| Definition | Prochlorococcus marinus str. AS9601, complete genome. |
|---|---|
| Accession | NC_008816 |
| Length | 1,669,886 |
Click here to switch to the map view.
The map label for this gene is 123967693
Identifier: 123967693
GI number: 123967693
Start: 146678
End: 147331
Strand: Reverse
Name: 123967693
Synonym: A9601_01561
Alternate gene names: NA
Gene position: 147331-146678 (Counterclockwise)
Preceding gene: 123967694
Following gene: 123967687
Centisome position: 8.82
GC content: 27.98
Gene sequence:
>654_bases ATGACAAATAAACTTCAACAAAGAGAAAATTTCTCTACATTAGTGATTCATAGCACAGATAATTCTTTTGGCTTTGGGTA TAGAAAAAACAGTAATTCTGAATCTGATGAATTATTCATCAAAAAATTTGATAATGACCTTTGCAACATCTTAATAAATG ATCTTAACAACTTCATTTCCAAAGAAAATTTACAAGAAATAAATAGGTTATCTGTCAGTGTAGGTCCTGCAAATTTTAAT GCTTCTCGACTTATTGTAGTTTTAGCAAGAACTATCTCACAACAAATCAATTGTCCTCTAGACAGTTTTAGTTCATTTGA AATAATGGCAAAAAGAATTGCATCAAAAAATAATATCTTGATAAACAAAAAATCATTCTGGATCTACAAAAAATTAAAAC GAAAGGGTGTTATTGCTGGTAAATATGAAATTTGTCATAACGAAAACAATCCCTCGGATCTAGTCATTCGAGAAACAGTT TTACCAAAAGTAGTCAAAGATCTTGATAGTAGAGAACCTTTTTTTGAAGCTATTTACGATGATAAAGAAGATTTAAGAGA ACTATTAGATTTATCTAATAAAAATTTATTAAATTCAAATATAGATTCCTGGAAAAAAGTTTTGCCTCTTTACCCTCTTT CTCCAATTAACTAA
Upstream 100 bases:
>100_bases AACTGATTGGGATGTTCAATCTTGTGAAAGTTTTGAAAATGAATTTGGTAAATGGTCTAAATGCAACCCTGGTATGGAAT TACCTGTTTAAAGGTAATAG
Downstream 100 bases:
>100_bases ATATTCATCCAATTAAAGAATTAATTTGATCTTGAAGATGCATTGTTACATAATTCAGATCATCTCTTGATGAACTTTGT GGAGGTTGAACAGGTTTTCC
Product: putative molecular chaperone
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MTNKLQQRENFSTLVIHSTDNSFGFGYRKNSNSESDELFIKKFDNDLCNILINDLNNFISKENLQEINRLSVSVGPANFN ASRLIVVLARTISQQINCPLDSFSSFEIMAKRIASKNNILINKKSFWIYKKLKRKGVIAGKYEICHNENNPSDLVIRETV LPKVVKDLDSREPFFEAIYDDKEDLRELLDLSNKNLLNSNIDSWKKVLPLYPLSPIN
Sequences:
>Translated_217_residues MTNKLQQRENFSTLVIHSTDNSFGFGYRKNSNSESDELFIKKFDNDLCNILINDLNNFISKENLQEINRLSVSVGPANFN ASRLIVVLARTISQQINCPLDSFSSFEIMAKRIASKNNILINKKSFWIYKKLKRKGVIAGKYEICHNENNPSDLVIRETV LPKVVKDLDSREPFFEAIYDDKEDLRELLDLSNKNLLNSNIDSWKKVLPLYPLSPIN >Mature_216_residues TNKLQQRENFSTLVIHSTDNSFGFGYRKNSNSESDELFIKKFDNDLCNILINDLNNFISKENLQEINRLSVSVGPANFNA SRLIVVLARTISQQINCPLDSFSSFEIMAKRIASKNNILINKKSFWIYKKLKRKGVIAGKYEICHNENNPSDLVIRETVL PKVVKDLDSREPFFEAIYDDKEDLRELLDLSNKNLLNSNIDSWKKVLPLYPLSPIN
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25005; Mature: 24874
Theoretical pI: Translated: 8.79; Mature: 8.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNKLQQRENFSTLVIHSTDNSFGFGYRKNSNSESDELFIKKFDNDLCNILINDLNNFIS CCCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KENLQEINRLSVSVGPANFNASRLIVVLARTISQQINCPLDSFSSFEIMAKRIASKNNIL HHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEE INKKSFWIYKKLKRKGVIAGKYEICHNENNPSDLVIRETVLPKVVKDLDSREPFFEAIYD EECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHCC DKEDLRELLDLSNKNLLNSNIDSWKKVLPLYPLSPIN CHHHHHHHHCCCCCCHHCCCHHHHHHHCCCCCCCCCC >Mature Secondary Structure TNKLQQRENFSTLVIHSTDNSFGFGYRKNSNSESDELFIKKFDNDLCNILINDLNNFIS CCHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KENLQEINRLSVSVGPANFNASRLIVVLARTISQQINCPLDSFSSFEIMAKRIASKNNIL HHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEE INKKSFWIYKKLKRKGVIAGKYEICHNENNPSDLVIRETVLPKVVKDLDSREPFFEAIYD EECCHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEHHHHHHHHHHHCCCCCHHHHHHCC DKEDLRELLDLSNKNLLNSNIDSWKKVLPLYPLSPIN CHHHHHHHHCCCCCCHHCCCHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA