| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
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The map label for this gene is ycf34
Identifier: 123967694
GI number: 123967694
Start: 147341
End: 147592
Strand: Reverse
Name: ycf34
Synonym: A9601_01571
Alternate gene names: NA
Gene position: 147592-147341 (Counterclockwise)
Preceding gene: 123967697
Following gene: 123967693
Centisome position: 8.84
GC content: 29.76
Gene sequence:
>252_bases ATGTGCATTTGCATCAACTGTAAATGGGTTGATAGATGTATCACATATCATGATGTTGAAAATAATCATGGTGTTGATCA TATTTGTGATCTACCTGATTTTAAAGCAAAAAAACCATTCATTCATGTCAATATAGTTAAAGATAATAATGGTGATTATA AAACTGATTGGGATGTTCAATCTTGTGAAAGTTTTGAAAATGAATTTGGTAAATGGTCTAAATGCAACCCTGGTATGGAA TTACCTGTTTAA
Upstream 100 bases:
>100_bases AAGATTAAATCCAAATTATGAACTTTTATACTTGTTTCTAATTCATCAATTATTAGTGTATGATCTGTGTGAAAGCTCTT TTTCATTTTATTTATTAATT
Downstream 100 bases:
>100_bases AGGTAATAGATGACAAATAAACTTCAACAAAGAGAAAATTTCTCTACATTAGTGATTCATAGCACAGATAATTCTTTTGG CTTTGGGTATAGAAAAAACA
Product: putative Ycf34
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 83; Mature: 83
Protein sequence:
>83_residues MCICINCKWVDRCITYHDVENNHGVDHICDLPDFKAKKPFIHVNIVKDNNGDYKTDWDVQSCESFENEFGKWSKCNPGME LPV
Sequences:
>Translated_83_residues MCICINCKWVDRCITYHDVENNHGVDHICDLPDFKAKKPFIHVNIVKDNNGDYKTDWDVQSCESFENEFGKWSKCNPGME LPV >Mature_83_residues MCICINCKWVDRCITYHDVENNHGVDHICDLPDFKAKKPFIHVNIVKDNNGDYKTDWDVQSCESFENEFGKWSKCNPGME LPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9679; Mature: 9679
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
8.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 10.8 %Cys+Met (Translated Protein) 8.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 10.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCICINCKWVDRCITYHDVENNHGVDHICDLPDFKAKKPFIHVNIVKDNNGDYKTDWDVQ CEEEECCHHHHHHEEEECCCCCCCCCEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCHH SCESFENEFGKWSKCNPGMELPV HHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MCICINCKWVDRCITYHDVENNHGVDHICDLPDFKAKKPFIHVNIVKDNNGDYKTDWDVQ CEEEECCHHHHHHEEEECCCCCCCCCEECCCCCCCCCCCEEEEEEEECCCCCCCCCCCHH SCESFENEFGKWSKCNPGMELPV HHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA