Definition Prochlorococcus marinus str. AS9601, complete genome.
Accession NC_008816
Length 1,669,886

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The map label for this gene is ycf34

Identifier: 123967694

GI number: 123967694

Start: 147341

End: 147592

Strand: Reverse

Name: ycf34

Synonym: A9601_01571

Alternate gene names: NA

Gene position: 147592-147341 (Counterclockwise)

Preceding gene: 123967697

Following gene: 123967693

Centisome position: 8.84

GC content: 29.76

Gene sequence:

>252_bases
ATGTGCATTTGCATCAACTGTAAATGGGTTGATAGATGTATCACATATCATGATGTTGAAAATAATCATGGTGTTGATCA
TATTTGTGATCTACCTGATTTTAAAGCAAAAAAACCATTCATTCATGTCAATATAGTTAAAGATAATAATGGTGATTATA
AAACTGATTGGGATGTTCAATCTTGTGAAAGTTTTGAAAATGAATTTGGTAAATGGTCTAAATGCAACCCTGGTATGGAA
TTACCTGTTTAA

Upstream 100 bases:

>100_bases
AAGATTAAATCCAAATTATGAACTTTTATACTTGTTTCTAATTCATCAATTATTAGTGTATGATCTGTGTGAAAGCTCTT
TTTCATTTTATTTATTAATT

Downstream 100 bases:

>100_bases
AGGTAATAGATGACAAATAAACTTCAACAAAGAGAAAATTTCTCTACATTAGTGATTCATAGCACAGATAATTCTTTTGG
CTTTGGGTATAGAAAAAACA

Product: putative Ycf34

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MCICINCKWVDRCITYHDVENNHGVDHICDLPDFKAKKPFIHVNIVKDNNGDYKTDWDVQSCESFENEFGKWSKCNPGME
LPV

Sequences:

>Translated_83_residues
MCICINCKWVDRCITYHDVENNHGVDHICDLPDFKAKKPFIHVNIVKDNNGDYKTDWDVQSCESFENEFGKWSKCNPGME
LPV
>Mature_83_residues
MCICINCKWVDRCITYHDVENNHGVDHICDLPDFKAKKPFIHVNIVKDNNGDYKTDWDVQSCESFENEFGKWSKCNPGME
LPV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9679; Mature: 9679

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

8.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
10.8 %Cys+Met (Translated Protein)
8.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
10.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCICINCKWVDRCITYHDVENNHGVDHICDLPDFKAKKPFIHVNIVKDNNGDYKTDWDVQ
CEEEECCHHHHHHEEEECCCCCCCCCEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCHH
SCESFENEFGKWSKCNPGMELPV
HHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MCICINCKWVDRCITYHDVENNHGVDHICDLPDFKAKKPFIHVNIVKDNNGDYKTDWDVQ
CEEEECCHHHHHHEEEECCCCCCCCCEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCHH
SCESFENEFGKWSKCNPGMELPV
HHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA