Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is dinG

Identifier: 123966984

GI number: 123966984

Start: 1536120

End: 1537568

Strand: Reverse

Name: dinG

Synonym: P9515_17511

Alternate gene names: NA

Gene position: 1537568-1536120 (Counterclockwise)

Preceding gene: 123966986

Following gene: 123966983

Centisome position: 90.22

GC content: 25.12

Gene sequence:

>1449_bases
ATGCTTGAAATTTTAAGTCATCAATACTTAAAGAGATTTATTAGATTCCATAAAACAGATTGGAACCATATTTATTCTTT
TGGACGAATAATTTCAAAGTGTTTAAAAACAAATGACACTTATCTGATTAACTCAGAAATTTTTTCTACAAATAATTGGA
TTCCCGCATTGTTGATTTCTTTATTCTTATTTGAAGAAAATTCAACTTTTGTTTTATCTCAAGAAAAAATAGAATTTTTA
AAAAAAAATCAATTAGGTGATTTAAAAAAATTTGGATTTGATTTTATTTTAGAAAATGATCAAATAATTTTTTCAAATCA
TCGAGTTTATTTGATCACCCTTGAGAAATTATTGCATGATTTAGATCTTTTTAGTTCTAACAATCATCGCATTATCTTCT
CTGGGATTGAAAATATAAAAGAAGATTTAAAAAATAATTTTAGAATTTTATTGTTGAAAAAAAATTGGTTTCATAATTTT
GATAAATCATCATCCACATATCAAAAGATTATTGGCACTTATAGTTTTCTCAAAAAGAAGTTTTTCTTAAGGAAATCTTT
AAATAATGAATATATTTTTTTAGATAAAGAAGAAATAAATTTTCTTGCACAATTCTTTTATGAACATTCTTCATACTCTG
ATCAATTTTTAAAAGTTAGTAATGCTTTATCTGAAGGATGGGCATGCTGGGTTACTTTAGATGAAATAAATTTCGAATGG
AATTTTTATTTAGAACCTATCAACGAACTTTCTCTGATTAAAAAATTATTTAATAATAATAAATTTGTTTTTTTATCAGC
TTTAAGAAAAGATAATTTTTTTCAAAATTACCTTAAAAAGGAAAGTATAGATATTGATTTAGTGATGAATTTCAAGAGTA
ATTTTAATGAAAAAAAAATCGTAGTATATGCTCCGCCCAGACAAATACTCCCAAATAATCCAATGTTCACTCAAATTATT
ATTGATAAGTGTAAAAAGCTTATAATATTCAGAAAAGGACTTACTTTAATTTTATCTGATGATCTTAATTTAAAGCATAA
CCTTGCTACAGAACTAGCTTCTACTCATGGAAAGCAAGTCTTGCTAGAGACTATTCCTTCGCATAATAATGAAATTCTAT
GTGCTAGTTATGTGTGGTGGATTAATAATTCTTATTTAATAAAAAGTCCTGAACAAATAATTATTCCACTGCTACCTATC
CCAAATATGTCAGAACCAATAAATGAAATTACCGTTTTAAATAAAATAAATCTTTCCAAAGATTGGTTTCGAGAATTTTT
ACTTCCGGAGGCAATACAAAAATTAGAAAGATCAATTTCACCTCTAAGAAAAAACTCTGGTAAATTAATAATTCTTGATG
GAAGATTAAATAAAAGGAAATGGGGTAGATCAATTTTGCAAAGTATTCAGCCATCTAAACAAATAAACTATGTGCTTCCT
TACGATTAA

Upstream 100 bases:

>100_bases
TATTCATTGATTTACTAATTTGAGACTTTTTATATTAATACCAATATTTTGTATATTAGGATCATGATTTTTCTTTATTG
GACATCACTAAAATTATATA

Downstream 100 bases:

>100_bases
GTTATTATTCAGGAAATATCTTTTAATATGGGAGAAGCAAAAAGGAGAAAATCGTTAGGTCTTCCTCCTAAAAAATACAA
ATCTAAATCTAAATCAGATC

Product: Rad3-related DNA helicase

Products: NA

Alternate protein names: ATP-Dependent DNA Helicase; ATP-Dependent DNA Helicase DinG; Carboxyl-Terminal Protease; Rad3-Like DNA Helicase-Like Protein; DNA Helicase; Rad3-Related DNA Helicases

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MLEILSHQYLKRFIRFHKTDWNHIYSFGRIISKCLKTNDTYLINSEIFSTNNWIPALLISLFLFEENSTFVLSQEKIEFL
KKNQLGDLKKFGFDFILENDQIIFSNHRVYLITLEKLLHDLDLFSSNNHRIIFSGIENIKEDLKNNFRILLLKKNWFHNF
DKSSSTYQKIIGTYSFLKKKFFLRKSLNNEYIFLDKEEINFLAQFFYEHSSYSDQFLKVSNALSEGWACWVTLDEINFEW
NFYLEPINELSLIKKLFNNNKFVFLSALRKDNFFQNYLKKESIDIDLVMNFKSNFNEKKIVVYAPPRQILPNNPMFTQII
IDKCKKLIIFRKGLTLILSDDLNLKHNLATELASTHGKQVLLETIPSHNNEILCASYVWWINNSYLIKSPEQIIIPLLPI
PNMSEPINEITVLNKINLSKDWFREFLLPEAIQKLERSISPLRKNSGKLIILDGRLNKRKWGRSILQSIQPSKQINYVLP
YD

Sequences:

>Translated_482_residues
MLEILSHQYLKRFIRFHKTDWNHIYSFGRIISKCLKTNDTYLINSEIFSTNNWIPALLISLFLFEENSTFVLSQEKIEFL
KKNQLGDLKKFGFDFILENDQIIFSNHRVYLITLEKLLHDLDLFSSNNHRIIFSGIENIKEDLKNNFRILLLKKNWFHNF
DKSSSTYQKIIGTYSFLKKKFFLRKSLNNEYIFLDKEEINFLAQFFYEHSSYSDQFLKVSNALSEGWACWVTLDEINFEW
NFYLEPINELSLIKKLFNNNKFVFLSALRKDNFFQNYLKKESIDIDLVMNFKSNFNEKKIVVYAPPRQILPNNPMFTQII
IDKCKKLIIFRKGLTLILSDDLNLKHNLATELASTHGKQVLLETIPSHNNEILCASYVWWINNSYLIKSPEQIIIPLLPI
PNMSEPINEITVLNKINLSKDWFREFLLPEAIQKLERSISPLRKNSGKLIILDGRLNKRKWGRSILQSIQPSKQINYVLP
YD
>Mature_482_residues
MLEILSHQYLKRFIRFHKTDWNHIYSFGRIISKCLKTNDTYLINSEIFSTNNWIPALLISLFLFEENSTFVLSQEKIEFL
KKNQLGDLKKFGFDFILENDQIIFSNHRVYLITLEKLLHDLDLFSSNNHRIIFSGIENIKEDLKNNFRILLLKKNWFHNF
DKSSSTYQKIIGTYSFLKKKFFLRKSLNNEYIFLDKEEINFLAQFFYEHSSYSDQFLKVSNALSEGWACWVTLDEINFEW
NFYLEPINELSLIKKLFNNNKFVFLSALRKDNFFQNYLKKESIDIDLVMNFKSNFNEKKIVVYAPPRQILPNNPMFTQII
IDKCKKLIIFRKGLTLILSDDLNLKHNLATELASTHGKQVLLETIPSHNNEILCASYVWWINNSYLIKSPEQIIIPLLPI
PNMSEPINEITVLNKINLSKDWFREFLLPEAIQKLERSISPLRKNSGKLIILDGRLNKRKWGRSILQSIQPSKQINYVLP
YD

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57175; Mature: 57175

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEILSHQYLKRFIRFHKTDWNHIYSFGRIISKCLKTNDTYLINSEIFSTNNWIPALLIS
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECEEECCCCCHHHHHHH
LFLFEENSTFVLSQEKIEFLKKNQLGDLKKFGFDFILENDQIIFSNHRVYLITLEKLLHD
HHHCCCCCEEEEEHHHHHHHHHCCCCCHHHCCCEEEEECCEEEEECCEEEEEEHHHHHHH
LDLFSSNNHRIIFSGIENIKEDLKNNFRILLLKKNWFHNFDKSSSTYQKIIGTYSFLKKK
HHHHCCCCCEEEEHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
FFLRKSLNNEYIFLDKEEINFLAQFFYEHSSYSDQFLKVSNALSEGWACWVTLDEINFEW
HHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEEECEEE
NFYLEPINELSLIKKLFNNNKFVFLSALRKDNFFQNYLKKESIDIDLVMNFKSNFNEKKI
EEEECCHHHHHHHHHHHCCCCEEEEEEHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCEE
VVYAPPRQILPNNPMFTQIIIDKCKKLIIFRKGLTLILSDDLNLKHNLATELASTHGKQV
EEECCCHHHCCCCCCHHHHHHHHHHHHEEEECCCEEEEECCCCCHHHHHHHHHHCCCCEE
LLETIPSHNNEILCASYVWWINNSYLIKSPEQIIIPLLPIPNMSEPINEITVLNKINLSK
EEHHCCCCCCCEEEEEEEEEECCCEEEECCCEEEEEEECCCCCCCCHHHEEEEEECCCCH
DWFREFLLPEAIQKLERSISPLRKNSGKLIILDGRLNKRKWGRSILQSIQPSKQINYVLP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEC
YD
CC
>Mature Secondary Structure
MLEILSHQYLKRFIRFHKTDWNHIYSFGRIISKCLKTNDTYLINSEIFSTNNWIPALLIS
CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEECEEECCCCCHHHHHHH
LFLFEENSTFVLSQEKIEFLKKNQLGDLKKFGFDFILENDQIIFSNHRVYLITLEKLLHD
HHHCCCCCEEEEEHHHHHHHHHCCCCCHHHCCCEEEEECCEEEEECCEEEEEEHHHHHHH
LDLFSSNNHRIIFSGIENIKEDLKNNFRILLLKKNWFHNFDKSSSTYQKIIGTYSFLKKK
HHHHCCCCCEEEEHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHH
FFLRKSLNNEYIFLDKEEINFLAQFFYEHSSYSDQFLKVSNALSEGWACWVTLDEINFEW
HHHHHCCCCCEEEEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEEEEECEEE
NFYLEPINELSLIKKLFNNNKFVFLSALRKDNFFQNYLKKESIDIDLVMNFKSNFNEKKI
EEEECCHHHHHHHHHHHCCCCEEEEEEHHCCHHHHHHHHHCCCCEEEEEECCCCCCCCEE
VVYAPPRQILPNNPMFTQIIIDKCKKLIIFRKGLTLILSDDLNLKHNLATELASTHGKQV
EEECCCHHHCCCCCCHHHHHHHHHHHHEEEECCCEEEEECCCCCHHHHHHHHHHCCCCEE
LLETIPSHNNEILCASYVWWINNSYLIKSPEQIIIPLLPIPNMSEPINEITVLNKINLSK
EEHHCCCCCCCEEEEEEEEEECCCEEEECCCEEEEEEECCCCCCCCHHHEEEEEECCCCH
DWFREFLLPEAIQKLERSISPLRKNSGKLIILDGRLNKRKWGRSILQSIQPSKQINYVLP
HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCEEEC
YD
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA