGGCCCTTGGAAAAGCGCAAGGCATTGGATTGGCAATAGATCATCCAAACCACCCAGGAGGCGCACTT
GATACATCAACACATGCTGAGCTATTGAGCAGATTTACTGGCCAGCATGGCTTACCACCTCATCTAACTTGCAGAGCGGC
AGTTATAAGTACTCAATAA

Upstream 100 bases:

>100_bases
AAGCTGTTCTGAACAGCCTAGGAGTTTCCATAGATTCAGACCCTAGGATGCTTGCCAAACTCTATGTTCCTTACCTAATT
GAGCAAGGATTCCTAATACC

Downstream 100 bases:

>100_bases
TTACGTTTGTTTAGGTTGATAAATTAACCCTGGAGACGATAGGTTGTCGCCATTTTATTGAGAAAAGTTGGGGAATAGCT
AGGGATATGTGTCAATCTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MKIHIIDLRQSSGDQSCLDNSFDNIKRRLFLRRSAYQQLAKEEGFSYISWNCPYCGSSKHGRPTTKTASVSSSSYGNWAV
IAFAPRTMAIGIDITPKRPPSEAEGIAEAFFTPGELCQRPTGGWQEGVGFSEIWAAKEALGKAQGIGLAIDHPNHPGGAL
DTSTHAELLSRFTGQHGLPPHLTCRAAVISTQ

Sequences:

>Translated_192_residues
MKIHIIDLRQSSGDQSCLDNSFDNIKRRLFLRRSAYQQLAKEEGFSYISWNCPYCGSSKHGRPTTKTASVSSSSYGNWAV
IAFAPRTMAIGIDITPKRPPSEAEGIAEAFFTPGELCQRPTGGWQEGVGFSEIWAAKEALGKAQGIGLAIDHPNHPGGAL
DTSTHAELLSRFTGQHGLPPHLTCRAAVISTQ
>Mature_192_residues
MKIHIIDLRQSSGDQSCLDNSFDNIKRRLFLRRSAYQQLAKEEGFSYISWNCPYCGSSKHGRPTTKTASVSSSSYGNWAV
IAFAPRTMAIGIDITPKRPPSEAEGIAEAFFTPGELCQRPTGGWQEGVGFSEIWAAKEALGKAQGIGLAIDHPNHPGGAL
DTSTHAELLSRFTGQHGLPPHLTCRAAVISTQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20815; Mature: 20815

Theoretical pI: Translated: 8.23; Mature: 8.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIHIIDLRQSSGDQSCLDNSFDNIKRRLFLRRSAYQQLAKEEGFSYISWNCPYCGSSKH
CEEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
GRPTTKTASVSSSSYGNWAVIAFAPRTMAIGIDITPKRPPSEAEGIAEAFFTPGELCQRP
CCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHCCCHHHHCCC
TGGWQEGVGFSEIWAAKEALGKAQGIGLAIDHPNHPGGALDTSTHAELLSRFTGQHGLPP
CCCHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCC
HLTCRAAVISTQ
CCEEEEEEEECC
>Mature Secondary Structure
MKIHIIDLRQSSGDQSCLDNSFDNIKRRLFLRRSAYQQLAKEEGFSYISWNCPYCGSSKH
CEEEEEECCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCC
GRPTTKTASVSSSSYGNWAVIAFAPRTMAIGIDITPKRPPSEAEGIAEAFFTPGELCQRP
CCCCCCCCCCCCCCCCCEEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHCCCHHHHCCC
TGGWQEGVGFSEIWAAKEALGKAQGIGLAIDHPNHPGGALDTSTHAELLSRFTGQHGLPP
CCCHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCC
HLTCRAAVISTQ
CCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA