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The map label for this gene is yibD [C]

Identifier: 123968958

GI number: 123968958

Start: 1198284

End: 1198940

Strand: Reverse

Name: yibD [C]

Synonym: A9601_14251

Alternate gene names: 123968958

Gene position: 1198940-1198284 (Counterclockwise)

Preceding gene: 123968959

Following gene: 123968957

Centisome position: 71.8

GC content: 27.7

Gene sequence:

>657_bases
ATGAATAATCCAATTGTTTCTGTAATAATTCCATGCTTAAACGCAGAGAAATTTATTTCTAGAGCATTAAGATCAATTTT
GCATCAATCTTTAAATAGAGAAAAATATGAAATAATTGTAATTAACGATGGTTCAACCGATAATTCAGATTATCTAATAA
AACAGTTTAAGGAGGATATAAGGTATTTTACTAATGATAAAAATATGGGGTTGCCTAATACATTAAATAGAGGAATTTTG
GAAGCAAAAGGTAAATATATTTGTAGATTAGATGCAGATGATTTTGTGAATCAGTATTATTTGTTATTTCTGCTCGAATA
TTTAGTTCAACATCCAGAAGCAAAAGTTTGTAAGTGTGACTATTACTTAGTAGATGAAAATGGAGAGAACCGAATATATA
CTTCATCTTTAGAGAATCCGATTGGATGTGGGACAATTTTTGAATTAGATTTATTGTCAAAAGTTGGTGGATACAATAAG
AAATATTTATGTAATGAAGAAAAAGAATTATTTATAAGAATTGAACGTCTAACTAAAGTGCATCATTTGCCAATGCCACT
TTATCGATATAGAAAACATCCCGAAAGCCTAACAACTAATGATTTAGTTATGACTAAGTATGATCAAATTTTAGAAAAAG
ATTATCCACAAAATTGA

Upstream 100 bases:

>100_bases
TTTTAAATATTAAAAATCAAAAATGATTATTTGTTTCTTATTATAAATTGGCAATACTTAATAAATGTTACTATTAACTT
TATTAGTTTAAATTCATAGG

Downstream 100 bases:

>100_bases
TATGTTAAAAAATCAAAATTTTGATAGTTATTCACGAATATTTAACAGGAAATTAGAAGAAGGAATAATTATTGCAGAAA
TAGGAGTTAATCATGGAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 218; Mature: 218

Protein sequence:

>218_residues
MNNPIVSVIIPCLNAEKFISRALRSILHQSLNREKYEIIVINDGSTDNSDYLIKQFKEDIRYFTNDKNMGLPNTLNRGIL
EAKGKYICRLDADDFVNQYYLLFLLEYLVQHPEAKVCKCDYYLVDENGENRIYTSSLENPIGCGTIFELDLLSKVGGYNK
KYLCNEEKELFIRIERLTKVHHLPMPLYRYRKHPESLTTNDLVMTKYDQILEKDYPQN

Sequences:

>Translated_218_residues
MNNPIVSVIIPCLNAEKFISRALRSILHQSLNREKYEIIVINDGSTDNSDYLIKQFKEDIRYFTNDKNMGLPNTLNRGIL
EAKGKYICRLDADDFVNQYYLLFLLEYLVQHPEAKVCKCDYYLVDENGENRIYTSSLENPIGCGTIFELDLLSKVGGYNK
KYLCNEEKELFIRIERLTKVHHLPMPLYRYRKHPESLTTNDLVMTKYDQILEKDYPQN
>Mature_218_residues
MNNPIVSVIIPCLNAEKFISRALRSILHQSLNREKYEIIVINDGSTDNSDYLIKQFKEDIRYFTNDKNMGLPNTLNRGIL
EAKGKYICRLDADDFVNQYYLLFLLEYLVQHPEAKVCKCDYYLVDENGENRIYTSSLENPIGCGTIFELDLLSKVGGYNK
KYLCNEEKELFIRIERLTKVHHLPMPLYRYRKHPESLTTNDLVMTKYDQILEKDYPQN

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 25622; Mature: 25622

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNPIVSVIIPCLNAEKFISRALRSILHQSLNREKYEIIVINDGSTDNSDYLIKQFKEDI
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
RYFTNDKNMGLPNTLNRGILEAKGKYICRLDADDFVNQYYLLFLLEYLVQHPEAKVCKCD
HHHCCCCCCCCCCHHHCCHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
YYLVDENGENRIYTSSLENPIGCGTIFELDLLSKVGGYNKKYLCNEEKELFIRIERLTKV
EEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
HHLPMPLYRYRKHPESLTTNDLVMTKYDQILEKDYPQN
HCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNNPIVSVIIPCLNAEKFISRALRSILHQSLNREKYEIIVINDGSTDNSDYLIKQFKEDI
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHH
RYFTNDKNMGLPNTLNRGILEAKGKYICRLDADDFVNQYYLLFLLEYLVQHPEAKVCKCD
HHHCCCCCCCCCCHHHCCHHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
YYLVDENGENRIYTSSLENPIGCGTIFELDLLSKVGGYNKKYLCNEEKELFIRIERLTKV
EEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
HHLPMPLYRYRKHPESLTTNDLVMTKYDQILEKDYPQN
HCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]