Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

Click here to switch to the map view.

The map label for this gene is 123968899

Identifier: 123968899

GI number: 123968899

Start: 1136607

End: 1136864

Strand: Direct

Name: 123968899

Synonym: A9601_13661

Alternate gene names: NA

Gene position: 1136607-1136864 (Clockwise)

Preceding gene: 123968898

Following gene: 123968900

Centisome position: 68.06

GC content: 27.13

Gene sequence:

>258_bases
ATGAATGTAGATATATTCGGATACCTTGCAGCGATTTTAACAACCGCGGCATTCCTACCTCAATTGATAAAAACTTTAAA
AACAAAAAAGGCAGATGATGTTTCTTTGACAACATTAGTAATGTTTATTATCGGTGTTTTGTCTTGGATTATTTACGGTT
ATAAAATTTCTTCTACACCAATATTGATAGCGAATTTAATTACCCTAATCTTAAATCTTTTGATATTAATATCTAAAATA
TATTTTTCAAAAAACTAA

Upstream 100 bases:

>100_bases
TTTATAAATTTTTTTCAAGTTATGTTCTTGGATATTCATCAAACATGAGAGATCCTTTAGGATTTTTATCTGATTTAATT
AAATAATTTCTAAAAATTTT

Downstream 100 bases:

>100_bases
AATGAATAAAATATTTTTTTATAAAGTAATAAATTTTTAATTTATTACTAAACATTGATTAATATAGAACAAAAATTTTC
TGATCTTGAAAACTGCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 85; Mature: 85

Protein sequence:

>85_residues
MNVDIFGYLAAILTTAAFLPQLIKTLKTKKADDVSLTTLVMFIIGVLSWIIYGYKISSTPILIANLITLILNLLILISKI
YFSKN

Sequences:

>Translated_85_residues
MNVDIFGYLAAILTTAAFLPQLIKTLKTKKADDVSLTTLVMFIIGVLSWIIYGYKISSTPILIANLITLILNLLILISKI
YFSKN
>Mature_85_residues
MNVDIFGYLAAILTTAAFLPQLIKTLKTKKADDVSLTTLVMFIIGVLSWIIYGYKISSTPILIANLITLILNLLILISKI
YFSKN

Specific function: Unknown

COG id: COG4095

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9450; Mature: 9450

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVDIFGYLAAILTTAAFLPQLIKTLKTKKADDVSLTTLVMFIIGVLSWIIYGYKISSTP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
ILIANLITLILNLLILISKIYFSKN
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNVDIFGYLAAILTTAAFLPQLIKTLKTKKADDVSLTTLVMFIIGVLSWIIYGYKISSTP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCH
ILIANLITLILNLLILISKIYFSKN
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA