Click here to switch to the map view.

The map label for this gene is crtR

Identifier: 123967794

GI number: 123967794

Start: 238284

End: 239117

Strand: Reverse

Name: crtR

Synonym: A9601_02571

Alternate gene names: NA

Gene position: 239117-238284 (Counterclockwise)

Preceding gene: 123967797

Following gene: 123967792

Centisome position: 14.32

GC content: 31.06

Gene sequence:

>834_bases
TTGCCTTTACTTGTAGCCACTGCTTTTTTAGCTTTACATATTGAGGGTACTGTAATTCATGATGCCTGTCATAAAGCTGC
TCATCCAGTTCCTTGGATAAATCAAGCAATGGGGCATGGCTCAGCTATTCTGTTAGGGTTTAGCTTCCCAGTTTTTACTA
GAGTTCATTTACAACATCATATTCACGTAAATCACCCCAAAAATGATCCAGATCATATTGTCAGTACTTTTGGTCCAATT
TGGCTAATTGCTCCAAGATTTTTTTATCATGAGGTATTTTTCTTTCAAAGAAAACTCTGGCGAAGATATGAATTACTACA
ATGGGGAATTGAAAGATCAATATTCATAACAATCATATTAGCAGGTTTGAAATTTGACTTTATGAATTTAATTTATAATT
TATGGTTCGGCCCAGCATTAATGGTAGGGGTCACTTTAGGAATATTTTTTGATTATTTACCCCATAGACCATTTAGATCA
AGAAATAAATGGATAAATTCTCGAGTTTATCCAAGCAAATTTATGAATTTATTAATAATGGGACAAAATTATCATCTCAT
TCATCATCTTTGGCCATCGATTCCTTGGTTTGAATACAAAATAGCTTATGAAAAAACTAAGCCTTTATTGGATAAAAAAG
GCTCCCCTCAAAGGGTTGGGATATTCGAAAGCAAAGATGACATTTTTAATTTTATTTATGATTTATTAATTGGTGTAAGG
AGTCATAGCAAAAAGAGAGGGAAAATTAGAAAAATCATAAATTTATATCCAAGCTTTAAAATAAAAAAATTTTTATTAAA
GATAGTAAACAAAACATTTATTGGAAGCAACTAA

Upstream 100 bases:

>100_bases
AGATCCGCCAAGTTTTTGGAATCCAACATTAGGTTTATTTTTTGGCGGTTATTTTCTCGCTTTTCTTAGCATATGGCAAT
GGTATAGAGGTGTTTGGCCT

Downstream 100 bases:

>100_bases
CTTACTCATTCATTAAGGATTTTTGGTACTTTAAAATATTTATCTTCTCTCGATGGACCCAATTCTAAAAGTTCTTCATT
GCAATCAGAATTTTTCTTTT

Product: Beta-carotene hydroxylase

Products: NA

Alternate protein names: Fatty Acid Desaturase; Fatty Acid Desaturase Domain Protein; Electron Transfer Protein FdxB; Beta-Carotene Oxygenase CrtR; Fatty Acid Desaturase Family Protein; Beta Carotene Hydroxylase; Phthalate 4 5-Dioxygenase; B-Carotene Hydroxylase; Delta(12)-Fatty Acid Dehydrogenase

Number of amino acids: Translated: 277; Mature: 276

Protein sequence:

>277_residues
MPLLVATAFLALHIEGTVIHDACHKAAHPVPWINQAMGHGSAILLGFSFPVFTRVHLQHHIHVNHPKNDPDHIVSTFGPI
WLIAPRFFYHEVFFFQRKLWRRYELLQWGIERSIFITIILAGLKFDFMNLIYNLWFGPALMVGVTLGIFFDYLPHRPFRS
RNKWINSRVYPSKFMNLLIMGQNYHLIHHLWPSIPWFEYKIAYEKTKPLLDKKGSPQRVGIFESKDDIFNFIYDLLIGVR
SHSKKRGKIRKIINLYPSFKIKKFLLKIVNKTFIGSN

Sequences:

>Translated_277_residues
MPLLVATAFLALHIEGTVIHDACHKAAHPVPWINQAMGHGSAILLGFSFPVFTRVHLQHHIHVNHPKNDPDHIVSTFGPI
WLIAPRFFYHEVFFFQRKLWRRYELLQWGIERSIFITIILAGLKFDFMNLIYNLWFGPALMVGVTLGIFFDYLPHRPFRS
RNKWINSRVYPSKFMNLLIMGQNYHLIHHLWPSIPWFEYKIAYEKTKPLLDKKGSPQRVGIFESKDDIFNFIYDLLIGVR
SHSKKRGKIRKIINLYPSFKIKKFLLKIVNKTFIGSN
>Mature_276_residues
PLLVATAFLALHIEGTVIHDACHKAAHPVPWINQAMGHGSAILLGFSFPVFTRVHLQHHIHVNHPKNDPDHIVSTFGPIW
LIAPRFFYHEVFFFQRKLWRRYELLQWGIERSIFITIILAGLKFDFMNLIYNLWFGPALMVGVTLGIFFDYLPHRPFRSR
NKWINSRVYPSKFMNLLIMGQNYHLIHHLWPSIPWFEYKIAYEKTKPLLDKKGSPQRVGIFESKDDIFNFIYDLLIGVRS
HSKKRGKIRKIINLYPSFKIKKFLLKIVNKTFIGSN

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.14.13.-

Molecular weight: Translated: 32620; Mature: 32489

Theoretical pI: Translated: 10.67; Mature: 10.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLLVATAFLALHIEGTVIHDACHKAAHPVPWINQAMGHGSAILLGFSFPVFTRVHLQHH
CCHHHHHHHHHHHCCCEEHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCHHHHHEEHEEE
IHVNHPKNDPDHIVSTFGPIWLIAPRFFYHEVFFFQRKLWRRYELLQWGIERSIFITIIL
EEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AGLKFDFMNLIYNLWFGPALMVGVTLGIFFDYLPHRPFRSRNKWINSRVYPSKFMNLLIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHEEEEE
GQNYHLIHHLWPSIPWFEYKIAYEKTKPLLDKKGSPQRVGIFESKDDIFNFIYDLLIGVR
CCCCHHHHHHCCCCCCEEEEEEHHHHCHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHH
SHSKKRGKIRKIINLYPSFKIKKFLLKIVNKTFIGSN
HCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
PLLVATAFLALHIEGTVIHDACHKAAHPVPWINQAMGHGSAILLGFSFPVFTRVHLQHH
CHHHHHHHHHHHCCCEEHHHHHHHHCCCCCHHHHHHCCCCEEEEEECCHHHHHEEHEEE
IHVNHPKNDPDHIVSTFGPIWLIAPRFFYHEVFFFQRKLWRRYELLQWGIERSIFITIIL
EEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH
AGLKFDFMNLIYNLWFGPALMVGVTLGIFFDYLPHRPFRSRNKWINSRVYPSKFMNLLIM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCHHHHHEEEEE
GQNYHLIHHLWPSIPWFEYKIAYEKTKPLLDKKGSPQRVGIFESKDDIFNFIYDLLIGVR
CCCCHHHHHHCCCCCCEEEEEEHHHHCHHHCCCCCCCEECCCCCHHHHHHHHHHHHHHHH
SHSKKRGKIRKIINLYPSFKIKKFLLKIVNKTFIGSN
HCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA