| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123968894
Identifier: 123968894
GI number: 123968894
Start: 1133016
End: 1133261
Strand: Direct
Name: 123968894
Synonym: A9601_13611
Alternate gene names: NA
Gene position: 1133016-1133261 (Clockwise)
Preceding gene: 123968893
Following gene: 123968898
Centisome position: 67.85
GC content: 31.71
Gene sequence:
>246_bases ATGGGTTCTAAAAGAGAAAAATATCCTGAAAGATGCCCTTGGGATCTAGGACCTAATCAACATTTAGCCAAAGAAGAGAA CTGGACTTTAAGGTTAGGAGAGGCAAATGTATGCTTTAGCAAAAATAAATTAGATAATAATTATTTTCATGTTATCAGTA ATGAAAATGAGGAACAAATTCTAGCTTTTAGAGCAAGACTCTTATATCAAAAACTACTTGATAAAGGGTTTAGACTGGTT GAATAA
Upstream 100 bases:
>100_bases GATTGCACCAAGCAAAAATTTAATGAAAAAGTTATCAAATTTTTTTTCATAGCCATACTTTTAAATTTTGACTAATATTG GATAGTTTAAAATTTATCAA
Downstream 100 bases:
>100_bases AAAAACCTATCTTAATAAGCATAGATCCTCGAAAACAAACTTTTGTGTTTCTTCCTCTTGATTTTGGTTTGTGTATTTTA TTATCCTCGAACTTAATATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MGSKREKYPERCPWDLGPNQHLAKEENWTLRLGEANVCFSKNKLDNNYFHVISNENEEQILAFRARLLYQKLLDKGFRLV E
Sequences:
>Translated_81_residues MGSKREKYPERCPWDLGPNQHLAKEENWTLRLGEANVCFSKNKLDNNYFHVISNENEEQILAFRARLLYQKLLDKGFRLV E >Mature_80_residues GSKREKYPERCPWDLGPNQHLAKEENWTLRLGEANVCFSKNKLDNNYFHVISNENEEQILAFRARLLYQKLLDKGFRLVE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9654; Mature: 9523
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSKREKYPERCPWDLGPNQHLAKEENWTLRLGEANVCFSKNKLDNNYFHVISNENEEQI CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCCEEEEECCCCHHHH LAFRARLLYQKLLDKGFRLVE HHHHHHHHHHHHHHCCCEECC >Mature Secondary Structure GSKREKYPERCPWDLGPNQHLAKEENWTLRLGEANVCFSKNKLDNNYFHVISNENEEQI CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCEEECCCCCCCCEEEEECCCCHHHH LAFRARLLYQKLLDKGFRLVE HHHHHHHHHHHHHHCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA