| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is folD [H]
Identifier: 123968707
GI number: 123968707
Start: 989255
End: 990151
Strand: Direct
Name: folD [H]
Synonym: A9601_11741
Alternate gene names: 123968707
Gene position: 989255-990151 (Clockwise)
Preceding gene: 123968705
Following gene: 123968708
Centisome position: 59.24
GC content: 32.22
Gene sequence:
>897_bases ATGTCATTAAAATTAGACGGTAAAAAATTATCTCTTGAAATTGAAAAAAGATTAAATGACTACATTTCTAATAATAAAAT AATTGCAAAAAGAGTGCCCGGTTTAGCTGTAATAAGAATAGGTGAAGACCCTGCGAGTGGTGTTTACGTTAATAACAAGG AAAAGGCATGTTCAAGGATTGGAATAAAGAGCTTTATCTTTCATTTAGATGAAAGTGTAGAGCAAAAAGAAGTTGAACAA TTAATAATCAAACTGAATTCGGATAAGGATATTGATGGAATGTTGCTACAACTTCCCATCCCAAAGAAGTTTGATGAGCA AAAACTGATCAGCCATATTAATCCAAGCAAAGATGTAGATGGATTAAATGAGATAAACATCGGTAAATTAGTAAAAAATG AGCCTGGGATGAGATCATGTACACCCGCAGGAATTATTAATTTATTAAGATCCCAAAATATTACAATTGAAGGTAAGAAA ATTGTTGTTATTGGAAGAAGTTTGCTTGTTGGGAAACCTCTATCGCTTATGTTATTGAATCTAAATGGCACTGTAACAAT GACCCATTCAAAAACATTAAATTTGAATAAAGTCTGTAGAGAAGCCGACATATTAATTGCGGCTGCAGGAAAACCCAATC TTATAGATTCGAGTTTTGTTAAAGAAGGAGCCGTAATTATTGATGTTGGAATACATAGATTAAAAAGTTCCGATAAAAAT CAAACCAGATTATGTGGAGATGTATTATTAGAAGATGTCATTTCTAAAGTATTTGCTTACACACCTGTACCAGGAGGTGT TGGACCAATGACAGTAACAATGTTACTTGTAAATACTATTTTTAGCTGGCAAAAACAATTTGGTTTATCATCAACTCTTA ATGACCTTTTGCCATAA
Upstream 100 bases:
>100_bases TTTAGGGAAGTTGTGATGTTTTGCACAGAATATAAATAAATCTATTTGAATAATTTAAAATTATAGGCATGCTAGGTGTA AAAAGGAGATGTTTTTCTAA
Downstream 100 bases:
>100_bases ACTCCAAGATGCAAAATTTTTTTACTAACGGTATAAAATGACTGAAGTTATAAATAATATTTCTGATTTTGAAAAATATC TTAAAAACACAAAAAAGGTT
Product: bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase
Products: NA
Alternate protein names: Methylenetetrahydrofolate dehydrogenase; Methenyltetrahydrofolate cyclohydrolase [H]
Number of amino acids: Translated: 298; Mature: 297
Protein sequence:
>298_residues MSLKLDGKKLSLEIEKRLNDYISNNKIIAKRVPGLAVIRIGEDPASGVYVNNKEKACSRIGIKSFIFHLDESVEQKEVEQ LIIKLNSDKDIDGMLLQLPIPKKFDEQKLISHINPSKDVDGLNEINIGKLVKNEPGMRSCTPAGIINLLRSQNITIEGKK IVVIGRSLLVGKPLSLMLLNLNGTVTMTHSKTLNLNKVCREADILIAAAGKPNLIDSSFVKEGAVIIDVGIHRLKSSDKN QTRLCGDVLLEDVISKVFAYTPVPGGVGPMTVTMLLVNTIFSWQKQFGLSSTLNDLLP
Sequences:
>Translated_298_residues MSLKLDGKKLSLEIEKRLNDYISNNKIIAKRVPGLAVIRIGEDPASGVYVNNKEKACSRIGIKSFIFHLDESVEQKEVEQ LIIKLNSDKDIDGMLLQLPIPKKFDEQKLISHINPSKDVDGLNEINIGKLVKNEPGMRSCTPAGIINLLRSQNITIEGKK IVVIGRSLLVGKPLSLMLLNLNGTVTMTHSKTLNLNKVCREADILIAAAGKPNLIDSSFVKEGAVIIDVGIHRLKSSDKN QTRLCGDVLLEDVISKVFAYTPVPGGVGPMTVTMLLVNTIFSWQKQFGLSSTLNDLLP >Mature_297_residues SLKLDGKKLSLEIEKRLNDYISNNKIIAKRVPGLAVIRIGEDPASGVYVNNKEKACSRIGIKSFIFHLDESVEQKEVEQL IIKLNSDKDIDGMLLQLPIPKKFDEQKLISHINPSKDVDGLNEINIGKLVKNEPGMRSCTPAGIINLLRSQNITIEGKKI VVIGRSLLVGKPLSLMLLNLNGTVTMTHSKTLNLNKVCREADILIAAAGKPNLIDSSFVKEGAVIIDVGIHRLKSSDKNQ TRLCGDVLLEDVISKVFAYTPVPGGVGPMTVTMLLVNTIFSWQKQFGLSSTLNDLLP
Specific function: Catalyzes the oxidation of 5,10- methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10-methenyltetrahydrofolate to 10- formyltetrahydrofolate [H]
COG id: COG0190
COG function: function code H; 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tetrahydrofolate dehydrogenase/cyclohydrolase family [H]
Homologues:
Organism=Homo sapiens, GI94721354, Length=296, Percent_Identity=40.5405405405405, Blast_Score=201, Evalue=6e-52, Organism=Homo sapiens, GI222136639, Length=290, Percent_Identity=37.9310344827586, Blast_Score=195, Evalue=4e-50, Organism=Homo sapiens, GI222418558, Length=292, Percent_Identity=39.3835616438356, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI36796743, Length=200, Percent_Identity=29.5, Blast_Score=75, Evalue=5e-14, Organism=Escherichia coli, GI1786741, Length=276, Percent_Identity=43.1159420289855, Blast_Score=234, Evalue=5e-63, Organism=Caenorhabditis elegans, GI17568735, Length=268, Percent_Identity=39.5522388059701, Blast_Score=178, Evalue=3e-45, Organism=Saccharomyces cerevisiae, GI6321643, Length=302, Percent_Identity=40.7284768211921, Blast_Score=212, Evalue=6e-56, Organism=Saccharomyces cerevisiae, GI6319558, Length=298, Percent_Identity=39.9328859060403, Blast_Score=209, Evalue=5e-55, Organism=Saccharomyces cerevisiae, GI6322933, Length=282, Percent_Identity=26.5957446808511, Blast_Score=82, Evalue=1e-16, Organism=Drosophila melanogaster, GI17136818, Length=297, Percent_Identity=40.0673400673401, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI17136816, Length=297, Percent_Identity=40.0673400673401, Blast_Score=212, Evalue=2e-55, Organism=Drosophila melanogaster, GI62472483, Length=283, Percent_Identity=37.4558303886926, Blast_Score=187, Evalue=7e-48, Organism=Drosophila melanogaster, GI45551871, Length=283, Percent_Identity=37.4558303886926, Blast_Score=187, Evalue=7e-48, Organism=Drosophila melanogaster, GI24645718, Length=286, Percent_Identity=37.0629370629371, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI17137370, Length=286, Percent_Identity=37.0629370629371, Blast_Score=187, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016040 - InterPro: IPR000672 - InterPro: IPR020630 - InterPro: IPR020867 - InterPro: IPR020631 [H]
Pfam domain/function: PF00763 THF_DHG_CYH; PF02882 THF_DHG_CYH_C [H]
EC number: =1.5.1.5; =3.5.4.9 [H]
Molecular weight: Translated: 32687; Mature: 32556
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: PS00767 THF_DHG_CYH_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKLDGKKLSLEIEKRLNDYISNNKIIAKRVPGLAVIRIGEDPASGVYVNNKEKACSRI CCEECCCCEEEEEHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCEEECCHHHHHHHH GIKSFIFHLDESVEQKEVEQLIIKLNSDKDIDGMLLQLPIPKKFDEQKLISHINPSKDVD HHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCC GLNEINIGKLVKNEPGMRSCTPAGIINLLRSQNITIEGKKIVVIGRSLLVGKPLSLMLLN CCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCEEECCCEEEEEECHHHHCCCCEEEEEE LNGTVTMTHSKTLNLNKVCREADILIAAAGKPNLIDSSFVKEGAVIIDVGIHRLKSSDKN CCCEEEEEECCCCCHHHHHHHCCEEEEECCCCCCCCHHHHHCCCEEEEECHHHHCCCCCC QTRLCGDVLLEDVISKVFAYTPVPGGVGPMTVTMLLVNTIFSWQKQFGLSSTLNDLLP HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC >Mature Secondary Structure SLKLDGKKLSLEIEKRLNDYISNNKIIAKRVPGLAVIRIGEDPASGVYVNNKEKACSRI CEECCCCEEEEEHHHHHHHHHCCCEEEEEECCCEEEEEECCCCCCCEEECCHHHHHHHH GIKSFIFHLDESVEQKEVEQLIIKLNSDKDIDGMLLQLPIPKKFDEQKLISHINPSKDVD HHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCC GLNEINIGKLVKNEPGMRSCTPAGIINLLRSQNITIEGKKIVVIGRSLLVGKPLSLMLLN CCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCEEECCCEEEEEECHHHHCCCCEEEEEE LNGTVTMTHSKTLNLNKVCREADILIAAAGKPNLIDSSFVKEGAVIIDVGIHRLKSSDKN CCCEEEEEECCCCCHHHHHHHCCEEEEECCCCCCCCHHHHHCCCEEEEECHHHHCCCCCC QTRLCGDVLLEDVISKVFAYTPVPGGVGPMTVTMLLVNTIFSWQKQFGLSSTLNDLLP HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA