| Definition | Prochlorococcus marinus str. MIT 9303, complete genome. |
|---|---|
| Accession | NC_008820 |
| Length | 2,682,675 |
Click here to switch to the map view.
The map label for this gene is 124021792
Identifier: 124021792
GI number: 124021792
Start: 76325
End: 77101
Strand: Direct
Name: 124021792
Synonym: P9303_00771
Alternate gene names: NA
Gene position: 76325-77101 (Clockwise)
Preceding gene: 124021789
Following gene: 124021793
Centisome position: 2.85
GC content: 57.27
Gene sequence:
>777_bases ATGACCCGCCTCGCTCAGTTGCCAACAGCCTTGCGTCAGCGTCTCGAGCAGCGCTCGGCCTTCAAGGTGATCGCTGGTTT GATGAATTTCGAGGCCCTCTCGGTGGCGCAGGTGGCGCGGGCTGCTGGCCACGGTGGCGCTGATCTGATTGATGTGGCTT GTGACCCGGCGCTGGTGCAACTGGCGATCCGGGAATCCGCTGGAGTTCCGGTTTGTGTGTCAGCGGTGGAGCCTGAGCTG TTCCCCGCCGCTGTTGCAGCTGGTGCTGCCATGGTGGAAATCGGAAATTTCGATGCTTTTTATCCTCAGGGCCGGATCTT TGGTGCCGCGGAAGTCTTTGAGCTGACTCGTTTAACCAGGGCGTTGTTGCCTGAGGTGGTGTTGAGTGTGACTGTGCCCC ATGTGTTGCCGATGGATCATCAGGAGCAACTGGCAGTGGATCTAGTGGCTGCCGGTGCCGATCTGATTCAGACGGAGGGC GGCACTAGCGCTAAGCCATTTAGTGCTGGAAGCCTTGGCTTGATTGAGAAAGCTGCTCCCACTTTGGCCGCTGTTCACAG TATTTCTGCAGCACTGAAGGCTGCTGATCGGGTAGTTCCTGTGCTTTGTGCTTCTGGTTTATCGGCAGTGACGGTGCCCA TGGCTATTGCTGCTGGTGCCGCTGGTGTAGGTGTTGGATCTGGGGTGAACCGTCTCAATGATGAACTGGCGATGGTTGCT GTTGTGCGGGGCTTGCGTGAAGCTCTCAGTACGCCCAAATCTGCAGTAATTCACTAA
Upstream 100 bases:
>100_bases GAGCTGGATGAGGCCATAGCGCACTGGTCACTCAGCTGAGGCCAGTCTGCCGTGCGGGAGCCTGGCTAATGGGAATATGG ATCTACAGATCGTTGATTGA
Downstream 100 bases:
>100_bases CGTGAATCACTGTCTAGTCAGCTGCTTTGCATAGGTTGTTTTAAATGCTTGGATCGCTCGGCTGGTTGCTGCAATGGCCC ATTCGGGCCCTCATTTTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 258; Mature: 257
Protein sequence:
>258_residues MTRLAQLPTALRQRLEQRSAFKVIAGLMNFEALSVAQVARAAGHGGADLIDVACDPALVQLAIRESAGVPVCVSAVEPEL FPAAVAAGAAMVEIGNFDAFYPQGRIFGAAEVFELTRLTRALLPEVVLSVTVPHVLPMDHQEQLAVDLVAAGADLIQTEG GTSAKPFSAGSLGLIEKAAPTLAAVHSISAALKAADRVVPVLCASGLSAVTVPMAIAAGAAGVGVGSGVNRLNDELAMVA VVRGLREALSTPKSAVIH
Sequences:
>Translated_258_residues MTRLAQLPTALRQRLEQRSAFKVIAGLMNFEALSVAQVARAAGHGGADLIDVACDPALVQLAIRESAGVPVCVSAVEPEL FPAAVAAGAAMVEIGNFDAFYPQGRIFGAAEVFELTRLTRALLPEVVLSVTVPHVLPMDHQEQLAVDLVAAGADLIQTEG GTSAKPFSAGSLGLIEKAAPTLAAVHSISAALKAADRVVPVLCASGLSAVTVPMAIAAGAAGVGVGSGVNRLNDELAMVA VVRGLREALSTPKSAVIH >Mature_257_residues TRLAQLPTALRQRLEQRSAFKVIAGLMNFEALSVAQVARAAGHGGADLIDVACDPALVQLAIRESAGVPVCVSAVEPELF PAAVAAGAAMVEIGNFDAFYPQGRIFGAAEVFELTRLTRALLPEVVLSVTVPHVLPMDHQEQLAVDLVAAGADLIQTEGG TSAKPFSAGSLGLIEKAAPTLAAVHSISAALKAADRVVPVLCASGLSAVTVPMAIAAGAAGVGVGSGVNRLNDELAMVAV VRGLREALSTPKSAVIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26280; Mature: 26149
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLAQLPTALRQRLEQRSAFKVIAGLMNFEALSVAQVARAAGHGGADLIDVACDPALVQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHH LAIRESAGVPVCVSAVEPELFPAAVAAGAAMVEIGNFDAFYPQGRIFGAAEVFELTRLTR HHHHHCCCCCEEEECCCCHHHHHHHHCCHHEEEECCCCCCCCCCCEECHHHHHHHHHHHH ALLPEVVLSVTVPHVLPMDHQEQLAVDLVAAGADLIQTEGGTSAKPFSAGSLGLIEKAAP HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCHHHHHHHH TLAAVHSISAALKAADRVVPVLCASGLSAVTVPMAIAAGAAGVGVGSGVNRLNDELAMVA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH VVRGLREALSTPKSAVIH HHHHHHHHHCCCHHHCCC >Mature Secondary Structure TRLAQLPTALRQRLEQRSAFKVIAGLMNFEALSVAQVARAAGHGGADLIDVACDPALVQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCHHHHH LAIRESAGVPVCVSAVEPELFPAAVAAGAAMVEIGNFDAFYPQGRIFGAAEVFELTRLTR HHHHHCCCCCEEEECCCCHHHHHHHHCCHHEEEECCCCCCCCCCCEECHHHHHHHHHHHH ALLPEVVLSVTVPHVLPMDHQEQLAVDLVAAGADLIQTEGGTSAKPFSAGSLGLIEKAAP HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCHHHHHHHH TLAAVHSISAALKAADRVVPVLCASGLSAVTVPMAIAAGAAGVGVGSGVNRLNDELAMVA HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH VVRGLREALSTPKSAVIH HHHHHHHHHCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA