Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is 123968452

Identifier: 123968452

GI number: 123968452

Start: 790903

End: 791265

Strand: Reverse

Name: 123968452

Synonym: A9601_09191

Alternate gene names: NA

Gene position: 791265-790903 (Counterclockwise)

Preceding gene: 123968453

Following gene: 123968451

Centisome position: 47.38

GC content: 39.67

Gene sequence:

>363_bases
ATGATGATGAAATTTCACTATTTAGCTTTATTATTTTGTTTTTCTCCTATCGCTCAAGTTAATGCAACAACTCCAAAATC
AGTAACTTGTACAAGAACTGAATATAGAGAAGAGTACATTCCTGGAACGAAATCAAACCCTGGCTACGTAAAAAGTTATG
AGGTAGACGTTGTAATACCTTGTGGAGGTCAAAACAAAGCTGAAAAAATAGATGATAATGACTGTAGTGAAGGTTCTGTT
ATAGGGGGTCTTCTTGGTGCTGGAATTGCATTATCCTCATCTAGAGGTAAAGACAGGTTTTGGGCCGTACCAGCGGGCGG
TACTGCAGGAGCGCTAATTGGATGTCAGGTGGATGGTGGTTAA

Upstream 100 bases:

>100_bases
AAACATAAATTTTTTATTAGGGGCCTCACTAGTTTTATTAGGAACTATTATATCTACTACCAAAATAATCAAAAGGACAT
AGAATATTATTAGATTAAAA

Downstream 100 bases:

>100_bases
TTGATTAGTTGGATAAATGGAGATTTAGTTGATTTATGGCAAACTAATCAAAAATCTTTTGTTTTAATAAATTGTCAAGG
ATTAGGATACGAAATACAAA

Product: cAMP phosphodiesterases class-II

Products: NA

Alternate protein names: CAMP Phosphodiesterase Class-II-Like; CAMP Phosphodiesterases Class-II

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MMMKFHYLALLFCFSPIAQVNATTPKSVTCTRTEYREEYIPGTKSNPGYVKSYEVDVVIPCGGQNKAEKIDDNDCSEGSV
IGGLLGAGIALSSSRGKDRFWAVPAGGTAGALIGCQVDGG

Sequences:

>Translated_120_residues
MMMKFHYLALLFCFSPIAQVNATTPKSVTCTRTEYREEYIPGTKSNPGYVKSYEVDVVIPCGGQNKAEKIDDNDCSEGSV
IGGLLGAGIALSSSRGKDRFWAVPAGGTAGALIGCQVDGG
>Mature_120_residues
MMMKFHYLALLFCFSPIAQVNATTPKSVTCTRTEYREEYIPGTKSNPGYVKSYEVDVVIPCGGQNKAEKIDDNDCSEGSV
IGGLLGAGIALSSSRGKDRFWAVPAGGTAGALIGCQVDGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12658; Mature: 12658

Theoretical pI: Translated: 5.83; Mature: 5.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMMKFHYLALLFCFSPIAQVNATTPKSVTCTRTEYREEYIPGTKSNPGYVKSYEVDVVIP
CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCCCCCCCCEEEEEEEEEEEE
CGGQNKAEKIDDNDCSEGSVIGGLLGAGIALSSSRGKDRFWAVPAGGTAGALIGCQVDGG
CCCCCCCCCCCCCCCCCCCEEHHHHHCCEEEECCCCCCEEEEECCCCCCCEEEEEEECCC
>Mature Secondary Structure
MMMKFHYLALLFCFSPIAQVNATTPKSVTCTRTEYREEYIPGTKSNPGYVKSYEVDVVIP
CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHCCCCCCCCCEEEEEEEEEEEE
CGGQNKAEKIDDNDCSEGSVIGGLLGAGIALSSSRGKDRFWAVPAGGTAGALIGCQVDGG
CCCCCCCCCCCCCCCCCCCEEHHHHHCCEEEECCCCCCEEEEECCCCCCCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA