Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123966859

Identifier: 123966859

GI number: 123966859

Start: 1421908

End: 1422975

Strand: Reverse

Name: 123966859

Synonym: P9515_16261

Alternate gene names: NA

Gene position: 1422975-1421908 (Counterclockwise)

Preceding gene: 123966860

Following gene: 123966854

Centisome position: 83.5

GC content: 34.18

Gene sequence:

>1068_bases
ATGGACATTTCACCTACAATTTTTATTATTCCAACTGGGATTGGATGTGAAATCGGAGGTTTTGCTGGAGATTCCCTCCC
TGCTGCAAAATTGTTAGCCTCCGCAAGTGGATGCTTAATTACTCATCCCAATGTTATGAATGGGGGTTCTCTTGCAGAAA
AACACAAAGATATTTTTTATGTCGAAGGTTATAGCTTAGATAGATTTGCTAAAGGAGAAATTGGCCTCAAAAGTGTAAAA
CAGCAGAAAATTGGAATAATTTTTGATTCAAGCATTGAACATGAAATATTAATAAGACATTTACAAGTCGCAGATGCTTG
TGTCGCAACATTAGGAATTGATGTTGATTCTTATGTATTAACAAAAAAGCCTTTAGGAATAAGTATTGATTCTGAATCAC
AAGGTATCAGCGAAGGTTTAATTGAAAATCCCGATACTTTAATTGAAGCAGGAGAAATGTTGATAAATAAAGGTATGACG
GCAATAGCGATAGTAGCTAAATTCCCTGATGATTTAGATTTAGTTGAAACAAATTCATATAGGGAGGGAAAAGGTGTTGA
TCCCATAGCAGGAGTTGAGGCTGTAATAAGTCATTTGATAAGTAAGTTTCTCAAAGTTCCCTGTGCACATGCACCTGCAT
TAAGTCCAATTGAATTGAATGAAAATTTAGATCCTCGGGCGGCTTCCGAAGAAATAGGATATACATTTTTGCCCTCAGTA
TTGATTGGTTTAAGTAAGGCTCCAGATCTTATAGAATTATCTGATAAAAGCGACAGTATTACCTTACACCCAAGTCATGT
CGAATCTATTGTGATTCCAAGTGGTTCATTAGGCGGAGAAGCAGTTTTAGCCGGAATGGAAAGAGGATTAAATATAATTG
CTGTAAAAAATCAAAATATTATAAACCTTGATAATAATATTTATAACTATCCTAAACTCATTGAGGTGGATAATTATTTT
GAGGCATCAGGTTTAGTTCTTGCTATAAGAGAAGGAATTAACCCTAAATCAATTAAAAGACCTTTAAATAAAATTCAAGA
AATGACTTTTAAAAAGATGGGATCTTAG

Upstream 100 bases:

>100_bases
GATATAAAAGCTTCAGTAGAATCATCTCATGTAAAGAAAATAAGAATTAAAGCTGTTTTAGAAAAACAAATCAATTCATC
AATATAAATCAAGATAGTAA

Downstream 100 bases:

>100_bases
TAAGAAATTGCAATTGGGACTCTCCAGTCACTTCCCAGTGATTGACTACTTAGTTTTAGTATAGGAGGAGCTTGTTTTCT
TTTGAATTCGGCTTTTTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MDISPTIFIIPTGIGCEIGGFAGDSLPAAKLLASASGCLITHPNVMNGGSLAEKHKDIFYVEGYSLDRFAKGEIGLKSVK
QQKIGIIFDSSIEHEILIRHLQVADACVATLGIDVDSYVLTKKPLGISIDSESQGISEGLIENPDTLIEAGEMLINKGMT
AIAIVAKFPDDLDLVETNSYREGKGVDPIAGVEAVISHLISKFLKVPCAHAPALSPIELNENLDPRAASEEIGYTFLPSV
LIGLSKAPDLIELSDKSDSITLHPSHVESIVIPSGSLGGEAVLAGMERGLNIIAVKNQNIINLDNNIYNYPKLIEVDNYF
EASGLVLAIREGINPKSIKRPLNKIQEMTFKKMGS

Sequences:

>Translated_355_residues
MDISPTIFIIPTGIGCEIGGFAGDSLPAAKLLASASGCLITHPNVMNGGSLAEKHKDIFYVEGYSLDRFAKGEIGLKSVK
QQKIGIIFDSSIEHEILIRHLQVADACVATLGIDVDSYVLTKKPLGISIDSESQGISEGLIENPDTLIEAGEMLINKGMT
AIAIVAKFPDDLDLVETNSYREGKGVDPIAGVEAVISHLISKFLKVPCAHAPALSPIELNENLDPRAASEEIGYTFLPSV
LIGLSKAPDLIELSDKSDSITLHPSHVESIVIPSGSLGGEAVLAGMERGLNIIAVKNQNIINLDNNIYNYPKLIEVDNYF
EASGLVLAIREGINPKSIKRPLNKIQEMTFKKMGS
>Mature_355_residues
MDISPTIFIIPTGIGCEIGGFAGDSLPAAKLLASASGCLITHPNVMNGGSLAEKHKDIFYVEGYSLDRFAKGEIGLKSVK
QQKIGIIFDSSIEHEILIRHLQVADACVATLGIDVDSYVLTKKPLGISIDSESQGISEGLIENPDTLIEAGEMLINKGMT
AIAIVAKFPDDLDLVETNSYREGKGVDPIAGVEAVISHLISKFLKVPCAHAPALSPIELNENLDPRAASEEIGYTFLPSV
LIGLSKAPDLIELSDKSDSITLHPSHVESIVIPSGSLGGEAVLAGMERGLNIIAVKNQNIINLDNNIYNYPKLIEVDNYF
EASGLVLAIREGINPKSIKRPLNKIQEMTFKKMGS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021763 [H]

Pfam domain/function: PF11805 DUF3326 [H]

EC number: NA

Molecular weight: Translated: 38012; Mature: 38012

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDISPTIFIIPTGIGCEIGGFAGDSLPAAKLLASASGCLITHPNVMNGGSLAEKHKDIFY
CCCCCEEEEEECCCCCEECCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCHHHHCCCEEE
VEGYSLDRFAKGEIGLKSVKQQKIGIIFDSSIEHEILIRHLQVADACVATLGIDVDSYVL
EECCCCCCCCCCCCCHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
TKKPLGISIDSESQGISEGLIENPDTLIEAGEMLINKGMTAIAIVAKFPDDLDLVETNSY
ECCCCCEEECCCCCCCHHHCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEECCCC
REGKGVDPIAGVEAVISHLISKFLKVPCAHAPALSPIELNENLDPRAASEEIGYTFLPSV
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCHHHCCHHHHHHH
LIGLSKAPDLIELSDKSDSITLHPSHVESIVIPSGSLGGEAVLAGMERGLNIIAVKNQNI
HHHHCCCCCEEEECCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHCCCEEEEECCCCE
INLDNNIYNYPKLIEVDNYFEASGLVLAIREGINPKSIKRPLNKIQEMTFKKMGS
EECCCCCCCCCCEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDISPTIFIIPTGIGCEIGGFAGDSLPAAKLLASASGCLITHPNVMNGGSLAEKHKDIFY
CCCCCEEEEEECCCCCEECCCCCCCCHHHHHHHCCCCCEEECCCCCCCCCHHHHCCCEEE
VEGYSLDRFAKGEIGLKSVKQQKIGIIFDSSIEHEILIRHLQVADACVATLGIDVDSYVL
EECCCCCCCCCCCCCHHHHHHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEE
TKKPLGISIDSESQGISEGLIENPDTLIEAGEMLINKGMTAIAIVAKFPDDLDLVETNSY
ECCCCCEEECCCCCCCHHHCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEECCCC
REGKGVDPIAGVEAVISHLISKFLKVPCAHAPALSPIELNENLDPRAASEEIGYTFLPSV
CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCHHHCCHHHHHHH
LIGLSKAPDLIELSDKSDSITLHPSHVESIVIPSGSLGGEAVLAGMERGLNIIAVKNQNI
HHHHCCCCCEEEECCCCCEEEECCCCCCEEEECCCCCCHHHHHHHHHCCCEEEEECCCCE
INLDNNIYNYPKLIEVDNYFEASGLVLAIREGINPKSIKRPLNKIQEMTFKKMGS
EECCCCCCCCCCEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 3041005 [H]