| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is cdsA [H]
Identifier: 123968724
GI number: 123968724
Start: 1006682
End: 1007539
Strand: Direct
Name: cdsA [H]
Synonym: A9601_11911
Alternate gene names: 123968724
Gene position: 1006682-1007539 (Clockwise)
Preceding gene: 123968723
Following gene: 123968729
Centisome position: 60.28
GC content: 30.89
Gene sequence:
>858_bases ATGAGATTAAGAAGCGGTCTACTTATAGGAATTTTTGGTTTAATTGTTGTTTTGATGGGGGGATGGTTTTTTACATTGGC AACTGCGATGCTTACATATCTAGCATTATTGGAATTTTTTAGAATGGCAGAATTTAAAGGAATAAGACCAGCTACAAAAA CCACATTATTTTCATCCTTTATAATTATAGTTTCTACTTATCTTGAGACTATAGGTTTGATTGAAGGAGAAATTTCAAAT TCAATTTTGCCAATCTGTTCAGTTGGGATATGTACTTGGTTACTTTTGCAGCCAAAACCTGGGACAATTTCAGATATTGC AGCCTCTATTTTTGGATTATTCTATTTAGGTTTTTTACCTAGTTACTGGATTAAGTTAAGGGGATTAGATTCAGTGATAA TCAGTTCAAATCAAGGGTTTATATCGTTTGAGAACTTATCAAATACTACAGGTCTGCATTTAACTTTAACTTCTTGCTTT TTAATTGTAGCTAGTGATATTGGTTCTTATTTCATTGGGAAGTCATTTGGTAAAAAATCTCTATCTCCAATATCTCCTAG CAAAACTATAGAAGGTTTAATTGGAGGAATATCCTGTTCAACTTTACTAGCAATATTTTTCGCATTTTTATTGAATTGGG AAAATCCATTATTTGTTGGAATAATATATGGAATTTCAATTTCTCTTATGGCATTGGTTGGAGATTTAATTGAATCTATG ATGAAGAGAGATGCAAAAATAAAAGATTCCGGAACTTTTTTACCGGGACATGGAGGGATTCTTGACAGAATTGACAGTTA CATCTTTACTCCATCTGTTTTGTATTATATTTTTATAATTCTCAAGTATTTAAATTAA
Upstream 100 bases:
>100_bases AATTGATTTAGATAGGTTTAATTGGATAAATAATCAAAGTTTATGCAACAAGGATCTGGTAAATTTTAATATAAGAGTCT TAGAAACATAGCAATTTCAT
Downstream 100 bases:
>100_bases TTAAGAAATCTTTTATTCCAAAAAATAATCTTGGATTATTTTACTAGATAATGATGGAAGATCTATATGCGGAAGATGTC CACAATTTTGTAACCCTACA
Product: phosphatidate cytidylyltransferase
Products: NA
Alternate protein names: CDP-DAG synthase; CDP-DG synthase; CDP-diacylglycerol synthase; CDS; CDP-diglyceride pyrophosphorylase; CDP-diglyceride synthase; CTP:phosphatidate cytidylyltransferase [H]
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MRLRSGLLIGIFGLIVVLMGGWFFTLATAMLTYLALLEFFRMAEFKGIRPATKTTLFSSFIIIVSTYLETIGLIEGEISN SILPICSVGICTWLLLQPKPGTISDIAASIFGLFYLGFLPSYWIKLRGLDSVIISSNQGFISFENLSNTTGLHLTLTSCF LIVASDIGSYFIGKSFGKKSLSPISPSKTIEGLIGGISCSTLLAIFFAFLLNWENPLFVGIIYGISISLMALVGDLIESM MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVLYYIFIILKYLN
Sequences:
>Translated_285_residues MRLRSGLLIGIFGLIVVLMGGWFFTLATAMLTYLALLEFFRMAEFKGIRPATKTTLFSSFIIIVSTYLETIGLIEGEISN SILPICSVGICTWLLLQPKPGTISDIAASIFGLFYLGFLPSYWIKLRGLDSVIISSNQGFISFENLSNTTGLHLTLTSCF LIVASDIGSYFIGKSFGKKSLSPISPSKTIEGLIGGISCSTLLAIFFAFLLNWENPLFVGIIYGISISLMALVGDLIESM MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVLYYIFIILKYLN >Mature_285_residues MRLRSGLLIGIFGLIVVLMGGWFFTLATAMLTYLALLEFFRMAEFKGIRPATKTTLFSSFIIIVSTYLETIGLIEGEISN SILPICSVGICTWLLLQPKPGTISDIAASIFGLFYLGFLPSYWIKLRGLDSVIISSNQGFISFENLSNTTGLHLTLTSCF LIVASDIGSYFIGKSFGKKSLSPISPSKTIEGLIGGISCSTLLAIFFAFLLNWENPLFVGIIYGISISLMALVGDLIESM MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVLYYIFIILKYLN
Specific function: Phospholipid biosynthesis. [C]
COG id: COG0575
COG function: function code I; CDP-diglyceride synthetase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDS family [H]
Homologues:
Organism=Escherichia coli, GI87081696, Length=107, Percent_Identity=45.7943925233645, Blast_Score=97, Evalue=1e-21, Organism=Escherichia coli, GI1787677, Length=114, Percent_Identity=43.859649122807, Blast_Score=95, Evalue=4e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000374 [H]
Pfam domain/function: PF01148 CTP_transf_1 [H]
EC number: =2.7.7.41 [H]
Molecular weight: Translated: 31267; Mature: 31267
Theoretical pI: Translated: 8.29; Mature: 8.29
Prosite motif: PS01315 CDS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRSGLLIGIFGLIVVLMGGWFFTLATAMLTYLALLEFFRMAEFKGIRPATKTTLFSSF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IIIVSTYLETIGLIEGEISNSILPICSVGICTWLLLQPKPGTISDIAASIFGLFYLGFLP HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHH SYWIKLRGLDSVIISSNQGFISFENLSNTTGLHLTLTSCFLIVASDIGSYFIGKSFGKKS HHHHHHCCCCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LSPISPSKTIEGLIGGISCSTLLAIFFAFLLNWENPLFVGIIYGISISLMALVGDLIESM CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVLYYIFIILKYLN HHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC >Mature Secondary Structure MRLRSGLLIGIFGLIVVLMGGWFFTLATAMLTYLALLEFFRMAEFKGIRPATKTTLFSSF CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH IIIVSTYLETIGLIEGEISNSILPICSVGICTWLLLQPKPGTISDIAASIFGLFYLGFLP HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHH SYWIKLRGLDSVIISSNQGFISFENLSNTTGLHLTLTSCFLIVASDIGSYFIGKSFGKKS HHHHHHCCCCCEEEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC LSPISPSKTIEGLIGGISCSTLLAIFFAFLLNWENPLFVGIIYGISISLMALVGDLIESM CCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH MKRDAKIKDSGTFLPGHGGILDRIDSYIFTPSVLYYIFIILKYLN HHCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]