| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969435
Identifier: 123969435
GI number: 123969435
Start: 1639403
End: 1640230
Strand: Direct
Name: 123969435
Synonym: A9601_19031
Alternate gene names: NA
Gene position: 1639403-1640230 (Clockwise)
Preceding gene: 123969434
Following gene: 123969437
Centisome position: 98.17
GC content: 27.66
Gene sequence:
>828_bases ATGATTGAAACATTAGGCTGGCACAAGGATCAATGGTTGGATATTGATAGAATATTTATTGCTGCTAATAATAGAGGATT AAAATTTGCAGATGGTATATTTGAAACCATTTTGATAAAAGAAAACAAACCTATTCTTTTTGATGATCATCTGAAAAGAT TAGAAAAAAGTAGCAAGATTTTAAATATTAACCTCAAAATAAATAAATTAACTTTGAGACAACTTATTCACGATGGAATT AAAAAGTTATCGCTTAAAAAAGATCAATTTGCTTCAGTAAGAATAAACTATAGTCGAGGAACTAATGAAGGTCGAACACT AAGAATTGATAGCACTTTAGAGACAAAAAATTTGGACAATTTATGGCTTGAGTTTTATAGAATCAAACCAAATTTTAATC CTATAAACGTTTGTATTAGTCAAACGGAAAAAATAAATGAATTCAGTCTTATAAGTAAATGCAAAACATTTTCATATAAT CAGGCAATACAAGTTTTGACAGAAGCTAATGAAAAATCATTTGATGATTCTATCCTGTTGAATACCTCAGGTGAACTTTG TTGTGGAAGTACATTTAATCTTCTAATTAAAAGAAATAATCAATGGATAACTCCTAGAAAAAAGAGCGGCTGTTTAGAGG GGATTATGGTTTCTCAAGCTTTAAAATTGAAAATTGTAAAAGAAGAATTAATTCCTCCAAAATTTCAAAATGATGACATA ATAGTTGCAATTAATAGCTTATCTTGCAGACAAATTTATCAAGTTGATGATTTAAAGCTTAAACCTAAATTCGATCCAAT TTACTTTTGGGATTTATTATATAGTTGA
Upstream 100 bases:
>100_bases TCAATATATATGCTGGTTGCGGAATAGTTATTGACTCAGACCCGGAGGAAGAAACTGATGAACTAAAGTGGAAACTTTTA CCATTAATTGATTCACTAAA
Downstream 100 bases:
>100_bases ACTTTATTAATATCTGGTAAATAGACATCAGATACTTTAGTTATATTGTTATTAACCTTAAATTCAACAATTTTTCCAAT AATGATAATTGATGGAGCTA
Product: aminotransferases class-IV
Products: NA
Alternate protein names: Aminotransferases Class-IV; Aminotransferase; Aminotransferase Class-IV; 4-Amino-4-Deoxychorismate Lyase; Branched-Chain Amino Acid Aminotransferase; Class IV Aminotransferase; Aminodeoxychorismate Lyase
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MIETLGWHKDQWLDIDRIFIAANNRGLKFADGIFETILIKENKPILFDDHLKRLEKSSKILNINLKINKLTLRQLIHDGI KKLSLKKDQFASVRINYSRGTNEGRTLRIDSTLETKNLDNLWLEFYRIKPNFNPINVCISQTEKINEFSLISKCKTFSYN QAIQVLTEANEKSFDDSILLNTSGELCCGSTFNLLIKRNNQWITPRKKSGCLEGIMVSQALKLKIVKEELIPPKFQNDDI IVAINSLSCRQIYQVDDLKLKPKFDPIYFWDLLYS
Sequences:
>Translated_275_residues MIETLGWHKDQWLDIDRIFIAANNRGLKFADGIFETILIKENKPILFDDHLKRLEKSSKILNINLKINKLTLRQLIHDGI KKLSLKKDQFASVRINYSRGTNEGRTLRIDSTLETKNLDNLWLEFYRIKPNFNPINVCISQTEKINEFSLISKCKTFSYN QAIQVLTEANEKSFDDSILLNTSGELCCGSTFNLLIKRNNQWITPRKKSGCLEGIMVSQALKLKIVKEELIPPKFQNDDI IVAINSLSCRQIYQVDDLKLKPKFDPIYFWDLLYS >Mature_275_residues MIETLGWHKDQWLDIDRIFIAANNRGLKFADGIFETILIKENKPILFDDHLKRLEKSSKILNINLKINKLTLRQLIHDGI KKLSLKKDQFASVRINYSRGTNEGRTLRIDSTLETKNLDNLWLEFYRIKPNFNPINVCISQTEKINEFSLISKCKTFSYN QAIQVLTEANEKSFDDSILLNTSGELCCGSTFNLLIKRNNQWITPRKKSGCLEGIMVSQALKLKIVKEELIPPKFQNDDI IVAINSLSCRQIYQVDDLKLKPKFDPIYFWDLLYS
Specific function: Unknown
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31962; Mature: 31962
Theoretical pI: Translated: 9.35; Mature: 9.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIETLGWHKDQWLDIDRIFIAANNRGLKFADGIFETILIKENKPILFDDHLKRLEKSSKI CCCCCCCCCCCCEEEEEEEEEECCCCCEEHHCCEEEEEEECCCCEEEHHHHHHHHCCCCE LNINLKINKLTLRQLIHDGIKKLSLKKDQFASVRINYSRGTNEGRTLRIDSTLETKNLDN EEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCC LWLEFYRIKPNFNPINVCISQTEKINEFSLISKCKTFSYNQAIQVLTEANEKSFDDSILL EEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEE NTSGELCCGSTFNLLIKRNNQWITPRKKSGCLEGIMVSQALKLKIVKEELIPPKFQNDDI ECCCCEEECCCEEEEEEECCCEECCCCCCCHHHHHHHHHHHHEEEEHHHCCCCCCCCCCE IVAINSLSCRQIYQVDDLKLKPKFDPIYFWDLLYS EEEECCCCCEEEEEECCEEECCCCCCEEEEEECCC >Mature Secondary Structure MIETLGWHKDQWLDIDRIFIAANNRGLKFADGIFETILIKENKPILFDDHLKRLEKSSKI CCCCCCCCCCCCEEEEEEEEEECCCCCEEHHCCEEEEEEECCCCEEEHHHHHHHHCCCCE LNINLKINKLTLRQLIHDGIKKLSLKKDQFASVRINYSRGTNEGRTLRIDSTLETKNLDN EEEEEEEEHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCCCCCC LWLEFYRIKPNFNPINVCISQTEKINEFSLISKCKTFSYNQAIQVLTEANEKSFDDSILL EEEEEEEECCCCCCEEEEEECCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCEEEE NTSGELCCGSTFNLLIKRNNQWITPRKKSGCLEGIMVSQALKLKIVKEELIPPKFQNDDI ECCCCEEECCCEEEEEEECCCEECCCCCCCHHHHHHHHHHHHEEEEHHHCCCCCCCCCCE IVAINSLSCRQIYQVDDLKLKPKFDPIYFWDLLYS EEEECCCCCEEEEEECCEEECCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA