| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021859
Identifier: 124021859
GI number: 124021859
Start: 160886
End: 161851
Strand: Direct
Name: 124021859
Synonym: P9303_01461
Alternate gene names: NA
Gene position: 160886-161851 (Clockwise)
Preceding gene: 124021858
Following gene: 124021860
Centisome position: 6.0
GC content: 47.1
Gene sequence:
>966_bases ATGAATAGCTCTGACCAGGATCATGGTTTATTGGTTATTACCGGCGCTACTGGTTGGGTCGGTCGCACAGCAGTGCACGA GTTGCAAAGGTTGTTGACACCTGAGAATTTTTTGGAGCGTGTTCGTCTATTTGCAAGCCGCTCTGGATCGATTCTTTCCA CTGGCTACAACGATTTAGCCCCGTTCAGTATTCCTGTGTTCCCTCTTAAGGACTTGACGGATCTAGCAGCATCTGAACCT TTGGGCGCTGTTCTGCACACAGCTTTTTTGACACGAGATCGTGTTGCACAAGTCGGTCAGGATGACTACGTGGCGACCAA TCGTTGGATTACTGCTCAGTTGGTAGCTGCTTTGCAAGCTTCCCCTGCAGCTCGGGCAGTTGTGATCTCATCTGGTGCGG CGGCTGTTCATGATCATGATTCAGATCTCGATCTGAAATCAGATCCTTATGGAGTTCTCAAATGGGAAGAGGAACAGCTT TTGTCGAGCTTGGTTCCAAGAAGCTTGGTGTTGCGTCTTTATGCTCTATCAGGTCGCTTTATCCGTGATCCAAGCAGATT CGCATTGGGCGATTTTTTACTGAAGGCGCTGAGCAGGCAGCCGATTCGTATCGATTCAACCAATCCTGTTCTGCGTAGTT ATGGACATGCTGGCAATATTACGGCGTTTGCTTGGAGATGGGTACTGAGTAACAATTCAAACCCTATTAGAAATATTTTG GCTGCTACAAGTGTCACAACCGATTTGTTGGAGCTAGCTCAAGAAATCACACGCGTTTATAATTTGCCCCCTGTGCAATC TAGTGTGGACCCCGCTGCTGTCCCTAATCGTTACATTGCGGACACAGAGCCTTTTTTGGCTGCCTTGAGTCAGCATGGTC TTGTTTCGATGTCTATAGAGGATCAGTTGCATGACACGACAAGAGGATTGAGTAATTTAGAACAATCCAACATTTGTGAT GATTGA
Upstream 100 bases:
>100_bases GGTTGATGCACCATGAGGATCAGACTCGTATCCAAATGCTTGAAAGTCGCTGGAAGGTTTTAGAGCAAGGGTGAATTGTT CTTCAGTGTGATGTCCATCG
Downstream 100 bases:
>100_bases TATGTCTTTATACCCTCAGCCTTGGCCTCCTTTCCCAGTTAATGAAATTTACCCAAAATCAGTGAGAGGGCTGATAGACG ATTGGGCTCGTGCACCAGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MNSSDQDHGLLVITGATGWVGRTAVHELQRLLTPENFLERVRLFASRSGSILSTGYNDLAPFSIPVFPLKDLTDLAASEP LGAVLHTAFLTRDRVAQVGQDDYVATNRWITAQLVAALQASPAARAVVISSGAAAVHDHDSDLDLKSDPYGVLKWEEEQL LSSLVPRSLVLRLYALSGRFIRDPSRFALGDFLLKALSRQPIRIDSTNPVLRSYGHAGNITAFAWRWVLSNNSNPIRNIL AATSVTTDLLELAQEITRVYNLPPVQSSVDPAAVPNRYIADTEPFLAALSQHGLVSMSIEDQLHDTTRGLSNLEQSNICD D
Sequences:
>Translated_321_residues MNSSDQDHGLLVITGATGWVGRTAVHELQRLLTPENFLERVRLFASRSGSILSTGYNDLAPFSIPVFPLKDLTDLAASEP LGAVLHTAFLTRDRVAQVGQDDYVATNRWITAQLVAALQASPAARAVVISSGAAAVHDHDSDLDLKSDPYGVLKWEEEQL LSSLVPRSLVLRLYALSGRFIRDPSRFALGDFLLKALSRQPIRIDSTNPVLRSYGHAGNITAFAWRWVLSNNSNPIRNIL AATSVTTDLLELAQEITRVYNLPPVQSSVDPAAVPNRYIADTEPFLAALSQHGLVSMSIEDQLHDTTRGLSNLEQSNICD D >Mature_321_residues MNSSDQDHGLLVITGATGWVGRTAVHELQRLLTPENFLERVRLFASRSGSILSTGYNDLAPFSIPVFPLKDLTDLAASEP LGAVLHTAFLTRDRVAQVGQDDYVATNRWITAQLVAALQASPAARAVVISSGAAAVHDHDSDLDLKSDPYGVLKWEEEQL LSSLVPRSLVLRLYALSGRFIRDPSRFALGDFLLKALSRQPIRIDSTNPVLRSYGHAGNITAFAWRWVLSNNSNPIRNIL AATSVTTDLLELAQEITRVYNLPPVQSSVDPAAVPNRYIADTEPFLAALSQHGLVSMSIEDQLHDTTRGLSNLEQSNICD D
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35091; Mature: 35091
Theoretical pI: Translated: 5.33; Mature: 5.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSSDQDHGLLVITGATGWVGRTAVHELQRLLTPENFLERVRLFASRSGSILSTGYNDLA CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCCC PFSIPVFPLKDLTDLAASEPLGAVLHTAFLTRDRVAQVGQDDYVATNRWITAQLVAALQA CCEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHC SPAARAVVISSGAAAVHDHDSDLDLKSDPYGVLKWEEEQLLSSLVPRSLVLRLYALSGRF CCCCEEEEEECCCEEECCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCE IRDPSRFALGDFLLKALSRQPIRIDSTNPVLRSYGHAGNITAFAWRWVLSNNSNPIRNIL ECCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHH AATSVTTDLLELAQEITRVYNLPPVQSSVDPAAVPNRYIADTEPFLAALSQHGLVSMSIE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEHH DQLHDTTRGLSNLEQSNICDD HHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNSSDQDHGLLVITGATGWVGRTAVHELQRLLTPENFLERVRLFASRSGSILSTGYNDLA CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCCC PFSIPVFPLKDLTDLAASEPLGAVLHTAFLTRDRVAQVGQDDYVATNRWITAQLVAALQA CCEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHC SPAARAVVISSGAAAVHDHDSDLDLKSDPYGVLKWEEEQLLSSLVPRSLVLRLYALSGRF CCCCEEEEEECCCEEECCCCCCCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCE IRDPSRFALGDFLLKALSRQPIRIDSTNPVLRSYGHAGNITAFAWRWVLSNNSNPIRNIL ECCCHHHHHHHHHHHHHCCCCEEECCCCHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHH AATSVTTDLLELAQEITRVYNLPPVQSSVDPAAVPNRYIADTEPFLAALSQHGLVSMSIE HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCEEEEEHH DQLHDTTRGLSNLEQSNICDD HHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA