| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123968898
Identifier: 123968898
GI number: 123968898
Start: 1135864
End: 1136592
Strand: Direct
Name: 123968898
Synonym: A9601_13651
Alternate gene names: NA
Gene position: 1135864-1136592 (Clockwise)
Preceding gene: 123968894
Following gene: 123968899
Centisome position: 68.02
GC content: 26.75
Gene sequence:
>729_bases GTGACTGATAAATTTCAAAATGATATTAAAAATCTTGTTGAAGAATTTAACTTTAATGGGCAGAAAAAGTTCAAATTAAT CGTATTATTTGGTTTATTGGGAGATTTTGATAGCTTTGAATATGCAATAAACTTAAAAAATTTTATTAAGAATCAAGATA ACAATTTAGACGTTTTTGCCATTGCTATTGGCAACCAAAATGGGAAACAAAAATTCTGTCAATTTACTGGCTTTCCCAAA GAGAATTTAATAGTTGTTTCTGATAATCAAATCCACAATAAATTAAAAGTCTCAAGAGGATTAGATATTGGTTTCGGAGG TTGGATAAATATGCTTTTGATGCTATCAGGGATAAATTCTTTTAAAACAATTAGAGAGGTTATTAGAGGTTATGTCGGCG ACCGCAAAGCAAAGCAAATCTATTCAGAATATGACAAAATCGATGTATTAAAATTTATAAAATTTTCAGGTAATTCTTTT AAAAAGGTTTTCGGAAAAGGTTATTTAAGACCATTTGAATTAGCAACATTTAGATTAAATAATATGAATGAAATAATCCA AAATTGGAGTGATTATATTCTTAATGAAGAATATCTTCCACAAAGGGGAGCTTCCTTTTTATTAAATGATCAAAATCAAG TTGTTTATAAATTTTTTTCAAGTTATGTTCTTGGATATTCATCAAACATGAGAGATCCTTTAGGATTTTTATCTGATTTA ATTAAATAA
Upstream 100 bases:
>100_bases CGTTAAATTAATTTCTTTAAAAACTTTTTCATGTAAAATTTTATACTAATTAAGGTAAGAAAATTTTTTTGAGAATAATT TACAAAACATTTCAACCATC
Downstream 100 bases:
>100_bases TTTCTAAAAATTTTATGAATGTAGATATATTCGGATACCTTGCAGCGATTTTAACAACCGCGGCATTCCTACCTCAATTG ATAAAAACTTTAAAAACAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 242; Mature: 241
Protein sequence:
>242_residues MTDKFQNDIKNLVEEFNFNGQKKFKLIVLFGLLGDFDSFEYAINLKNFIKNQDNNLDVFAIAIGNQNGKQKFCQFTGFPK ENLIVVSDNQIHNKLKVSRGLDIGFGGWINMLLMLSGINSFKTIREVIRGYVGDRKAKQIYSEYDKIDVLKFIKFSGNSF KKVFGKGYLRPFELATFRLNNMNEIIQNWSDYILNEEYLPQRGASFLLNDQNQVVYKFFSSYVLGYSSNMRDPLGFLSDL IK
Sequences:
>Translated_242_residues MTDKFQNDIKNLVEEFNFNGQKKFKLIVLFGLLGDFDSFEYAINLKNFIKNQDNNLDVFAIAIGNQNGKQKFCQFTGFPK ENLIVVSDNQIHNKLKVSRGLDIGFGGWINMLLMLSGINSFKTIREVIRGYVGDRKAKQIYSEYDKIDVLKFIKFSGNSF KKVFGKGYLRPFELATFRLNNMNEIIQNWSDYILNEEYLPQRGASFLLNDQNQVVYKFFSSYVLGYSSNMRDPLGFLSDL IK >Mature_241_residues TDKFQNDIKNLVEEFNFNGQKKFKLIVLFGLLGDFDSFEYAINLKNFIKNQDNNLDVFAIAIGNQNGKQKFCQFTGFPKE NLIVVSDNQIHNKLKVSRGLDIGFGGWINMLLMLSGINSFKTIREVIRGYVGDRKAKQIYSEYDKIDVLKFIKFSGNSFK KVFGKGYLRPFELATFRLNNMNEIIQNWSDYILNEEYLPQRGASFLLNDQNQVVYKFFSSYVLGYSSNMRDPLGFLSDLI K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28047; Mature: 27915
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDKFQNDIKNLVEEFNFNGQKKFKLIVLFGLLGDFDSFEYAINLKNFIKNQDNNLDVFA CCCHHHHHHHHHHHHHCCCCCHHEEEEEEEHHHCCCCCHHHEEEHHHHHCCCCCCEEEEE IAIGNQNGKQKFCQFTGFPKENLIVVSDNQIHNKLKVSRGLDIGFGGWINMLLMLSGINS EEECCCCCHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCH FKTIREVIRGYVGDRKAKQIYSEYDKIDVLKFIKFSGNSFKKVFGKGYLRPFELATFRLN HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHEEEC NMNEIIQNWSDYILNEEYLPQRGASFLLNDQNQVVYKFFSSYVLGYSSNMRDPLGFLSDL CHHHHHHHHHHHHCCCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IK CC >Mature Secondary Structure TDKFQNDIKNLVEEFNFNGQKKFKLIVLFGLLGDFDSFEYAINLKNFIKNQDNNLDVFA CCHHHHHHHHHHHHHCCCCCHHEEEEEEEHHHCCCCCHHHEEEHHHHHCCCCCCEEEEE IAIGNQNGKQKFCQFTGFPKENLIVVSDNQIHNKLKVSRGLDIGFGGWINMLLMLSGINS EEECCCCCHHHHHHHCCCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCH FKTIREVIRGYVGDRKAKQIYSEYDKIDVLKFIKFSGNSFKKVFGKGYLRPFELATFRLN HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHEEEC NMNEIIQNWSDYILNEEYLPQRGASFLLNDQNQVVYKFFSSYVLGYSSNMRDPLGFLSDL CHHHHHHHHHHHHCCCHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHH IK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA