| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124022268
Identifier: 124022268
GI number: 124022268
Start: 540074
End: 540670
Strand: Reverse
Name: 124022268
Synonym: P9303_05581
Alternate gene names: NA
Gene position: 540670-540074 (Counterclockwise)
Preceding gene: 124022269
Following gene: 124022267
Centisome position: 20.15
GC content: 57.45
Gene sequence:
>597_bases ATGAAAACCGCGCGTGGTCAGGGCCACCTATTCCCAAACCAAGTTCTATCCACAGGGCTCACCCCCCGCCAGGAGCTCAT TCTTAGCCGCGACCTTTTACAAAACTGGCAGAGGCGCATTCAAGGCCATCAAGCCGATCTCTTCCAAGGAGAGCCAGACA TCGCTCGGCAGAGCTCGCTGTTTGGTAGCGATCACGAAACAGTCATCGACCAATTGAAGCCCCTGCAGCTCACCCCTCTC CCCCTGAGCTTCTGGCGCTGGCCTAACAGCCCTCACCATGGCCCAGCCGTTTATCTGGTGATGGACCGCCCAGCAGACCT CACCACTCCTTTATTGCTTTATGTGGGCGAAACGATTGCTGCAGATCGCCGCTGGAAGGGCGAGCATGATTGCAAGGCCT ACCTGGCGGCCTATGCCGAAGCCCTTGCCAAGGCAGGACTACCAAGCCAGCTCAGCATCCGTTTTTGGAGCGATGTTCCC GAGAGCACCAAAGCCCGTCGACAGCTCGAGCAACAACTGATCCAGCGCTGGCTGCCACCGTTCAACAAAGAAACAAGAGC TCGCTGGAGCACCCCGTTCACAGCTGAATGCAGCTAA
Upstream 100 bases:
>100_bases GTAACGTCCGCCTGAATGAGCGATCCCCAAAGGGTGATTGGCATCTTGCACTTTGAGCCAACAAGCGCAGCTCCAAAGCT TCCGCAAAGGTGATCAATCG
Downstream 100 bases:
>100_bases ACGGCACGGCTAACATCGCGCCACCTCATCAACATCCCATGGAGATTTGCCTTTTTCCAGCAACCTTGCAGAGCTGGACT GGCGATGTGCTCATGGTGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MKTARGQGHLFPNQVLSTGLTPRQELILSRDLLQNWQRRIQGHQADLFQGEPDIARQSSLFGSDHETVIDQLKPLQLTPL PLSFWRWPNSPHHGPAVYLVMDRPADLTTPLLLYVGETIAADRRWKGEHDCKAYLAAYAEALAKAGLPSQLSIRFWSDVP ESTKARRQLEQQLIQRWLPPFNKETRARWSTPFTAECS
Sequences:
>Translated_198_residues MKTARGQGHLFPNQVLSTGLTPRQELILSRDLLQNWQRRIQGHQADLFQGEPDIARQSSLFGSDHETVIDQLKPLQLTPL PLSFWRWPNSPHHGPAVYLVMDRPADLTTPLLLYVGETIAADRRWKGEHDCKAYLAAYAEALAKAGLPSQLSIRFWSDVP ESTKARRQLEQQLIQRWLPPFNKETRARWSTPFTAECS >Mature_198_residues MKTARGQGHLFPNQVLSTGLTPRQELILSRDLLQNWQRRIQGHQADLFQGEPDIARQSSLFGSDHETVIDQLKPLQLTPL PLSFWRWPNSPHHGPAVYLVMDRPADLTTPLLLYVGETIAADRRWKGEHDCKAYLAAYAEALAKAGLPSQLSIRFWSDVP ESTKARRQLEQQLIQRWLPPFNKETRARWSTPFTAECS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22648; Mature: 22648
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTARGQGHLFPNQVLSTGLTPRQELILSRDLLQNWQRRIQGHQADLFQGEPDIARQSSL CCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHH FGSDHETVIDQLKPLQLTPLPLSFWRWPNSPHHGPAVYLVMDRPADLTTPLLLYVGETIA CCCCHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH ADRRWKGEHDCKAYLAAYAEALAKAGLPSQLSIRFWSDVPESTKARRQLEQQLIQRWLPP HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCC FNKETRARWSTPFTAECS CCCCHHHHCCCCCCCCCC >Mature Secondary Structure MKTARGQGHLFPNQVLSTGLTPRQELILSRDLLQNWQRRIQGHQADLFQGEPDIARQSSL CCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCHHHHHHH FGSDHETVIDQLKPLQLTPLPLSFWRWPNSPHHGPAVYLVMDRPADLTTPLLLYVGETIA CCCCHHHHHHHCCCCCCCCCCHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHH ADRRWKGEHDCKAYLAAYAEALAKAGLPSQLSIRFWSDVPESTKARRQLEQQLIQRWLPP HCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCC FNKETRARWSTPFTAECS CCCCHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA