| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968955
Identifier: 123968955
GI number: 123968955
Start: 1195211
End: 1196134
Strand: Reverse
Name: 123968955
Synonym: A9601_14221
Alternate gene names: NA
Gene position: 1196134-1195211 (Counterclockwise)
Preceding gene: 123968956
Following gene: 123968950
Centisome position: 71.63
GC content: 25.65
Gene sequence:
>924_bases ATGCAAAAAGAATTGTTAGTAACTGGATCATCAGGATTTTTTGGAAGTGCATTAATAAATAGAGCCCTAAAAAGGGGATG GTTTGTTAAGGGCACAGCAAGACATTCTTTAGGAATTCTCTCTGAACAATTTGGTGTTGATATCAATTATTTAGATTTAT CAAAAGATACAATTTCAATACCAAAAGCTAATTATATAGTTCATTGCGCAACTGCTAATGAAATTAAGTCTTTAGATTTA TTTAAATCTATCGATTCAACTATAAAAGGCACAAAAAAATTAATTGAATATTGTTTAGAAAATCGATTTGAGCATTTTAT TTATATTTCGACTGTTGGAATTTATGGAAGAGAACTTAATGGAGAAATTAATGAAAATTCTCCTTTTCAAGCAAATTCTA ATTATGCTTTAAATCATTATTATGCAGAAAAAATTTGTGAAAGATATGCCTCAAGAAATTTTAAAGTGACAATAATAAGA TTATCCAATGTTTATGGAATTCCTTCTGTTAGCACTGTAGATAGAAATACATTGGTACCTATATGCTTTGTAGTTAATTT ATTAAGAAAAGGTGTTGTAGAATTAAATTCTTCTGGACTTCAGCAAAGGGATTTTATTAATCAAATTGAAGCATCAGATA TAGTATTAAATTCCTTAAATAATCAGAAAAGTAATTTCGATATAATTAATGCTTCAAGCGGAAAAAGTTATTCAATTATC GAAATTGCAAAAATTGCATGTCAAGAATATTCTAAATTTTCAGGAAAAGTTGGAAAAATAACTTCAATGCCTGATAAAAA TAATTATGAAAATAACTATAGTTTTTCTAGTAAGGCTTATAAAAGTAAAGACAAAAATTTAGAATATCTTTCAATAAATG AAACTATTTCAGAGTTATTTAAAATTTATAATGCATTAATTTAA
Upstream 100 bases:
>100_bases TTAATAAGCTTCTGTAAAATTTAAATTTGTTTATTAAATTTATCTTCTTATTTTTTTTATAATAAATAAACCAGTTTATA AAAATCTTAAGTTTTTCAAA
Downstream 100 bases:
>100_bases AATATTTTTTATTAATTTATAGTTAAAACTTTTTCCCAAATTTCATCAATTTCTAAATTATATTTAATTGAATTAAAATA TATTTTATTTTTTTCATTAG
Product: hypothetical protein
Products: UDPgalactose
Alternate protein names: UDP-Glucose 4-Epimerase; Nucleoside-Diphosphate-Sugar Epimerase; DTDP-Glucose 4 6-Dehydratase; Dehydratase; UDP-Glucose-4-Epimerase; DegT/DnrJ/EryC1/StrS Aminotransferase; Glucose Galactose Epimerase; NAD Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase
Number of amino acids: Translated: 307; Mature: 307
Protein sequence:
>307_residues MQKELLVTGSSGFFGSALINRALKRGWFVKGTARHSLGILSEQFGVDINYLDLSKDTISIPKANYIVHCATANEIKSLDL FKSIDSTIKGTKKLIEYCLENRFEHFIYISTVGIYGRELNGEINENSPFQANSNYALNHYYAEKICERYASRNFKVTIIR LSNVYGIPSVSTVDRNTLVPICFVVNLLRKGVVELNSSGLQQRDFINQIEASDIVLNSLNNQKSNFDIINASSGKSYSII EIAKIACQEYSKFSGKVGKITSMPDKNNYENNYSFSSKAYKSKDKNLEYLSINETISELFKIYNALI
Sequences:
>Translated_307_residues MQKELLVTGSSGFFGSALINRALKRGWFVKGTARHSLGILSEQFGVDINYLDLSKDTISIPKANYIVHCATANEIKSLDL FKSIDSTIKGTKKLIEYCLENRFEHFIYISTVGIYGRELNGEINENSPFQANSNYALNHYYAEKICERYASRNFKVTIIR LSNVYGIPSVSTVDRNTLVPICFVVNLLRKGVVELNSSGLQQRDFINQIEASDIVLNSLNNQKSNFDIINASSGKSYSII EIAKIACQEYSKFSGKVGKITSMPDKNNYENNYSFSSKAYKSKDKNLEYLSINETISELFKIYNALI >Mature_307_residues MQKELLVTGSSGFFGSALINRALKRGWFVKGTARHSLGILSEQFGVDINYLDLSKDTISIPKANYIVHCATANEIKSLDL FKSIDSTIKGTKKLIEYCLENRFEHFIYISTVGIYGRELNGEINENSPFQANSNYALNHYYAEKICERYASRNFKVTIIR LSNVYGIPSVSTVDRNTLVPICFVVNLLRKGVVELNSSGLQQRDFINQIEASDIVLNSLNNQKSNFDIINASSGKSYSII EIAKIACQEYSKFSGKVGKITSMPDKNNYENNYSFSSKAYKSKDKNLEYLSINETISELFKIYNALI
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI7657641, Length=187, Percent_Identity=29.4117647058824, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 5.1.3.2
Molecular weight: Translated: 34605; Mature: 34605
Theoretical pI: Translated: 8.98; Mature: 8.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKELLVTGSSGFFGSALINRALKRGWFVKGTARHSLGILSEQFGVDINYLDLSKDTISI CCCCEEEECCCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCEEEEEECCCCEECC PKANYIVHCATANEIKSLDLFKSIDSTIKGTKKLIEYCLENRFEHFIYISTVGIYGRELN CCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCC GEINENSPFQANSNYALNHYYAEKICERYASRNFKVTIIRLSNVYGIPSVSTVDRNTLVP CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCHHH ICFVVNLLRKGVVELNSSGLQQRDFINQIEASDIVLNSLNNQKSNFDIINASSGKSYSII HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEHH EIAKIACQEYSKFSGKVGKITSMPDKNNYENNYSFSSKAYKSKDKNLEYLSINETISELF HHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHCCCCCCEEEEHHHHHHHHH KIYNALI HHHHHCC >Mature Secondary Structure MQKELLVTGSSGFFGSALINRALKRGWFVKGTARHSLGILSEQFGVDINYLDLSKDTISI CCCCEEEECCCCCHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHCCEEEEEECCCCEECC PKANYIVHCATANEIKSLDLFKSIDSTIKGTKKLIEYCLENRFEHFIYISTVGIYGRELN CCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCCCC GEINENSPFQANSNYALNHYYAEKICERYASRNFKVTIIRLSNVYGIPSVSTVDRNTLVP CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCHHH ICFVVNLLRKGVVELNSSGLQQRDFINQIEASDIVLNSLNNQKSNFDIINASSGKSYSII HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCEEHH EIAKIACQEYSKFSGKVGKITSMPDKNNYENNYSFSSKAYKSKDKNLEYLSINETISELF HHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHCCCCCCEEEEHHHHHHHHH KIYNALI HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: UDP-glucose
Specific reaction: UDP-glucose = UDP-galactose
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA