| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966908
Identifier: 123966908
GI number: 123966908
Start: 1471274
End: 1471513
Strand: Reverse
Name: 123966908
Synonym: P9515_16751
Alternate gene names: NA
Gene position: 1471513-1471274 (Counterclockwise)
Preceding gene: 123966912
Following gene: 123966903
Centisome position: 86.35
GC content: 30.83
Gene sequence:
>240_bases ATGTCAAAAATTGATCCTGAATTAAAAAAAAAATTACTTAAGGAAACTCAGGCCCCTTTTAAAGGATTAAGAAAAGTATT ATGGATTGCTTTTACAGGTTCAGCTTTTTTAGGTCTTTTCATAATGCTTTCGAAAATTGCTAGTGGTAGTGAAATTCAGC AAAATAATCTCCTAATACAATTAGGAGCTTGCGCATTATTCCCTTTTCTATTATTCCTCGAAAGAAATAGAGGGAATTAA
Upstream 100 bases:
>100_bases ACCTTCTGTTTACGAAACAGTTGCTCTTCCTCTGAGCTATACCGGCGATAAAAATTTTTGAAATTTTTCATATAGAATAA TTTTATATTTGAAATAATTA
Downstream 100 bases:
>100_bases ATTATTTATTTAGGGTCCTTTTTTTTGTTACAAATTTGAATGCTTCTATGATGTCTCCCTCATTCCAAGTTGAGAATTTA TCACATCCAACTCCACATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MSKIDPELKKKLLKETQAPFKGLRKVLWIAFTGSAFLGLFIMLSKIASGSEIQQNNLLIQLGACALFPFLLFLERNRGN
Sequences:
>Translated_79_residues MSKIDPELKKKLLKETQAPFKGLRKVLWIAFTGSAFLGLFIMLSKIASGSEIQQNNLLIQLGACALFPFLLFLERNRGN >Mature_78_residues SKIDPELKKKLLKETQAPFKGLRKVLWIAFTGSAFLGLFIMLSKIASGSEIQQNNLLIQLGACALFPFLLFLERNRGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8868; Mature: 8737
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIDPELKKKLLKETQAPFKGLRKVLWIAFTGSAFLGLFIMLSKIASGSEIQQNNLLIQ CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE LGACALFPFLLFLERNRGN ECHHHHHHHHHHHHCCCCC >Mature Secondary Structure SKIDPELKKKLLKETQAPFKGLRKVLWIAFTGSAFLGLFIMLSKIASGSEIQQNNLLIQ CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEE LGACALFPFLLFLERNRGN ECHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA