| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123969328
Identifier: 123969328
GI number: 123969328
Start: 1529682
End: 1529849
Strand: Reverse
Name: 123969328
Synonym: A9601_17961
Alternate gene names: NA
Gene position: 1529849-1529682 (Counterclockwise)
Preceding gene: 123969329
Following gene: 123969327
Centisome position: 91.61
GC content: 29.17
Gene sequence:
>168_bases ATGGCTCTATTTGATTCAACACAAGATTTAATAAGTTTTAAGAATATAAATATTTCAAAGATTAACCCTTCTTCAGAGAA AGATCCTATTTTATGTAATCATTGCAAAAGGACTGCATCAAATGGTGTTAGATGTTTAGGGATGTGTGTAGCAGATAATG ATTACTAA
Upstream 100 bases:
>100_bases ATTGATGAGCCTAAAGAAACTGTAAAAATCATGGATATACCCTCTTCCAACACAAATGCTTCACTTGTTGTTAGTATCGA CTCAAGTGATGATACCTAGA
Downstream 100 bases:
>100_bases AATAGTTCAAATTTTTATATAAATAATTGAAACTTTTTACCGTCTATTTAAGATTGAGTATTTTCGAAAATTTCATTATT AAATGTGAAAAAAATTAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 55; Mature: 54
Protein sequence:
>55_residues MALFDSTQDLISFKNINISKINPSSEKDPILCNHCKRTASNGVRCLGMCVADNDY
Sequences:
>Translated_55_residues MALFDSTQDLISFKNINISKINPSSEKDPILCNHCKRTASNGVRCLGMCVADNDY >Mature_54_residues ALFDSTQDLISFKNINISKINPSSEKDPILCNHCKRTASNGVRCLGMCVADNDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 6093; Mature: 5962
Theoretical pI: Translated: 7.13; Mature: 7.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
7.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 10.9 %Cys+Met (Translated Protein) 7.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 9.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALFDSTQDLISFKNINISKINPSSEKDPILCNHCKRTASNGVRCLGMCVADNDY CCCCCCCCHHHEECCCCEEEECCCCCCCCEEHHHHHHCCCCCCEEEEEEEECCCC >Mature Secondary Structure ALFDSTQDLISFKNINISKINPSSEKDPILCNHCKRTASNGVRCLGMCVADNDY CCCCCCCHHHEECCCCEEEECCCCCCCCEEHHHHHHCCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA