| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969329
Identifier: 123969329
GI number: 123969329
Start: 1529851
End: 1530480
Strand: Reverse
Name: 123969329
Synonym: A9601_17971
Alternate gene names: NA
Gene position: 1530480-1529851 (Counterclockwise)
Preceding gene: 123969330
Following gene: 123969328
Centisome position: 91.65
GC content: 37.94
Gene sequence:
>630_bases ATGCCCTTTGCAAATAATCAAAGAATTACACGTAGACGTAGTTCAGCTGGCCCTACACCTCCCAAAAGACCATTAGGTAA TAATTCTGAATCAATGAGTAGACAGGCTCAGGGTCCAAGACCAACTTTTTTGACGCTAAGGGATCATGGGAAAGTTTTTG TTGCTGATTTACCTAATTTGTCGGATGGTCAATTAGCGCATATTAGTAAAGAAGCTAATGAAGTTTTAAATAGTTTGGAA AAAAGACTTAGCGATCTTGAAAATGAGCCTAATGTTAGTAATCCTGAAAACGATACGCTGATAAAAGCATCTACCAAAAG AGATGTCACACTGAGGTTTATTAAATCAATTGAGGAAGAACAAGAACATAGAAAAAATAATCCTGCTTTACGAGATGCTG CATCCGAATCGCTACCGAGAACTTTTCTTGAGGTTGCTAGACATAGATTGCCAGGTGCAACTTTTGATTCACTACTTCGA GAGGCTCTTGAAGCTTGTGCAGTTGATGAGAGTACTGAAGAAAATCAAGTTATTGATGAGCCTAAAGAAACTGTAAAAAT CATGGATATACCCTCTTCCAACACAAATGCTTCACTTGTTGTTAGTATCGACTCAAGTGATGATACCTAG
Upstream 100 bases:
>100_bases ATTATTTTTTATACCCAAATGAAAAAGTTAGGTGTAATATAATAAAATTACCGCCGAATTATATCGGAAGTTTAAGTATT AAGATTTAACCTTTTATTCA
Downstream 100 bases:
>100_bases AATGGCTCTATTTGATTCAACACAAGATTTAATAAGTTTTAAGAATATAAATATTTCAAAGATTAACCCTTCTTCAGAGA AAGATCCTATTTTATGTAAT
Product: carboxylase domain-containing protein
Products: NA
Alternate protein names: Hpt Domain-Containing Protein
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MPFANNQRITRRRSSAGPTPPKRPLGNNSESMSRQAQGPRPTFLTLRDHGKVFVADLPNLSDGQLAHISKEANEVLNSLE KRLSDLENEPNVSNPENDTLIKASTKRDVTLRFIKSIEEEQEHRKNNPALRDAASESLPRTFLEVARHRLPGATFDSLLR EALEACAVDESTEENQVIDEPKETVKIMDIPSSNTNASLVVSIDSSDDT
Sequences:
>Translated_209_residues MPFANNQRITRRRSSAGPTPPKRPLGNNSESMSRQAQGPRPTFLTLRDHGKVFVADLPNLSDGQLAHISKEANEVLNSLE KRLSDLENEPNVSNPENDTLIKASTKRDVTLRFIKSIEEEQEHRKNNPALRDAASESLPRTFLEVARHRLPGATFDSLLR EALEACAVDESTEENQVIDEPKETVKIMDIPSSNTNASLVVSIDSSDDT >Mature_208_residues PFANNQRITRRRSSAGPTPPKRPLGNNSESMSRQAQGPRPTFLTLRDHGKVFVADLPNLSDGQLAHISKEANEVLNSLEK RLSDLENEPNVSNPENDTLIKASTKRDVTLRFIKSIEEEQEHRKNNPALRDAASESLPRTFLEVARHRLPGATFDSLLRE ALEACAVDESTEENQVIDEPKETVKIMDIPSSNTNASLVVSIDSSDDT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23210; Mature: 23079
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFANNQRITRRRSSAGPTPPKRPLGNNSESMSRQAQGPRPTFLTLRDHGKVFVADLPNL CCCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCEEEEECCCC SDGQLAHISKEANEVLNSLEKRLSDLENEPNVSNPENDTLIKASTKRDVTLRFIKSIEEE CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHH QEHRKNNPALRDAASESLPRTFLEVARHRLPGATFDSLLREALEACAVDESTEENQVIDE HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC PKETVKIMDIPSSNTNASLVVSIDSSDDT HHHEEEEEECCCCCCCCEEEEEECCCCCC >Mature Secondary Structure PFANNQRITRRRSSAGPTPPKRPLGNNSESMSRQAQGPRPTFLTLRDHGKVFVADLPNL CCCCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCEEEEECCCC SDGQLAHISKEANEVLNSLEKRLSDLENEPNVSNPENDTLIKASTKRDVTLRFIKSIEEE CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHH QEHRKNNPALRDAASESLPRTFLEVARHRLPGATFDSLLREALEACAVDESTEENQVIDE HHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC PKETVKIMDIPSSNTNASLVVSIDSSDDT HHHEEEEEECCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA