| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
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The map label for this gene is 124021793
Identifier: 124021793
GI number: 124021793
Start: 77146
End: 77565
Strand: Direct
Name: 124021793
Synonym: P9303_00781
Alternate gene names: NA
Gene position: 77146-77565 (Clockwise)
Preceding gene: 124021792
Following gene: 124021794
Centisome position: 2.88
GC content: 50.95
Gene sequence:
>420_bases ATGCTTGGATCGCTCGGCTGGTTGCTGCAATGGCCCATTCGGGCCCTCATTTTGTTATTGGTTGCTGCGTTGCCCCTTGG CATTGAGATGGCCAATTTCAGCACAGCATTTTGGTCGGCGGTGATGATTGGCCTATTGGGTACGTTGTTGATCGTGCCTC TCAAGTTGCTGTTGGGTCCATTCTGGGCAATTACGTCGTTGGGGGGGCTGATCTGGCCAGTGTCGTTTTTGTTCAACTGG TTGATCACGATCCTTTTATTTGCTCTGGCAGCCTGGCTGATTAATGGTTTTCGGCTCAAGAACGGTTTGCTTAGTGCCAT CTGCGGCGCTGTCTTTTACAGCGTTGTGAGCACGATTGTGTTGCGATCTCTCGGCATCGCTGATATTGAGTTCACTAGAG CTGCTTTGCTTTCAGCCTGA
Upstream 100 bases:
>100_bases TTGTGCGGGGCTTGCGTGAAGCTCTCAGTACGCCCAAATCTGCAGTAATTCACTAACGTGAATCACTGTCTAGTCAGCTG CTTTGCATAGGTTGTTTTAA
Downstream 100 bases:
>100_bases GAGTTCAAGGCATTGGTTAGAAGGTCATCAGCTTTGGAGGCAGTCTGGAATAGCCCGTTCATGGCATCTGCTCATAGGCT AAGCAGCTGCCCGTTACGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 139; Mature: 139
Protein sequence:
>139_residues MLGSLGWLLQWPIRALILLLVAALPLGIEMANFSTAFWSAVMIGLLGTLLIVPLKLLLGPFWAITSLGGLIWPVSFLFNW LITILLFALAAWLINGFRLKNGLLSAICGAVFYSVVSTIVLRSLGIADIEFTRAALLSA
Sequences:
>Translated_139_residues MLGSLGWLLQWPIRALILLLVAALPLGIEMANFSTAFWSAVMIGLLGTLLIVPLKLLLGPFWAITSLGGLIWPVSFLFNW LITILLFALAAWLINGFRLKNGLLSAICGAVFYSVVSTIVLRSLGIADIEFTRAALLSA >Mature_139_residues MLGSLGWLLQWPIRALILLLVAALPLGIEMANFSTAFWSAVMIGLLGTLLIVPLKLLLGPFWAITSLGGLIWPVSFLFNW LITILLFALAAWLINGFRLKNGLLSAICGAVFYSVVSTIVLRSLGIADIEFTRAALLSA
Specific function: Unknown
COG id: COG1950
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15042; Mature: 15042
Theoretical pI: Translated: 10.24; Mature: 10.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGSLGWLLQWPIRALILLLVAALPLGIEMANFSTAFWSAVMIGLLGTLLIVPLKLLLGP CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWAITSLGGLIWPVSFLFNWLITILLFALAAWLINGFRLKNGLLSAICGAVFYSVVSTIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRSLGIADIEFTRAALLSA HHHCCCHHHHHHHHHHHCC >Mature Secondary Structure MLGSLGWLLQWPIRALILLLVAALPLGIEMANFSTAFWSAVMIGLLGTLLIVPLKLLLGP CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FWAITSLGGLIWPVSFLFNWLITILLFALAAWLINGFRLKNGLLSAICGAVFYSVVSTIV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRSLGIADIEFTRAALLSA HHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA