| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is gltX
Identifier: 124022388
GI number: 124022388
Start: 636428
End: 637858
Strand: Reverse
Name: gltX
Synonym: P9303_06791
Alternate gene names: 124022388
Gene position: 637858-636428 (Counterclockwise)
Preceding gene: 124022390
Following gene: 124022383
Centisome position: 23.78
GC content: 54.16
Gene sequence:
>1431_bases GTGAAGGTGCGCGTTCGGCTGGCCCCGAGTCCAACAGGCACACTTCACATCGGCACGGCAAGAACGGCAGTTTTCAACTG GCTCTTTGCACGCCATCAGGGGGGAGAATTCCTCGTGCGCATCGAGGACACCGACAAAGAACGATCCAAGCCTGAATTCA CGACCAACATCCTCGAAGGTCTGAAGTGGCTTGGCCTCAACTGGGATGAACAGCCCATCATTCAAAGCCAGCATGTGGAT GACCATCGCGCAGCAATCCAAAAGCTGCTCGATCTTGACCTGGCCTACCGCTGCTACGCCAGCGAGACTGAACTGGAGGC CATGCGAGAAACACAAAAGGCCCAGGGCCAGGCCCCTCGCTACGACAACCGTCACCGAAATCTCAATCCCGAGCAAGAAG CCGCCTTCCAATCTGAAGGCAGAAGTGCCGTGGTGCGCTTCCGTATCGATGATGTTGCGGCCATCAGTTGGAAGGATCTG GTGCGCGGTCCAATGCACTGGAGGGGATCAGATTTGGGCGGCGATATGGTGATCTCACGTCGGGCTCCAGCCAAGGAAAT TGGCGACCCGCTCTATAACCTTGTGGTGGTGGTTGATGACGCCGCCATGAGTATCTCGCATGTGATCCGCGGCGAAGATC ACATCGCAAACACGGCCAAACAACTGCTGATCTATGAGGCCCTTGGATTACCAATACCTCAATTCGCCCATACCCCGCTC ATTCTCAATTCTGAAGGACGCAAACTCTCCAAGCGGGATGGAGTGACCTCGATCAGTGACTTCCAAGCCATGGGATATAC AGCGGAAGCTATGGCCAACTACATGACCCTGTTGGGCTGGTCAGTCCCCGAAGGGACTGACGAACGGTTCACTCTTCAGC AAGCTGCAACCGTCTTCAGTTTTGACCGAGTCAATAAAGCAGGAGCAAAGTTTGACTGGGACAAACTCAACTGGCTCAAC TCTCAAGTGCTACATGACTTGCCTAAAGATCAACTGTTGCATGAACTCAAACCCTTGTGGTCTGAGGCTGGCTGGGCTCT GCCAGAAGAAAACTGGTGTTTGGATCTAGCCGAGCTGCTTGGTCCATCGCTGACACTGCTCAAGGATGGTGTCGATCAAG CCCGCCCTTTTTTCGAAGAACCAACGCTGCAAGCTGATGGCCTGGAACAACTTGCCATGGAAGGAGCCAAGGCAGGCCTT AGCAATCTTCTCGATCAGCTGGATAGCACTTCCTGGGACGGTTTTGATGTCAAGCAAGCACAACAACTGCTAACGAATGC TGCTCAGGCTGCCAACGTCAAAAAAGGTGTGATCATGAAAAGCCTCAGAGCTGCGCTTCTAGGCCGCCTGCAAGGGCCAG ACCTAATCACAACATGGGGATTACTGGCCAGGATCGGGCAAGACTTGAACAGGCTGCGTCGTTGTCTCTGA
Upstream 100 bases:
>100_bases GGACCGTAGTTCAATTGGTTAGAGCACCGCCCTGTCACGGCGGAAGTTGCGGGTTCGAACCCCGTCGGTCCCGTTCTTAT TCCTAATCCTGAGAGTCATT
Downstream 100 bases:
>100_bases GCAGTCGTCTTCGTTTGAATCTTCAGGAGCGATTAAACCCAGGGCCTTGGCCAGCGGCTGGGCCGTGAGGCCTTGAATGC CAACCGTCATAAGGATGGTG
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MKVRVRLAPSPTGTLHIGTARTAVFNWLFARHQGGEFLVRIEDTDKERSKPEFTTNILEGLKWLGLNWDEQPIIQSQHVD DHRAAIQKLLDLDLAYRCYASETELEAMRETQKAQGQAPRYDNRHRNLNPEQEAAFQSEGRSAVVRFRIDDVAAISWKDL VRGPMHWRGSDLGGDMVISRRAPAKEIGDPLYNLVVVVDDAAMSISHVIRGEDHIANTAKQLLIYEALGLPIPQFAHTPL ILNSEGRKLSKRDGVTSISDFQAMGYTAEAMANYMTLLGWSVPEGTDERFTLQQAATVFSFDRVNKAGAKFDWDKLNWLN SQVLHDLPKDQLLHELKPLWSEAGWALPEENWCLDLAELLGPSLTLLKDGVDQARPFFEEPTLQADGLEQLAMEGAKAGL SNLLDQLDSTSWDGFDVKQAQQLLTNAAQAANVKKGVIMKSLRAALLGRLQGPDLITTWGLLARIGQDLNRLRRCL
Sequences:
>Translated_476_residues MKVRVRLAPSPTGTLHIGTARTAVFNWLFARHQGGEFLVRIEDTDKERSKPEFTTNILEGLKWLGLNWDEQPIIQSQHVD DHRAAIQKLLDLDLAYRCYASETELEAMRETQKAQGQAPRYDNRHRNLNPEQEAAFQSEGRSAVVRFRIDDVAAISWKDL VRGPMHWRGSDLGGDMVISRRAPAKEIGDPLYNLVVVVDDAAMSISHVIRGEDHIANTAKQLLIYEALGLPIPQFAHTPL ILNSEGRKLSKRDGVTSISDFQAMGYTAEAMANYMTLLGWSVPEGTDERFTLQQAATVFSFDRVNKAGAKFDWDKLNWLN SQVLHDLPKDQLLHELKPLWSEAGWALPEENWCLDLAELLGPSLTLLKDGVDQARPFFEEPTLQADGLEQLAMEGAKAGL SNLLDQLDSTSWDGFDVKQAQQLLTNAAQAANVKKGVIMKSLRAALLGRLQGPDLITTWGLLARIGQDLNRLRRCL >Mature_476_residues MKVRVRLAPSPTGTLHIGTARTAVFNWLFARHQGGEFLVRIEDTDKERSKPEFTTNILEGLKWLGLNWDEQPIIQSQHVD DHRAAIQKLLDLDLAYRCYASETELEAMRETQKAQGQAPRYDNRHRNLNPEQEAAFQSEGRSAVVRFRIDDVAAISWKDL VRGPMHWRGSDLGGDMVISRRAPAKEIGDPLYNLVVVVDDAAMSISHVIRGEDHIANTAKQLLIYEALGLPIPQFAHTPL ILNSEGRKLSKRDGVTSISDFQAMGYTAEAMANYMTLLGWSVPEGTDERFTLQQAATVFSFDRVNKAGAKFDWDKLNWLN SQVLHDLPKDQLLHELKPLWSEAGWALPEENWCLDLAELLGPSLTLLKDGVDQARPFFEEPTLQADGLEQLAMEGAKAGL SNLLDQLDSTSWDGFDVKQAQQLLTNAAQAANVKKGVIMKSLRAALLGRLQGPDLITTWGLLARIGQDLNRLRRCL
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=356, Percent_Identity=38.4831460674157, Blast_Score=219, Evalue=3e-57, Organism=Homo sapiens, GI62241042, Length=343, Percent_Identity=24.198250728863, Blast_Score=75, Evalue=1e-13, Organism=Escherichia coli, GI1788743, Length=485, Percent_Identity=37.9381443298969, Blast_Score=318, Evalue=4e-88, Organism=Escherichia coli, GI226510925, Length=275, Percent_Identity=32.7272727272727, Blast_Score=126, Evalue=4e-30, Organism=Escherichia coli, GI1786895, Length=318, Percent_Identity=22.3270440251572, Blast_Score=71, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71993394, Length=299, Percent_Identity=36.7892976588629, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17511007, Length=358, Percent_Identity=24.0223463687151, Blast_Score=68, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324540, Length=493, Percent_Identity=30.2231237322515, Blast_Score=216, Evalue=4e-57, Organism=Saccharomyces cerevisiae, GI6321192, Length=233, Percent_Identity=27.0386266094421, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6324742, Length=135, Percent_Identity=29.6296296296296, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI24665321, Length=503, Percent_Identity=34.1948310139165, Blast_Score=247, Evalue=1e-65,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_PROM3 (A2C7H0)
Other databases:
- EMBL: CP000554 - RefSeq: YP_001016695.1 - ProteinModelPortal: A2C7H0 - SMR: A2C7H0 - STRING: A2C7H0 - GeneID: 4778974 - GenomeReviews: CP000554_GR - KEGG: pmf:P9303_06791 - eggNOG: COG0008 - HOGENOM: HBG628189 - OMA: YRCFTSE - ProtClustDB: PRK01406 - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 53290; Mature: 53290
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 251-251
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVRVRLAPSPTGTLHIGTARTAVFNWLFARHQGGEFLVRIEDTDKERSKPEFTTNILEG CEEEEEECCCCCCEEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHH LKWLGLNWDEQPIIQSQHVDDHRAAIQKLLDLDLAYRCYASETELEAMRETQKAQGQAPR HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC YDNRHRNLNPEQEAAFQSEGRSAVVRFRIDDVAAISWKDLVRGPMHWRGSDLGGDMVISR CCCCCCCCCCHHHHHHHHCCCEEEEEEEECCHHHCCHHHHHCCCCCCCCCCCCCCEEEEC RAPAKEIGDPLYNLVVVVDDAAMSISHVIRGEDHIANTAKQLLIYEALGLPIPQFAHTPL CCCHHHHCCHHEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCE ILNSEGRKLSKRDGVTSISDFQAMGYTAEAMANYMTLLGWSVPEGTDERFTLQQAATVFS EECCCCCCCHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHH FDRVNKAGAKFDWDKLNWLNSQVLHDLPKDQLLHELKPLWSEAGWALPEENWCLDLAELL HHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC GPSLTLLKDGVDQARPFFEEPTLQADGLEQLAMEGAKAGLSNLLDQLDSTSWDGFDVKQA CCCHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH QQLLTNAAQAANVKKGVIMKSLRAALLGRLQGPDLITTWGLLARIGQDLNRLRRCL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKVRVRLAPSPTGTLHIGTARTAVFNWLFARHQGGEFLVRIEDTDKERSKPEFTTNILEG CEEEEEECCCCCCEEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHH LKWLGLNWDEQPIIQSQHVDDHRAAIQKLLDLDLAYRCYASETELEAMRETQKAQGQAPR HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC YDNRHRNLNPEQEAAFQSEGRSAVVRFRIDDVAAISWKDLVRGPMHWRGSDLGGDMVISR CCCCCCCCCCHHHHHHHHCCCEEEEEEEECCHHHCCHHHHHCCCCCCCCCCCCCCEEEEC RAPAKEIGDPLYNLVVVVDDAAMSISHVIRGEDHIANTAKQLLIYEALGLPIPQFAHTPL CCCHHHHCCHHEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCE ILNSEGRKLSKRDGVTSISDFQAMGYTAEAMANYMTLLGWSVPEGTDERFTLQQAATVFS EECCCCCCCHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHH FDRVNKAGAKFDWDKLNWLNSQVLHDLPKDQLLHELKPLWSEAGWALPEENWCLDLAELL HHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC GPSLTLLKDGVDQARPFFEEPTLQADGLEQLAMEGAKAGLSNLLDQLDSTSWDGFDVKQA CCCHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH QQLLTNAAQAANVKKGVIMKSLRAALLGRLQGPDLITTWGLLARIGQDLNRLRRCL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA