| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021858
Identifier: 124021858
GI number: 124021858
Start: 160059
End: 160859
Strand: Direct
Name: 124021858
Synonym: P9303_01451
Alternate gene names: NA
Gene position: 160059-160859 (Clockwise)
Preceding gene: 124021857
Following gene: 124021859
Centisome position: 5.97
GC content: 46.82
Gene sequence:
>801_bases ATGAATGTTCATGAGCGCAAGATGCTTGATATCCTGCGCCAAGGACGCGAAGAGTTTGGCGTCGTAGCAGCCAAGGCTGA ATTCGAGGCTGAGGGCACACGAACTGATGAGTTGTTGCGCTTATTAGAAATTGCTAACAAGGCTGATGTTGGCTTGGCTT TGAAGATTGGTGGCTGTGAGGCGATTCGTGACTTGCTTGAGGCCAAGCAGTTTGGCGTGAGGTATATCATTGCTCCCATG GTGGAAACACCTTATGCACTCTCGAAATATATTGCAGCCAAAGGCAAGATCTATTCAGATCTTGAACGTGAAGACGTGAC GTTCTTGTTTAACGTTGAGACATCGACAGCTTTTGACAATATTGAAGCTATGGTTGAATTGTCAGCAAAGAATCCTGGTT GTGATGGTGTCGTTTTTGGTCGTGTTGATTTCAGTGGATCGCTAGGCCTTGGGCGAGAAGGAATTGAAACAGAGCAGGTC ACTTCCGCGGGTGAAGCGGTTGCTCGCTTATGTAAGGATCATGGTCTTGAATTTGTTGTCGGAGGGGCTGTCTCCAGTGA TGCATTGGTGAGTTTGAGGCGGTTCAATAATGTTCATCTTGATCGCTTCGAAACTCGCAAGGTAGTTTTTAAGGCTGCAG CGCTTGGTGAGAAGAATTTGCCAGATGCTTTACGTCAGGCAGTGCATTTTGAGCTGCTTTGGCTTCTCAATAAGCGTGAT TACTATGGGTTGATGCACCATGAGGATCAGACTCGTATCCAAATGCTTGAAAGTCGCTGGAAGGTTTTAGAGCAAGGGTG A
Upstream 100 bases:
>100_bases TGAGGATTTCGTGACACGCTTTATTCCAAAAAAAGCGTCTTAACTCCCTTACTATTTTGTTATTTGTGCTATAATAAATA TATTCTGGATTGCTTTTGGC
Downstream 100 bases:
>100_bases ATTGTTCTTCAGTGTGATGTCCATCGATGAATAGCTCTGACCAGGATCATGGTTTATTGGTTATTACCGGCGCTACTGGT TGGGTCGGTCGCACAGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MNVHERKMLDILRQGREEFGVVAAKAEFEAEGTRTDELLRLLEIANKADVGLALKIGGCEAIRDLLEAKQFGVRYIIAPM VETPYALSKYIAAKGKIYSDLEREDVTFLFNVETSTAFDNIEAMVELSAKNPGCDGVVFGRVDFSGSLGLGREGIETEQV TSAGEAVARLCKDHGLEFVVGGAVSSDALVSLRRFNNVHLDRFETRKVVFKAAALGEKNLPDALRQAVHFELLWLLNKRD YYGLMHHEDQTRIQMLESRWKVLEQG
Sequences:
>Translated_266_residues MNVHERKMLDILRQGREEFGVVAAKAEFEAEGTRTDELLRLLEIANKADVGLALKIGGCEAIRDLLEAKQFGVRYIIAPM VETPYALSKYIAAKGKIYSDLEREDVTFLFNVETSTAFDNIEAMVELSAKNPGCDGVVFGRVDFSGSLGLGREGIETEQV TSAGEAVARLCKDHGLEFVVGGAVSSDALVSLRRFNNVHLDRFETRKVVFKAAALGEKNLPDALRQAVHFELLWLLNKRD YYGLMHHEDQTRIQMLESRWKVLEQG >Mature_266_residues MNVHERKMLDILRQGREEFGVVAAKAEFEAEGTRTDELLRLLEIANKADVGLALKIGGCEAIRDLLEAKQFGVRYIIAPM VETPYALSKYIAAKGKIYSDLEREDVTFLFNVETSTAFDNIEAMVELSAKNPGCDGVVFGRVDFSGSLGLGREGIETEQV TSAGEAVARLCKDHGLEFVVGGAVSSDALVSLRRFNNVHLDRFETRKVVFKAAALGEKNLPDALRQAVHFELLWLLNKRD YYGLMHHEDQTRIQMLESRWKVLEQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29722; Mature: 29722
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVHERKMLDILRQGREEFGVVAAKAEFEAEGTRTDELLRLLEIANKADVGLALKIGGCE CCCHHHHHHHHHHHCHHHHCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCHH AIRDLLEAKQFGVRYIIAPMVETPYALSKYIAAKGKIYSDLEREDVTFLFNVETSTAFDN HHHHHHHHHHHCHHEEEEHHHCCCHHHHHHHHHCCCHHHCCCCCCEEEEEEECCCHHHHH IEAMVELSAKNPGCDGVVFGRVDFSGSLGLGREGIETEQVTSAGEAVARLCKDHGLEFVV HHHHEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE GGAVSSDALVSLRRFNNVHLDRFETRKVVFKAAALGEKNLPDALRQAVHFELLWLLNKRD CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC YYGLMHHEDQTRIQMLESRWKVLEQG CCCCEECCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNVHERKMLDILRQGREEFGVVAAKAEFEAEGTRTDELLRLLEIANKADVGLALKIGGCE CCCHHHHHHHHHHHCHHHHCEEEEECCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCHH AIRDLLEAKQFGVRYIIAPMVETPYALSKYIAAKGKIYSDLEREDVTFLFNVETSTAFDN HHHHHHHHHHHCHHEEEEHHHCCCHHHHHHHHHCCCHHHCCCCCCEEEEEEECCCHHHHH IEAMVELSAKNPGCDGVVFGRVDFSGSLGLGREGIETEQVTSAGEAVARLCKDHGLEFVV HHHHEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEE GGAVSSDALVSLRRFNNVHLDRFETRKVVFKAAALGEKNLPDALRQAVHFELLWLLNKRD CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCC YYGLMHHEDQTRIQMLESRWKVLEQG CCCCEECCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA