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The map label for this gene is yijE [C]

Identifier: 123968453

GI number: 123968453

Start: 791284

End: 792174

Strand: Reverse

Name: yijE [C]

Synonym: A9601_09201

Alternate gene names: 123968453

Gene position: 792174-791284 (Counterclockwise)

Preceding gene: 123968455

Following gene: 123968452

Centisome position: 47.44

GC content: 25.59

Gene sequence:

>891_bases
ATGATAAATATCGAAGAATTAGAAAAAAGAATTAATTCATTAAAAAAGTATAATTTAGTATTTGCCTCATTCTTCTTCAG
TTTGATGACTTTGTGCGTAAAAAATATTGATAAAAGGATACCTATCTTTGAATTAGTTTTATTCAGATCATTGTTAAGTT
TAATAATTACATTATTAATAATTAATATAAAAAATATAAATCCTTGGGGCAAAAATAAACCATTACTTATTTTAAGAGGT
TTTTTAGGAACTTTAGCTTTAGTTTGTATTTTTTATGCGATAAGAAATATGCCTCTTAGTATTTCTACAGTCATTCAGTA
CACATATCCTATTTTTATATCTATATTTGCTGCCATATTTATAAACGAAAAAATAACTCGTAATATAATTTTTGCTTTAA
TTATTGCCTGGTTTGGAATATTAACAATATTGAATCCAAGCCAATTATCAATTGTAAACGTTGAAATTGAAATTATTTCG
ATTTTGATAGCATTTCTTGGAGCAATCTGCACCGCATTAGCCTACGTTACAGTTAAGAAACTCTCATTTAGTGAAGATAT
TTATGTAATTATTGAATATTTTCCACTTGTTTCTTTTATAACTCTATTACCAATTGTATTAATCAATTGGGTCACCCCAA
ATTGGAGTGAATTAGTTTGGATATTAGGAATTGGCTTATTTACTCAATTAGGTCAGACTTTCTTAACTATTGGATTAAAA
AATTTACCTGCTTCTGAAGCATCAATAATTAATTATTTACAAGTTTTATTTGGTTCAATTTGGGGGATTTTATTTTTTAG
TGAAATAATAAACATAAATTTTTTATTAGGGGCCTCACTAGTTTTATTAGGAACTATTATATCTACTACCAAAATAATCA
AAAGGACATAG

Upstream 100 bases:

>100_bases
CCATTGAGATTATTATCGAAAAATAAATAGTGATTTATTTGTTATAGGTCAAAATCAAGTAAGAATCTACTTAATTTCAC
AATAAAATTATTTTTTTTAA

Downstream 100 bases:

>100_bases
AATATTATTAGATTAAAAATGATGATGAAATTTCACTATTTAGCTTTATTATTTTGTTTTTCTCCTATCGCTCAAGTTAA
TGCAACAACTCCAAAATCAG

Product: integral membrane protein, DUF6

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MINIEELEKRINSLKKYNLVFASFFFSLMTLCVKNIDKRIPIFELVLFRSLLSLIITLLIINIKNINPWGKNKPLLILRG
FLGTLALVCIFYAIRNMPLSISTVIQYTYPIFISIFAAIFINEKITRNIIFALIIAWFGILTILNPSQLSIVNVEIEIIS
ILIAFLGAICTALAYVTVKKLSFSEDIYVIIEYFPLVSFITLLPIVLINWVTPNWSELVWILGIGLFTQLGQTFLTIGLK
NLPASEASIINYLQVLFGSIWGILFFSEIININFLLGASLVLLGTIISTTKIIKRT

Sequences:

>Translated_296_residues
MINIEELEKRINSLKKYNLVFASFFFSLMTLCVKNIDKRIPIFELVLFRSLLSLIITLLIINIKNINPWGKNKPLLILRG
FLGTLALVCIFYAIRNMPLSISTVIQYTYPIFISIFAAIFINEKITRNIIFALIIAWFGILTILNPSQLSIVNVEIEIIS
ILIAFLGAICTALAYVTVKKLSFSEDIYVIIEYFPLVSFITLLPIVLINWVTPNWSELVWILGIGLFTQLGQTFLTIGLK
NLPASEASIINYLQVLFGSIWGILFFSEIININFLLGASLVLLGTIISTTKIIKRT
>Mature_296_residues
MINIEELEKRINSLKKYNLVFASFFFSLMTLCVKNIDKRIPIFELVLFRSLLSLIITLLIINIKNINPWGKNKPLLILRG
FLGTLALVCIFYAIRNMPLSISTVIQYTYPIFISIFAAIFINEKITRNIIFALIIAWFGILTILNPSQLSIVNVEIEIIS
ILIAFLGAICTALAYVTVKKLSFSEDIYVIIEYFPLVSFITLLPIVLINWVTPNWSELVWILGIGLFTQLGQTFLTIGLK
NLPASEASIINYLQVLFGSIWGILFFSEIININFLLGASLVLLGTIISTTKIIKRT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 DUF6 domains [H]

Homologues:

Organism=Homo sapiens, GI197927233, Length=248, Percent_Identity=27.8225806451613, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI23397492, Length=248, Percent_Identity=27.8225806451613, Blast_Score=71, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6324991, Length=303, Percent_Identity=21.1221122112211, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24645940, Length=308, Percent_Identity=28.2467532467532, Blast_Score=92, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 33490; Mature: 33490

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINIEELEKRINSLKKYNLVFASFFFSLMTLCVKNIDKRIPIFELVLFRSLLSLIITLLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
INIKNINPWGKNKPLLILRGFLGTLALVCIFYAIRNMPLSISTVIQYTYPIFISIFAAIF
HHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
INEKITRNIIFALIIAWFGILTILNPSQLSIVNVEIEIISILIAFLGAICTALAYVTVKK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFSEDIYVIIEYFPLVSFITLLPIVLINWVTPNWSELVWILGIGLFTQLGQTFLTIGLK
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NLPASEASIINYLQVLFGSIWGILFFSEIININFLLGASLVLLGTIISTTKIIKRT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MINIEELEKRINSLKKYNLVFASFFFSLMTLCVKNIDKRIPIFELVLFRSLLSLIITLLI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
INIKNINPWGKNKPLLILRGFLGTLALVCIFYAIRNMPLSISTVIQYTYPIFISIFAAIF
HHCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
INEKITRNIIFALIIAWFGILTILNPSQLSIVNVEIEIISILIAFLGAICTALAYVTVKK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHH
LSFSEDIYVIIEYFPLVSFITLLPIVLINWVTPNWSELVWILGIGLFTQLGQTFLTIGLK
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NLPASEASIINYLQVLFGSIWGILFFSEIININFLLGASLVLLGTIISTTKIIKRT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]