Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is 123966677

Identifier: 123966677

GI number: 123966677

Start: 1278256

End: 1278993

Strand: Reverse

Name: 123966677

Synonym: P9515_14441

Alternate gene names: NA

Gene position: 1278993-1278256 (Counterclockwise)

Preceding gene: 123966678

Following gene: 123966675

Centisome position: 75.05

GC content: 38.89

Gene sequence:

>738_bases
ATGCCAGCAAGTAGTAATTTTAATCAAGCGATTAGAGATGCTCAAACTAGTTCCATTGTTGGACCAAATGTAGTAAGTAA
AGCTCTTCCCTACGTAGGGGGAGGAATGGTGTTAACTTCTATGGGAGTGTTGGGAGGGGTCTCATTAATAGCTACAAATC
CTTCATTATTTCAACCTCTTTCTCTTGTTGCTCTAATAGCTGAATTGGTTTTGTTTTTCGTGGCAACGAGTGCGGCAAAT
AATGCAAATAATGCAAAGGCTTTACCTTTGTTAACAGGGTTCAGCTTGTTAACTGGATTTACATTGAGCGGGATAGTAGC
TTTAGCAATTGGAACAGTTGGTATTGGATCCGTTGGTACTGCTGCACTAGCAACAGGAATTACTTTTGTAATAGCCTCAT
ATACAGGCCAAAGAATGAGTGATAGCGTTGGACAAGCTCTTAGTGGAGTTGTTGGACTAGGCTTGATTGGTTTGTTAATA
GCAATGTTTGTTCAGCTCATTGGTGGTTTCTTTGCTCCAGGAATTTTTGGAGGTTCAGGACTTGAACTTATGATTGCAGG
TTTCGGAACAGTTTTATTCGTTGCAATGTCTTTCTTAGACTTTTACACAATGCCGAGAAGATATAGTGACGATCAATATC
TTGCTGGTGCTCTAGGTATGTATTTAACATACATTAATTTATTTGTATTCATTCTAAGACTGATGATTGCTCTTCAAGGT
GGTGGAAGAAGGAATTAA

Upstream 100 bases:

>100_bases
CAAAGAATAATTGAGGCCTATAAATAAACTATTACTGTGGTCATCCGTACACTGAAATGCAAAAAATCAGATAGAATGAG
CGTAGTTAAAAAGGTATAAA

Downstream 100 bases:

>100_bases
AAAATAAATTTAAACCAAAACGTCTATTTGAAGGAAGCGTAGATCTTATCTACGCTTTTTTTATTGTGCAATATCGGAAA
TTTGATGCTTAATAAATTCC

Product: integral membrane protein, interacts with FtsH

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MPASSNFNQAIRDAQTSSIVGPNVVSKALPYVGGGMVLTSMGVLGGVSLIATNPSLFQPLSLVALIAELVLFFVATSAAN
NANNAKALPLLTGFSLLTGFTLSGIVALAIGTVGIGSVGTAALATGITFVIASYTGQRMSDSVGQALSGVVGLGLIGLLI
AMFVQLIGGFFAPGIFGGSGLELMIAGFGTVLFVAMSFLDFYTMPRRYSDDQYLAGALGMYLTYINLFVFILRLMIALQG
GGRRN

Sequences:

>Translated_245_residues
MPASSNFNQAIRDAQTSSIVGPNVVSKALPYVGGGMVLTSMGVLGGVSLIATNPSLFQPLSLVALIAELVLFFVATSAAN
NANNAKALPLLTGFSLLTGFTLSGIVALAIGTVGIGSVGTAALATGITFVIASYTGQRMSDSVGQALSGVVGLGLIGLLI
AMFVQLIGGFFAPGIFGGSGLELMIAGFGTVLFVAMSFLDFYTMPRRYSDDQYLAGALGMYLTYINLFVFILRLMIALQG
GGRRN
>Mature_244_residues
PASSNFNQAIRDAQTSSIVGPNVVSKALPYVGGGMVLTSMGVLGGVSLIATNPSLFQPLSLVALIAELVLFFVATSAANN
ANNAKALPLLTGFSLLTGFTLSGIVALAIGTVGIGSVGTAALATGITFVIASYTGQRMSDSVGQALSGVVGLGLIGLLIA
MFVQLIGGFFAPGIFGGSGLELMIAGFGTVLFVAMSFLDFYTMPRRYSDDQYLAGALGMYLTYINLFVFILRLMIALQGG
GRRN

Specific function: Unknown

COG id: COG0670

COG function: function code R; Integral membrane protein, interacts with FtsH

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25184; Mature: 25053

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPASSNFNQAIRDAQTSSIVGPNVVSKALPYVGGGMVLTSMGVLGGVSLIATNPSLFQPL
CCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCHHHEECCCHHHHHH
SLVALIAELVLFFVATSAANNANNAKALPLLTGFSLLTGFTLSGIVALAIGTVGIGSVGT
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AALATGITFVIASYTGQRMSDSVGQALSGVVGLGLIGLLIAMFVQLIGGFFAPGIFGGSG
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LELMIAGFGTVLFVAMSFLDFYTMPRRYSDDQYLAGALGMYLTYINLFVFILRLMIALQG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GGRRN
CCCCC
>Mature Secondary Structure 
PASSNFNQAIRDAQTSSIVGPNVVSKALPYVGGGMVLTSMGVLGGVSLIATNPSLFQPL
CCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHCHHHEECCCHHHHHH
SLVALIAELVLFFVATSAANNANNAKALPLLTGFSLLTGFTLSGIVALAIGTVGIGSVGT
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
AALATGITFVIASYTGQRMSDSVGQALSGVVGLGLIGLLIAMFVQLIGGFFAPGIFGGSG
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LELMIAGFGTVLFVAMSFLDFYTMPRRYSDDQYLAGALGMYLTYINLFVFILRLMIALQG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GGRRN
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA