Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

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The map label for this gene is rfe [H]

Identifier: 123966606

GI number: 123966606

Start: 1208221

End: 1209207

Strand: Reverse

Name: rfe [H]

Synonym: P9515_13731

Alternate gene names: 123966606

Gene position: 1209207-1208221 (Counterclockwise)

Preceding gene: 123966607

Following gene: 123966605

Centisome position: 70.96

GC content: 24.42

Gene sequence:

>987_bases
ATGGTAAATATTATTTATTTAGGATATTTTTTTTTAGGTGTATTTACCTCTTATATTATTTTAAAAAATGGTATTAAATT
TTTTGAAATATTTTTTCTAGATAATCCTAATAAAAGAAGCTTACATATAAAACCTATTCCCAGTGCCGGTGGTTTATCTT
TTATAGTTCCTCTAATAATTTATGATTTAATATTCGCTTCATTTAATAATTTTGAAGGTATTGTTTCATTATCTTTATTA
TGTATACCCCTCATATTTATAAGTTTATTAGATGATTTAATAAAGGTCTCGCCAAAATATAGATATCTTTTTCAATTATT
AACCTCTTTTCTTATTTTAGGATTCAGTAATATTAGTTTATTTTTATTAAACCCAATATTAGATATTTTTATTTTAATTT
TTCTTCTTATTTTTATTACTGCAGTAATTAATTTTACGAACTTTATGGATGGCTCAGATGGATTAGTAGCTGGATGTATG
TTTGTTTTGTTTCTAATAATAAATTATAAATTAAATTCAAACATATCCCTTATTGTCCTTTTAGGCTCATTAGCAACTTT
TATTTATTGGAATTGGAATCCAGCAAAAATTTTTATGGGAGATATAGGAAGTACTTTTTTAGGAGTATATTTTGTTGCAA
ATATTCTTCAGTTTAATGATTTAAAAGAAATTGTAGGCTTATTATTAATTGCAAGCCCCTTTTTCGGAGACGCTTTAATT
ACTATATTCAGGCGCTTTTTTTCAAGGCAAAACATATTTAAAGCTCATAGACAACATCTCTACCAAAGACTATATTTAGG
AAAATTATCAAAACAAGAAGTTGCTTTAATATACATATTGCAAATTTCGATAATAGGCATTGTTTACATAAAATTAAATT
TTGTTTACGAAATAGTAAGTATCTTGTCTTGTCTAATTATAATGTATTATTTAGAGAAAAAATATGCCTTGTCCTTTGAG
GAAGCGATGAATAATAAGTTAACTTGA

Upstream 100 bases:

>100_bases
TATCTAGGATATGTTCTGATTTATCTGGCTTCGAGAAGGCATGTGAAATTACGAGAAATAAACCTAGAAGTTTTCCTTTC
TCAAAAGATTTCGAGTAAAT

Downstream 100 bases:

>100_bases
AATTTTTCTTTTGAAATGAATAGATTTTTATTCTTAAAAATAAGTTACCTATTAAGGTATTTACTGAATTTAAAAATTAA
GCATAGAAAAATTTACTTCA

Product: hypothetical protein

Products: UMP; Undecaprenyl N-Acetyl-Alpha-D-Glucosaminyl Pyrophosphate. [C]

Alternate protein names: UDP-GlcNAc:undecaprenyl-phosphate GlcNAc-1-phosphate transferase; Undecaprenyl-Phosphate GlcNAc-1-phosphate transferase [H]

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MVNIIYLGYFFLGVFTSYIILKNGIKFFEIFFLDNPNKRSLHIKPIPSAGGLSFIVPLIIYDLIFASFNNFEGIVSLSLL
CIPLIFISLLDDLIKVSPKYRYLFQLLTSFLILGFSNISLFLLNPILDIFILIFLLIFITAVINFTNFMDGSDGLVAGCM
FVLFLIINYKLNSNISLIVLLGSLATFIYWNWNPAKIFMGDIGSTFLGVYFVANILQFNDLKEIVGLLLIASPFFGDALI
TIFRRFFSRQNIFKAHRQHLYQRLYLGKLSKQEVALIYILQISIIGIVYIKLNFVYEIVSILSCLIIMYYLEKKYALSFE
EAMNNKLT

Sequences:

>Translated_328_residues
MVNIIYLGYFFLGVFTSYIILKNGIKFFEIFFLDNPNKRSLHIKPIPSAGGLSFIVPLIIYDLIFASFNNFEGIVSLSLL
CIPLIFISLLDDLIKVSPKYRYLFQLLTSFLILGFSNISLFLLNPILDIFILIFLLIFITAVINFTNFMDGSDGLVAGCM
FVLFLIINYKLNSNISLIVLLGSLATFIYWNWNPAKIFMGDIGSTFLGVYFVANILQFNDLKEIVGLLLIASPFFGDALI
TIFRRFFSRQNIFKAHRQHLYQRLYLGKLSKQEVALIYILQISIIGIVYIKLNFVYEIVSILSCLIIMYYLEKKYALSFE
EAMNNKLT
>Mature_328_residues
MVNIIYLGYFFLGVFTSYIILKNGIKFFEIFFLDNPNKRSLHIKPIPSAGGLSFIVPLIIYDLIFASFNNFEGIVSLSLL
CIPLIFISLLDDLIKVSPKYRYLFQLLTSFLILGFSNISLFLLNPILDIFILIFLLIFITAVINFTNFMDGSDGLVAGCM
FVLFLIINYKLNSNISLIVLLGSLATFIYWNWNPAKIFMGDIGSTFLGVYFVANILQFNDLKEIVGLLLIASPFFGDALI
TIFRRFFSRQNIFKAHRQHLYQRLYLGKLSKQEVALIYILQISIIGIVYIKLNFVYEIVSILSCLIIMYYLEKKYALSFE
EAMNNKLT

Specific function: Catalyzes the formation of undecaprenyl-PP-N- acetylglucosamine. Involved in the synthesis of anionic cell-wall polymers as it mediates the initiation of the linkage unit formation that appears to be common to the two types of teichoic acids attached to t

COG id: COG0472

COG function: function code M; UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 4 family [H]

Homologues:

Organism=Escherichia coli, GI1790218, Length=273, Percent_Identity=28.2051282051282, Blast_Score=72, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000715
- InterPro:   IPR018480 [H]

Pfam domain/function: PF00953 Glycos_transf_4 [H]

EC number: 2.7.8.- [C]

Molecular weight: Translated: 37671; Mature: 37671

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVNIIYLGYFFLGVFTSYIILKNGIKFFEIFFLDNPNKRSLHIKPIPSAGGLSFIVPLII
CEEEEEHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHH
YDLIFASFNNFEGIVSLSLLCIPLIFISLLDDLIKVSPKYRYLFQLLTSFLILGFSNISL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHH
FLLNPILDIFILIFLLIFITAVINFTNFMDGSDGLVAGCMFVLFLIINYKLNSNISLIVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEHH
LGSLATFIYWNWNPAKIFMGDIGSTFLGVYFVANILQFNDLKEIVGLLLIASPFFGDALI
HHHHHHHEEECCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
TIFRRFFSRQNIFKAHRQHLYQRLYLGKLSKQEVALIYILQISIIGIVYIKLNFVYEIVS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSCLIIMYYLEKKYALSFEEAMNNKLT
HHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVNIIYLGYFFLGVFTSYIILKNGIKFFEIFFLDNPNKRSLHIKPIPSAGGLSFIVPLII
CEEEEEHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHH
YDLIFASFNNFEGIVSLSLLCIPLIFISLLDDLIKVSPKYRYLFQLLTSFLILGFSNISL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHH
FLLNPILDIFILIFLLIFITAVINFTNFMDGSDGLVAGCMFVLFLIINYKLNSNISLIVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEHH
LGSLATFIYWNWNPAKIFMGDIGSTFLGVYFVANILQFNDLKEIVGLLLIASPFFGDALI
HHHHHHHEEECCCHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
TIFRRFFSRQNIFKAHRQHLYQRLYLGKLSKQEVALIYILQISIIGIVYIKLNFVYEIVS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSCLIIMYYLEKKYALSFEEAMNNKLT
HHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: UDP-N-Acetyl-D-Glucosamine; Undecaprenyl Phosphate [C]

Specific reaction: UDP-N-Acetyl-D-Glucosamine + Undecaprenyl Phosphate = UMP + Undecaprenyl N-Acetyl-Alpha-D-Glucosaminyl Pyrophosphate. [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12101296; 9384377 [H]