| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966607
Identifier: 123966607
GI number: 123966607
Start: 1209210
End: 1210100
Strand: Reverse
Name: 123966607
Synonym: P9515_13741
Alternate gene names: NA
Gene position: 1210100-1209210 (Counterclockwise)
Preceding gene: 123966608
Following gene: 123966606
Centisome position: 71.01
GC content: 24.92
Gene sequence:
>891_bases ATGAATATTTATCTATTTGGTAAAACCTCTTTATCAGGTGAAGCTTTTTATAAATTCTTTAATTTTCAAAATTCAAAATA TAAAATATACTCTTTTTCCAGAGACAAAAAAAGAGGTTATAAACTTGACTTAAAAAAGCCAGACTCTTTTTCTCCTTTAG ACAATGAAGAATTTATATTAATAAGTTTTGCTCCTATATGGCATTTTGCTTCTTTTTTAAATTATTTGTTTTATCATCAA AATTTTAAATTGGTAAACCTTAAAGGAATTATTATTTGTTCTTCCTCTTCTGCATTAACCAAGAGATTTGAATCTAACGA TTATGATAGAAATCTAGCAAAAAAGTTATTAAGATCTGAACATAAGGTAATGTCAATAGCTAAAAATCTTAATATAAATT GTCAGATAATTAGACCAACTTTGATTTATGGTTCTTTAAATAAAATTAAGGATAATAATATTCAAAAAATTTTATTAATA ATGAGAAAATTAAAGATAGTTTGTCTGCCATCTAATTCAGGAACGAGACAACCTATTCACGCATATCAATTGGCAGAAGT TGTTTATTTTTTAATGATTAAATTATTAAAAGAAAAAAGTAAAGTAAGCAATAATTTAATTAATTTGGGTGGGGATATTA TTTTAAATTATCATGAAATTTTAGAATCTTTAAAGAATGCATCAGATAAAAATGATCCTATTAGGAAATGTATTATATTA AAAATCCCAAATAGAATTTTCTTAGTTTCTATACTTCCTGTTATGATTTTTTCTCCGAAATCCTTTGCAGCATTATCTAG GATATGTTCTGATTTATCTGGCTTCGAGAAGGCATGTGAAATTACGAGAAATAAACCTAGAAGTTTTCCTTTCTCAAAAG ATTTCGAGTAA
Upstream 100 bases:
>100_bases AAGTATTTTATTGCTATAAAAATGTATTTGGAATATGTTTTTTTGTACCCTATATATTAAGATATATTCGAAGAATCTTA ACAAGATTATTTAATGAAGT
Downstream 100 bases:
>100_bases ATATGGTAAATATTATTTATTTAGGATATTTTTTTTTAGGTGTATTTACCTCTTATATTATTTTAAAAAATGGTATTAAA TTTTTTGAAATATTTTTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MNIYLFGKTSLSGEAFYKFFNFQNSKYKIYSFSRDKKRGYKLDLKKPDSFSPLDNEEFILISFAPIWHFASFLNYLFYHQ NFKLVNLKGIIICSSSSALTKRFESNDYDRNLAKKLLRSEHKVMSIAKNLNINCQIIRPTLIYGSLNKIKDNNIQKILLI MRKLKIVCLPSNSGTRQPIHAYQLAEVVYFLMIKLLKEKSKVSNNLINLGGDIILNYHEILESLKNASDKNDPIRKCIIL KIPNRIFLVSILPVMIFSPKSFAALSRICSDLSGFEKACEITRNKPRSFPFSKDFE
Sequences:
>Translated_296_residues MNIYLFGKTSLSGEAFYKFFNFQNSKYKIYSFSRDKKRGYKLDLKKPDSFSPLDNEEFILISFAPIWHFASFLNYLFYHQ NFKLVNLKGIIICSSSSALTKRFESNDYDRNLAKKLLRSEHKVMSIAKNLNINCQIIRPTLIYGSLNKIKDNNIQKILLI MRKLKIVCLPSNSGTRQPIHAYQLAEVVYFLMIKLLKEKSKVSNNLINLGGDIILNYHEILESLKNASDKNDPIRKCIIL KIPNRIFLVSILPVMIFSPKSFAALSRICSDLSGFEKACEITRNKPRSFPFSKDFE >Mature_296_residues MNIYLFGKTSLSGEAFYKFFNFQNSKYKIYSFSRDKKRGYKLDLKKPDSFSPLDNEEFILISFAPIWHFASFLNYLFYHQ NFKLVNLKGIIICSSSSALTKRFESNDYDRNLAKKLLRSEHKVMSIAKNLNINCQIIRPTLIYGSLNKIKDNNIQKILLI MRKLKIVCLPSNSGTRQPIHAYQLAEVVYFLMIKLLKEKSKVSNNLINLGGDIILNYHEILESLKNASDKNDPIRKCIIL KIPNRIFLVSILPVMIFSPKSFAALSRICSDLSGFEKACEITRNKPRSFPFSKDFE
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34284; Mature: 34284
Theoretical pI: Translated: 10.29; Mature: 10.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIYLFGKTSLSGEAFYKFFNFQNSKYKIYSFSRDKKRGYKLDLKKPDSFSPLDNEEFIL CEEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEE ISFAPIWHFASFLNYLFYHQNFKLVNLKGIIICSSSSALTKRFESNDYDRNLAKKLLRSE EEECHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHH HKVMSIAKNLNINCQIIRPTLIYGSLNKIKDNNIQKILLIMRKLKIVCLPSNSGTRQPIH HHHHHHHHCCCCEEEEEEEEEEECCHHHCCCCCHHHHHHHHHHCEEEEEECCCCCCCCHH AYQLAEVVYFLMIKLLKEKSKVSNNLINLGGDIILNYHEILESLKNASDKNDPIRKCIIL HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEHHHHHHHHHCCCCCCCHHHEEEEE KIPNRIFLVSILPVMIFSPKSFAALSRICSDLSGFEKACEITRNKPRSFPFSKDFE ECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MNIYLFGKTSLSGEAFYKFFNFQNSKYKIYSFSRDKKRGYKLDLKKPDSFSPLDNEEFIL CEEEEEECCCCCHHHHHHHHCCCCCEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCEEE ISFAPIWHFASFLNYLFYHQNFKLVNLKGIIICSSSSALTKRFESNDYDRNLAKKLLRSE EEECHHHHHHHHHHHHHHHCCEEEEEEEEEEEECCCHHHHHHHCCCCCHHHHHHHHHHHH HKVMSIAKNLNINCQIIRPTLIYGSLNKIKDNNIQKILLIMRKLKIVCLPSNSGTRQPIH HHHHHHHHCCCCEEEEEEEEEEECCHHHCCCCCHHHHHHHHHHCEEEEEECCCCCCCCHH AYQLAEVVYFLMIKLLKEKSKVSNNLINLGGDIILNYHEILESLKNASDKNDPIRKCIIL HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEHHHHHHHHHCCCCCCCHHHEEEEE KIPNRIFLVSILPVMIFSPKSFAALSRICSDLSGFEKACEITRNKPRSFPFSKDFE ECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA