| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968956
Identifier: 123968956
GI number: 123968956
Start: 1196293
End: 1197144
Strand: Reverse
Name: 123968956
Synonym: A9601_14231
Alternate gene names: NA
Gene position: 1197144-1196293 (Counterclockwise)
Preceding gene: 123968957
Following gene: 123968955
Centisome position: 71.69
GC content: 25.7
Gene sequence:
>852_bases ATGTGGTTAATAAAAATATTTTTAAAAATTATTTTTTCACGAATACCCATTAAAAAAAGTATTTGGAAAAAAATTGGTGT TTTTAGAAATGGAGGAATGAATAGGGCAGAATATTCTAAAAAGATATTCTTCGGACATTTGGAAGGCTTAAGAGCTATTA AAAAGATTGAAGAACCTACAATTATCGAGTTAGGACCAGGAGATGGTTTGGCGTCTGCTATTTATTCTAAGATTTATAAC TCTCCAAAAGTTTTCTTAATAGATATAGAGGAATGTGCCGATTATGATATTTCTGTTTATAAAAAAATTATAAACTCTTT AGATAATAATTTGCTTACTAAATTAGATATCCAAAATTTAAGAAATATAAATGAATTATTAAATACTTTTAATGCCTCTT ATTTAACTGATGGATTAAATAGTCTAAAAAAAATAAGTTCAGATTCAATAGACTATTTATTCTCGCATTCAGTTTTGGAG CATATAAGATTAAATGATATTGATGAATATATTTTTGAAATGTATAGAGTTTTAAAGCCGGGAGGATTGATTTCTCATAA TATTAATTATAAAGACCATCTAGATGAATCTCTAAATAACTTAAGATTTTCTGAAAACATATGGGAGTCAAGTTTTTTTG CATCTAGTGGTTTTTATACAAATAGAATCCCAGCAATTGAGATGCATAAGAAATTTTCTAATCAGGGTTTCAATATTATT TGGGAGAAATATGGTAATTGGCAAAAGTTGCCTTTAAAAAGAAAGTATCTTAATAAAAAATTTAGAAAATATTCTGATGA AGATTTGAAAAAATGTACTTCAGCTTTTATTGCTTGCTTAGAAAATAAATAG
Upstream 100 bases:
>100_bases TCTCCTATTAATTGGGAGGATTTAGAAATTTGAAAAATTAATATTTTAATATTGTTAAATGATTTTTTTATTTTCCCAGA ATTTAGAAGTAAAATAGTTT
Downstream 100 bases:
>100_bases AATAGATTTATATAAGTATAAATTTTAAAATGTTAAAAATTAATATAATTAAATCTAATTAATAAGCTTCTGTAAAATTT AAATTTGTTTATTAAATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MWLIKIFLKIIFSRIPIKKSIWKKIGVFRNGGMNRAEYSKKIFFGHLEGLRAIKKIEEPTIIELGPGDGLASAIYSKIYN SPKVFLIDIEECADYDISVYKKIINSLDNNLLTKLDIQNLRNINELLNTFNASYLTDGLNSLKKISSDSIDYLFSHSVLE HIRLNDIDEYIFEMYRVLKPGGLISHNINYKDHLDESLNNLRFSENIWESSFFASSGFYTNRIPAIEMHKKFSNQGFNII WEKYGNWQKLPLKRKYLNKKFRKYSDEDLKKCTSAFIACLENK
Sequences:
>Translated_283_residues MWLIKIFLKIIFSRIPIKKSIWKKIGVFRNGGMNRAEYSKKIFFGHLEGLRAIKKIEEPTIIELGPGDGLASAIYSKIYN SPKVFLIDIEECADYDISVYKKIINSLDNNLLTKLDIQNLRNINELLNTFNASYLTDGLNSLKKISSDSIDYLFSHSVLE HIRLNDIDEYIFEMYRVLKPGGLISHNINYKDHLDESLNNLRFSENIWESSFFASSGFYTNRIPAIEMHKKFSNQGFNII WEKYGNWQKLPLKRKYLNKKFRKYSDEDLKKCTSAFIACLENK >Mature_283_residues MWLIKIFLKIIFSRIPIKKSIWKKIGVFRNGGMNRAEYSKKIFFGHLEGLRAIKKIEEPTIIELGPGDGLASAIYSKIYN SPKVFLIDIEECADYDISVYKKIINSLDNNLLTKLDIQNLRNINELLNTFNASYLTDGLNSLKKISSDSIDYLFSHSVLE HIRLNDIDEYIFEMYRVLKPGGLISHNINYKDHLDESLNNLRFSENIWESSFFASSGFYTNRIPAIEMHKKFSNQGFNII WEKYGNWQKLPLKRKYLNKKFRKYSDEDLKKCTSAFIACLENK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33082; Mature: 33082
Theoretical pI: Translated: 9.61; Mature: 9.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLIKIFLKIIFSRIPIKKSIWKKIGVFRNGGMNRAEYSKKIFFGHLEGLRAIKKIEEPT CHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC IIELGPGDGLASAIYSKIYNSPKVFLIDIEECADYDISVYKKIINSLDNNLLTKLDIQNL EEEECCCCHHHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RNINELLNTFNASYLTDGLNSLKKISSDSIDYLFSHSVLEHIRLNDIDEYIFEMYRVLKP HHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC GGLISHNINYKDHLDESLNNLRFSENIWESSFFASSGFYTNRIPAIEMHKKFSNQGFNII CCCEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEE WEKYGNWQKLPLKRKYLNKKFRKYSDEDLKKCTSAFIACLENK HHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MWLIKIFLKIIFSRIPIKKSIWKKIGVFRNGGMNRAEYSKKIFFGHLEGLRAIKKIEEPT CHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC IIELGPGDGLASAIYSKIYNSPKVFLIDIEECADYDISVYKKIINSLDNNLLTKLDIQNL EEEECCCCHHHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH RNINELLNTFNASYLTDGLNSLKKISSDSIDYLFSHSVLEHIRLNDIDEYIFEMYRVLKP HHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC GGLISHNINYKDHLDESLNNLRFSENIWESSFFASSGFYTNRIPAIEMHKKFSNQGFNII CCCEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCEEE WEKYGNWQKLPLKRKYLNKKFRKYSDEDLKKCTSAFIACLENK HHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA