| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is 123967792
Identifier: 123967792
GI number: 123967792
Start: 237236
End: 237643
Strand: Reverse
Name: 123967792
Synonym: A9601_02551
Alternate gene names: NA
Gene position: 237643-237236 (Counterclockwise)
Preceding gene: 123967794
Following gene: 123967791
Centisome position: 14.23
GC content: 30.39
Gene sequence:
>408_bases ATGACTGAATCAAACAAATCATTATTTGGTAAACCTGGCACATTTTATATTTACAAATCTTATGGCATTCATCATTGTTT AAATATAGTTACTGATAGAGAAAATTTTGCAAGTGGTGTTTTGATAAGATCAGTTTTTATATCTAACAAGAATGAAAGAT TAGCTTCTGGACCTGGCCTAGTAACTAAAACATTCAGTGTAGACATTTCATTTAACTCACTTGAAGTTCTTGATAACAAA TCTTTATGGATTTCTCCACGAGACTCCACTCTAGAAGAAAAAGATCTTATTCAAACAACGAGAATTGGCATATCAAAGGC AAAAAATATAAAATGGCGTTGGTATCTCAAAAATAGTAGGAGTGTAAGTAAAAGATTAAAAGGTGACAGAACACCTAAAT TTCTATAA
Upstream 100 bases:
>100_bases CCTCATAAAAAAAAATAATGAGATAGATCAAGTTAAAGGGATAATTGTTGAAACTGAAGCTTATTCACAGGAAGAAGAGG CCTGTCATGGCTACCGCAAA
Downstream 100 bases:
>100_bases TCATTTATCTTTTTAAACGTAATGCAAATTTGGCCTCATAAACATATACACACACTAGCTAATTTTTCAATTAAAGATTA TGAGTCAGTATTTGAATTAG
Product: methylpurine-DNA glycosylase (MPG)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 135; Mature: 134
Protein sequence:
>135_residues MTESNKSLFGKPGTFYIYKSYGIHHCLNIVTDRENFASGVLIRSVFISNKNERLASGPGLVTKTFSVDISFNSLEVLDNK SLWISPRDSTLEEKDLIQTTRIGISKAKNIKWRWYLKNSRSVSKRLKGDRTPKFL
Sequences:
>Translated_135_residues MTESNKSLFGKPGTFYIYKSYGIHHCLNIVTDRENFASGVLIRSVFISNKNERLASGPGLVTKTFSVDISFNSLEVLDNK SLWISPRDSTLEEKDLIQTTRIGISKAKNIKWRWYLKNSRSVSKRLKGDRTPKFL >Mature_134_residues TESNKSLFGKPGTFYIYKSYGIHHCLNIVTDRENFASGVLIRSVFISNKNERLASGPGLVTKTFSVDISFNSLEVLDNKS LWISPRDSTLEEKDLIQTTRIGISKAKNIKWRWYLKNSRSVSKRLKGDRTPKFL
Specific function: Unknown
COG id: COG2094
COG function: function code L; 3-methyladenine DNA glycosylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA glycosylase MPG family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011034 - InterPro: IPR003180 [H]
Pfam domain/function: PF02245 Pur_DNA_glyco [H]
EC number: 3.2.2.-
Molecular weight: Translated: 15447; Mature: 15316
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTESNKSLFGKPGTFYIYKSYGIHHCLNIVTDRENFASGVLIRSVFISNKNERLASGPGL CCCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHEEEEEECCCCCCCCCCCCCE VTKTFSVDISFNSLEVLDNKSLWISPRDSTLEEKDLIQTTRIGISKAKNIKWRWYLKNSR EEEEEEEEEECCCEEEECCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCC SVSKRLKGDRTPKFL HHHHHHCCCCCCCCC >Mature Secondary Structure TESNKSLFGKPGTFYIYKSYGIHHCLNIVTDRENFASGVLIRSVFISNKNERLASGPGL CCCCCCCCCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHEEEEEECCCCCCCCCCCCCE VTKTFSVDISFNSLEVLDNKSLWISPRDSTLEEKDLIQTTRIGISKAKNIKWRWYLKNSR EEEEEEEEEECCCEEEECCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCC SVSKRLKGDRTPKFL HHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA