Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123968605

Identifier: 123968605

GI number: 123968605

Start: 924141

End: 924944

Strand: Reverse

Name: 123968605

Synonym: A9601_10721

Alternate gene names: NA

Gene position: 924944-924141 (Counterclockwise)

Preceding gene: 123968606

Following gene: 123968604

Centisome position: 55.39

GC content: 22.39

Gene sequence:

>804_bases
ATGAACAATAATATAAGATTTGAATTATCGTTTAAAAATATTTCTCAGTTAGAAAATAAACTTAACTTCTGCAAATCTAA
TAATATAAAAAATATCAATATTCCATGTAAAGGACTTATAAAGAAGGATTTATTTAATTCAACTTTTAAATATATAACAA
AAAACTATAATGAATTTAATGTAACCTATCACTATAGTCTTTATCATCAATATTCAGAAAATAAAGAAATATCGTATCAG
GATTTTTTAGATTTTGTTAAAAGTTCTCAGACTAATAAAAATTATCAAATTCTGCTTGTTTCGGGATCTAAAAAGAAAAA
AAACTTTGACTCAGTTGATGTATTAGCTTATTTAAAAAAAGAAAAAAATTTAAAACTTAAATTAGGTATAGCTTACAATC
CATATTTGAAAAAGTATTATAATATTTTTTCAGAAAGAGAAAGGTTCGAAAGAAAAATTTCGACTGGATTAATAAATTCA
ATTTGGTTTCAATATGGCACAGATATTAAAGTTCTTCAGAATGAGTTGACTTATCTAAAGAAAATAGCAAAAGATCAAAA
ATTAAATCTATTTGGAAGTTTATTTATTCCCTCTAAACAATTTATAGCGCGGTTTAAATTTCGTCCTTGGAAAGAGGTAT
ACATATCAGAAAAGTGTTTATTTACCTTAGAAAAATTTTTTGATTTTACAAGAGATTTAGTTAGTTTTTATAAAAATAAT
AATATTACTCCTGTAATTGAATCTGATTTTTCATCATCAGATAAACTTGATTCTGTTTATAGTTTTTTAGAAAATGAAAG
ATAA

Upstream 100 bases:

>100_bases
TTTTAAAGGCTAAGAATAAAAAGACGACTTCCAAATTAAGAATCGTAGCAGATGCTTGTTTTCGTTAATATGTTGAGTGA
TTAAATATGACTACTAAATA

Downstream 100 bases:

>100_bases
TTTCTGCAAATATTAAATCAATGAAAAGTGATTTTACATATGACTTATTAATAATAGGTGGAGGTATATCTGCGTGTGTT
TTTGCTTCGAAGATTCTGAA

Product: amphipathic helix repeat-containing protein

Products: NA

Alternate protein names: Paired Amphipathic Helix Repeat

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MNNNIRFELSFKNISQLENKLNFCKSNNIKNINIPCKGLIKKDLFNSTFKYITKNYNEFNVTYHYSLYHQYSENKEISYQ
DFLDFVKSSQTNKNYQILLVSGSKKKKNFDSVDVLAYLKKEKNLKLKLGIAYNPYLKKYYNIFSERERFERKISTGLINS
IWFQYGTDIKVLQNELTYLKKIAKDQKLNLFGSLFIPSKQFIARFKFRPWKEVYISEKCLFTLEKFFDFTRDLVSFYKNN
NITPVIESDFSSSDKLDSVYSFLENER

Sequences:

>Translated_267_residues
MNNNIRFELSFKNISQLENKLNFCKSNNIKNINIPCKGLIKKDLFNSTFKYITKNYNEFNVTYHYSLYHQYSENKEISYQ
DFLDFVKSSQTNKNYQILLVSGSKKKKNFDSVDVLAYLKKEKNLKLKLGIAYNPYLKKYYNIFSERERFERKISTGLINS
IWFQYGTDIKVLQNELTYLKKIAKDQKLNLFGSLFIPSKQFIARFKFRPWKEVYISEKCLFTLEKFFDFTRDLVSFYKNN
NITPVIESDFSSSDKLDSVYSFLENER
>Mature_267_residues
MNNNIRFELSFKNISQLENKLNFCKSNNIKNINIPCKGLIKKDLFNSTFKYITKNYNEFNVTYHYSLYHQYSENKEISYQ
DFLDFVKSSQTNKNYQILLVSGSKKKKNFDSVDVLAYLKKEKNLKLKLGIAYNPYLKKYYNIFSERERFERKISTGLINS
IWFQYGTDIKVLQNELTYLKKIAKDQKLNLFGSLFIPSKQFIARFKFRPWKEVYISEKCLFTLEKFFDFTRDLVSFYKNN
NITPVIESDFSSSDKLDSVYSFLENER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31957; Mature: 31957

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNNIRFELSFKNISQLENKLNFCKSNNIKNINIPCKGLIKKDLFNSTFKYITKNYNEFN
CCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCEEE
VTYHYSLYHQYSENKEISYQDFLDFVKSSQTNKNYQILLVSGSKKKKNFDSVDVLAYLKK
EEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
EKNLKLKLGIAYNPYLKKYYNIFSERERFERKISTGLINSIWFQYGTDIKVLQNELTYLK
CCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KIAKDQKLNLFGSLFIPSKQFIARFKFRPWKEVYISEKCLFTLEKFFDFTRDLVSFYKNN
HHHCCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NITPVIESDFSSSDKLDSVYSFLENER
CCCEEECCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNNNIRFELSFKNISQLENKLNFCKSNNIKNINIPCKGLIKKDLFNSTFKYITKNYNEFN
CCCCEEEEEEHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCEEE
VTYHYSLYHQYSENKEISYQDFLDFVKSSQTNKNYQILLVSGSKKKKNFDSVDVLAYLKK
EEEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHH
EKNLKLKLGIAYNPYLKKYYNIFSERERFERKISTGLINSIWFQYGTDIKVLQNELTYLK
CCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KIAKDQKLNLFGSLFIPSKQFIARFKFRPWKEVYISEKCLFTLEKFFDFTRDLVSFYKNN
HHHCCCCCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NITPVIESDFSSSDKLDSVYSFLENER
CCCEEECCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA