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The map label for this gene is crtB [H]

Identifier: 123967697

GI number: 123967697

Start: 149303

End: 150211

Strand: Reverse

Name: crtB [H]

Synonym: A9601_01601

Alternate gene names: 123967697

Gene position: 150211-149303 (Counterclockwise)

Preceding gene: 123967698

Following gene: 123967694

Centisome position: 9.0

GC content: 34.43

Gene sequence:

>909_bases
TTGAAAAATTCAATTTCTCAACTAGATCAAGCATACGAGATATGCCGAAAAGAAACCCAAAAATGGGCTAAAACCTTTTA
CTTGGGAACGCTTCTGCTACCTGTAGAGAAAAGAAAAGCCATTTGGGCTATTTATGTTTGGTGTAGAAGAACAGATGAAA
TAATGGATAGCTTAGAAGCTTCAACTAAATCGCAAGATGAACTAGCAGAAAATTTAAACGAATGGGAAGAAAATACAAAG
AATGTTTTTAAAGGCAACATTAAATCCGAATTAGATGCCGTTCTACTAGACACCATCGAAAAATATCCACAAAGTATTCA
ACCTTATCTAGACATGATAGATGGCCAGAGAATGGATCTTAATAAATTTAGATACAAAGATTTTGATGAATTAAAACTCT
ATTGTTATAGAGTCGCAGGGACAGTTGGTTTGATGACTCAGAATGTCATGGGAATTGATAGTGCGTACACATCCGCTCCA
TGGAGTGCCAAACCTGACCCCTCAGAAGCCGCTATAGCTCTAGGTATAGCTAATCAATTAACGAATATATTGAGAGATGT
CGGCGAAGATAGGCAAAGAGGTAGAATTTATCTTCCTCAAGAGGATATTGAAAAATTTAATTATTCTGAAGAAAAACTTT
TAAAAGGTGAAATAAACAAACAATGGAAAGCACTAATGAACTTTCAATTAAATAGAGCTCGCGATTGGTTCCAGAAATCT
GAAGATGGAATCAAATGGTTATCTTCTGACGCAAGATGGCCTGTTTGGACATCCTTACGACTTTACAGAGGAATATTAGA
TTCTATAGAAAGGCTAGACTATGATGTCTTTAATAATAGAGCTTATGTAAAAAATTCAGTAAAAGCTTTTGAAATTCCTA
TATCTTTTTTAATTTCTCGAATTAGATGA

Upstream 100 bases:

>100_bases
ATTATGCGCAGAATCAATTAATAAGGAGTACTCCAAAATTCCTCAAAATGTTTCTGCATGAGATTTTCATCCCAGTAATT
TAAAATTCATCTAAAACTTT

Downstream 100 bases:

>100_bases
CTAAGCAGGAGTCTTCTGATTAGCCAACAAATCTTTTAATTTAGATAGTTCTCCAGCCCATCTTGGATCAGGAGCTTCTA
AGTTAGGTGCATCACTGTGA

Product: squalene and phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MKNSISQLDQAYEICRKETQKWAKTFYLGTLLLPVEKRKAIWAIYVWCRRTDEIMDSLEASTKSQDELAENLNEWEENTK
NVFKGNIKSELDAVLLDTIEKYPQSIQPYLDMIDGQRMDLNKFRYKDFDELKLYCYRVAGTVGLMTQNVMGIDSAYTSAP
WSAKPDPSEAAIALGIANQLTNILRDVGEDRQRGRIYLPQEDIEKFNYSEEKLLKGEINKQWKALMNFQLNRARDWFQKS
EDGIKWLSSDARWPVWTSLRLYRGILDSIERLDYDVFNNRAYVKNSVKAFEIPISFLISRIR

Sequences:

>Translated_302_residues
MKNSISQLDQAYEICRKETQKWAKTFYLGTLLLPVEKRKAIWAIYVWCRRTDEIMDSLEASTKSQDELAENLNEWEENTK
NVFKGNIKSELDAVLLDTIEKYPQSIQPYLDMIDGQRMDLNKFRYKDFDELKLYCYRVAGTVGLMTQNVMGIDSAYTSAP
WSAKPDPSEAAIALGIANQLTNILRDVGEDRQRGRIYLPQEDIEKFNYSEEKLLKGEINKQWKALMNFQLNRARDWFQKS
EDGIKWLSSDARWPVWTSLRLYRGILDSIERLDYDVFNNRAYVKNSVKAFEIPISFLISRIR
>Mature_302_residues
MKNSISQLDQAYEICRKETQKWAKTFYLGTLLLPVEKRKAIWAIYVWCRRTDEIMDSLEASTKSQDELAENLNEWEENTK
NVFKGNIKSELDAVLLDTIEKYPQSIQPYLDMIDGQRMDLNKFRYKDFDELKLYCYRVAGTVGLMTQNVMGIDSAYTSAP
WSAKPDPSEAAIALGIANQLTNILRDVGEDRQRGRIYLPQEDIEKFNYSEEKLLKGEINKQWKALMNFQLNRARDWFQKS
EDGIKWLSSDARWPVWTSLRLYRGILDSIERLDYDVFNNRAYVKNSVKAFEIPISFLISRIR

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 35422; Mature: 35422

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNSISQLDQAYEICRKETQKWAKTFYLGTLLLPVEKRKAIWAIYVWCRRTDEIMDSLEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
STKSQDELAENLNEWEENTKNVFKGNIKSELDAVLLDTIEKYPQSIQPYLDMIDGQRMDL
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
NKFRYKDFDELKLYCYRVAGTVGLMTQNVMGIDSAYTSAPWSAKPDPSEAAIALGIANQL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHH
TNILRDVGEDRQRGRIYLPQEDIEKFNYSEEKLLKGEINKQWKALMNFQLNRARDWFQKS
HHHHHHHCCHHHCCEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EDGIKWLSSDARWPVWTSLRLYRGILDSIERLDYDVFNNRAYVKNSVKAFEIPISFLISR
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHCCCHHHHHHHHHHHHH
IR
CC
>Mature Secondary Structure
MKNSISQLDQAYEICRKETQKWAKTFYLGTLLLPVEKRKAIWAIYVWCRRTDEIMDSLEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
STKSQDELAENLNEWEENTKNVFKGNIKSELDAVLLDTIEKYPQSIQPYLDMIDGQRMDL
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
NKFRYKDFDELKLYCYRVAGTVGLMTQNVMGIDSAYTSAPWSAKPDPSEAAIALGIANQL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCHHHHHHHHHHHH
TNILRDVGEDRQRGRIYLPQEDIEKFNYSEEKLLKGEINKQWKALMNFQLNRARDWFQKS
HHHHHHHCCHHHCCEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
EDGIKWLSSDARWPVWTSLRLYRGILDSIERLDYDVFNNRAYVKNSVKAFEIPISFLISR
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHCCCHHHHHHHHHHHHH
IR
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8018713; 8905231 [H]