| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124021821
Identifier: 124021821
GI number: 124021821
Start: 107923
End: 109293
Strand: Reverse
Name: 124021821
Synonym: P9303_01081
Alternate gene names: NA
Gene position: 109293-107923 (Counterclockwise)
Preceding gene: 124021822
Following gene: 124021820
Centisome position: 4.07
GC content: 37.71
Gene sequence:
>1371_bases ATGACTCGCTACCCCTTCCCAAAAGAAACGGATAAAGCTCTCTACAGAGATGCAGTAAGTAATGATGCGTACTATGGATT GCCACAACCAGTTAGCTTCTGCAAATTATGTGTTATTAGTAATCAACGTCCCTCAAGCACGATTGAATTTAAAAATAACG GTACAAAGCCTAAAACAGTAATACAATTTTCAAAGGACGAAATATGTGATGCCTGTCGAGCTAAGAAGCAAAAATCGGCA ATTGATTGGGATGAAAGGGCAAAGGAGCTGAAAAATCTATGTGATCGCTTTAGAAAAACAGATGGAGGATACGATTGCTT AATTCCAGGGAGTGGGGGAAAGGACAGTTTTATGCAAGCACATATTTTAAAGTATGAATATGGGATGAATCCATTAACAT GTACTTGGGCACCAAATATTTATACTGATTGGGGCTGGAAAAATCATCAGGCATGGATTCATGCAGGATTTGACAATATA CTTTTTACACCGAATGGAAAAGTTCATCGGCTGATCACAAGATTGGCAGTAGAAAATCTCTTTCACCCTTTTCAACCTTT TATTCTAGGGCAAAAAAATCTCGGACCAAAGATTGCAGATTTATATAATATTAATCTCGTCTTTTATGGTGAAAACGAGG CTGAGTATGGGAATCCTATGGCTGATATGTCCTCTGCACTAAGAAACTGGGAGTATTTTACCGCTTCTAATGAAGATGAA ATTTATTTAGGAGGAGCATCACTCAGTGAACTCAGAGAATTAGGATTGAAGGATAGTGATTGGGAGATATACCTACCAAT CGACCCTAAGATTATCAGTAAAAAGCAAATAGAAGTGCACTATCTTGGTTATTATAAAAAATGGCATCCCCAGGCTGCTT ATTATTACGCGATTGCGCATGGCAATTTTCAGAGTTCGCCAGAAAGAACAATAGGCACATACAGTACATACAATTCAATT GATGATAAGATCGATGATTTCCATTATCATACAACTTTTATCAAATTTGGAATAGGGCGTGCTACATATGATGCTTCACA AGAAATACGTTCAGGGGATCTAGTAAGAGAAGAAGGGGTTGCATTGGTGAAAAAGTTTGATGGAGAATATCCTGAAAGGT GGGCGGATGAAATATTTAAATACCTAAGTCTTCCTATGAATGAATTCCCAATAGCATCAAAGATGTTTGAAGAGCCAATC TTTAACAAGACATACTATGAGCGACTGTGTGATAAATTCAGATCACCTCATTTATGGACATGGGATCGTGACATCGGATG GAAGTTACGCCATCAGGTATCGAACAATAATATCGATCAAAAAGAAACTGATCTTCTAGCATGGGAAGGCAATCAAGCAA AAATACAGTAA
Upstream 100 bases:
>100_bases CGCCTAGTGATATAATATTAGGTTGGCTTGACAGTAGAAAATATGTGAATGATTCTCAAATCTGACTTATAATGTAAAAT ATGAAAACTAACTTGGAGAT
Downstream 100 bases:
>100_bases AATATATGGCACTATCTAAAAGAATTATTGCACGATTAGATGTGAAGGGAAATAAGATCATTAAAGGTGTCCGTTTTGAA GGCCTACGAGTAATTGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 456; Mature: 455
Protein sequence:
>456_residues MTRYPFPKETDKALYRDAVSNDAYYGLPQPVSFCKLCVISNQRPSSTIEFKNNGTKPKTVIQFSKDEICDACRAKKQKSA IDWDERAKELKNLCDRFRKTDGGYDCLIPGSGGKDSFMQAHILKYEYGMNPLTCTWAPNIYTDWGWKNHQAWIHAGFDNI LFTPNGKVHRLITRLAVENLFHPFQPFILGQKNLGPKIADLYNINLVFYGENEAEYGNPMADMSSALRNWEYFTASNEDE IYLGGASLSELRELGLKDSDWEIYLPIDPKIISKKQIEVHYLGYYKKWHPQAAYYYAIAHGNFQSSPERTIGTYSTYNSI DDKIDDFHYHTTFIKFGIGRATYDASQEIRSGDLVREEGVALVKKFDGEYPERWADEIFKYLSLPMNEFPIASKMFEEPI FNKTYYERLCDKFRSPHLWTWDRDIGWKLRHQVSNNNIDQKETDLLAWEGNQAKIQ
Sequences:
>Translated_456_residues MTRYPFPKETDKALYRDAVSNDAYYGLPQPVSFCKLCVISNQRPSSTIEFKNNGTKPKTVIQFSKDEICDACRAKKQKSA IDWDERAKELKNLCDRFRKTDGGYDCLIPGSGGKDSFMQAHILKYEYGMNPLTCTWAPNIYTDWGWKNHQAWIHAGFDNI LFTPNGKVHRLITRLAVENLFHPFQPFILGQKNLGPKIADLYNINLVFYGENEAEYGNPMADMSSALRNWEYFTASNEDE IYLGGASLSELRELGLKDSDWEIYLPIDPKIISKKQIEVHYLGYYKKWHPQAAYYYAIAHGNFQSSPERTIGTYSTYNSI DDKIDDFHYHTTFIKFGIGRATYDASQEIRSGDLVREEGVALVKKFDGEYPERWADEIFKYLSLPMNEFPIASKMFEEPI FNKTYYERLCDKFRSPHLWTWDRDIGWKLRHQVSNNNIDQKETDLLAWEGNQAKIQ >Mature_455_residues TRYPFPKETDKALYRDAVSNDAYYGLPQPVSFCKLCVISNQRPSSTIEFKNNGTKPKTVIQFSKDEICDACRAKKQKSAI DWDERAKELKNLCDRFRKTDGGYDCLIPGSGGKDSFMQAHILKYEYGMNPLTCTWAPNIYTDWGWKNHQAWIHAGFDNIL FTPNGKVHRLITRLAVENLFHPFQPFILGQKNLGPKIADLYNINLVFYGENEAEYGNPMADMSSALRNWEYFTASNEDEI YLGGASLSELRELGLKDSDWEIYLPIDPKIISKKQIEVHYLGYYKKWHPQAAYYYAIAHGNFQSSPERTIGTYSTYNSID DKIDDFHYHTTFIKFGIGRATYDASQEIRSGDLVREEGVALVKKFDGEYPERWADEIFKYLSLPMNEFPIASKMFEEPIF NKTYYERLCDKFRSPHLWTWDRDIGWKLRHQVSNNNIDQKETDLLAWEGNQAKIQ
Specific function: Unknown
COG id: COG0037
COG function: function code D; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53031; Mature: 52900
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRYPFPKETDKALYRDAVSNDAYYGLPQPVSFCKLCVISNQRPSSTIEFKNNGTKPKTV CCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHEEEECCCCCCCEEEECCCCCCCCEE IQFSKDEICDACRAKKQKSAIDWDERAKELKNLCDRFRKTDGGYDCLIPGSGGKDSFMQA EEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHH HILKYEYGMNPLTCTWAPNIYTDWGWKNHQAWIHAGFDNILFTPNGKVHRLITRLAVENL HHEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCEEECCCCHHHHHHHHHHHHHH FHPFQPFILGQKNLGPKIADLYNINLVFYGENEAEYGNPMADMSSALRNWEYFTASNEDE CCCCCHHEECCCCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCEEEECCCCCE IYLGGASLSELRELGLKDSDWEIYLPIDPKIISKKQIEVHYLGYYKKWHPQAAYYYAIAH EEECCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEEHHCCCCCEEEEEEEE GNFQSSPERTIGTYSTYNSIDDKIDDFHYHTTFIKFGIGRATYDASQEIRSGDLVREEGV CCCCCCCCCCCCCCHHHCCHHHHHHHHEHEEEEEEECCCCCCCCHHHHHHCCCCCHHHHH ALVKKFDGEYPERWADEIFKYLSLPMNEFPIASKMFEEPIFNKTYYERLCDKFRSPHLWT HHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCEEE WDRDIGWKLRHQVSNNNIDQKETDLLAWEGNQAKIQ ECCCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCC >Mature Secondary Structure TRYPFPKETDKALYRDAVSNDAYYGLPQPVSFCKLCVISNQRPSSTIEFKNNGTKPKTV CCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHEEEECCCCCCCEEEECCCCCCCCEE IQFSKDEICDACRAKKQKSAIDWDERAKELKNLCDRFRKTDGGYDCLIPGSGGKDSFMQA EEECHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHH HILKYEYGMNPLTCTWAPNIYTDWGWKNHQAWIHAGFDNILFTPNGKVHRLITRLAVENL HHEEEECCCCCEEEEECCCCCCCCCCCCCCEEEEECCCCEEECCCCHHHHHHHHHHHHHH FHPFQPFILGQKNLGPKIADLYNINLVFYGENEAEYGNPMADMSSALRNWEYFTASNEDE CCCCCHHEECCCCCCCCEEEEEEEEEEEECCCCCCCCCCHHHHHHHHHCCEEEECCCCCE IYLGGASLSELRELGLKDSDWEIYLPIDPKIISKKQIEVHYLGYYKKWHPQAAYYYAIAH EEECCCCHHHHHHCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEEHHCCCCCEEEEEEEE GNFQSSPERTIGTYSTYNSIDDKIDDFHYHTTFIKFGIGRATYDASQEIRSGDLVREEGV CCCCCCCCCCCCCCHHHCCHHHHHHHHEHEEEEEEECCCCCCCCHHHHHHCCCCCHHHHH ALVKKFDGEYPERWADEIFKYLSLPMNEFPIASKMFEEPIFNKTYYERLCDKFRSPHLWT HHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCEEE WDRDIGWKLRHQVSNNNIDQKETDLLAWEGNQAKIQ ECCCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA