| Definition | Prochlorococcus marinus str. MIT 9515, complete genome. |
|---|---|
| Accession | NC_008817 |
| Length | 1,704,176 |
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The map label for this gene is 123966608
Identifier: 123966608
GI number: 123966608
Start: 1210097
End: 1210897
Strand: Reverse
Name: 123966608
Synonym: P9515_13751
Alternate gene names: NA
Gene position: 1210897-1210097 (Counterclockwise)
Preceding gene: 123966609
Following gene: 123966607
Centisome position: 71.05
GC content: 24.84
Gene sequence:
>801_bases ATGATAACCTCAATTAAAATAATTGTTCCAACTTTAAATACATATTTAATTCTACCTAAGTTGATAAATTCATTAAAAAT TCAAACTTGGAAAGACTGGAAATTATTATTTATTGATGGAGATTCAACTAAAAAACATTTTAATTGGATTGAGACTTCAT GTTTATCTGATTCTCGAATAAATGTTATTAAACAAGAGAAAAATCATAAAGGAATTTATGGTGCTATGAATCAGGGTTTT AAAACTATAAAAGATAATGAATTAGTACTTTTTTGGGGTTCTGATGATTGGGCTATATCTCCAAGTACGTTTGGAGATAT TATTTCAGAAGTAAATTCATATAAAAATAAATATGATCTTCTTATTTGCAGAGGAAAATATATAGACTTTAAAACTCAAG GGATAATAAGAAAATCATATTTTTTAGAAAATAAATTTTTATTATCCCTTGATAGAAAAAAATTTAGGAAAAGTCTTTTT CTGGGAATGATTCCTCCCCATCAAGCTACATTTTTTAATGCAAATGCTTTTGAGAAGTTGTCAAGTTTTTCCGAGAATTT ACAACTTGCTTCAGATTTGGACTATTTTCTTAAGTTTAGTTGCATTGATAATATTTCAATATTAGTTCTTAATAAAGAAT TAGTTAATATGTCTACAAACGGTATAAGCTCACAAAAAAATATTTTAAGGCTGAAAGAAGTATTTTATTGCTATAAAAAT GTATTTGGAATATGTTTTTTTGTACCCTATATATTAAGATATATTCGAAGAATCTTAACAAGATTATTTAATGAAGTATG A
Upstream 100 bases:
>100_bases AAAAGAGGTTCTGTGACATGTTTAGGTTCTTTAGTCTCAGGTATACTAGAAAAAGATGGAATTTATAAAGGTAACCCTGC TAAGCTTTTTAAATTAAAAG
Downstream 100 bases:
>100_bases ATATTTATCTATTTGGTAAAACCTCTTTATCAGGTGAAGCTTTTTATAAATTCTTTAATTTTCAAAATTCAAAATATAAA ATATACTCTTTTTCCAGAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MITSIKIIVPTLNTYLILPKLINSLKIQTWKDWKLLFIDGDSTKKHFNWIETSCLSDSRINVIKQEKNHKGIYGAMNQGF KTIKDNELVLFWGSDDWAISPSTFGDIISEVNSYKNKYDLLICRGKYIDFKTQGIIRKSYFLENKFLLSLDRKKFRKSLF LGMIPPHQATFFNANAFEKLSSFSENLQLASDLDYFLKFSCIDNISILVLNKELVNMSTNGISSQKNILRLKEVFYCYKN VFGICFFVPYILRYIRRILTRLFNEV
Sequences:
>Translated_266_residues MITSIKIIVPTLNTYLILPKLINSLKIQTWKDWKLLFIDGDSTKKHFNWIETSCLSDSRINVIKQEKNHKGIYGAMNQGF KTIKDNELVLFWGSDDWAISPSTFGDIISEVNSYKNKYDLLICRGKYIDFKTQGIIRKSYFLENKFLLSLDRKKFRKSLF LGMIPPHQATFFNANAFEKLSSFSENLQLASDLDYFLKFSCIDNISILVLNKELVNMSTNGISSQKNILRLKEVFYCYKN VFGICFFVPYILRYIRRILTRLFNEV >Mature_266_residues MITSIKIIVPTLNTYLILPKLINSLKIQTWKDWKLLFIDGDSTKKHFNWIETSCLSDSRINVIKQEKNHKGIYGAMNQGF KTIKDNELVLFWGSDDWAISPSTFGDIISEVNSYKNKYDLLICRGKYIDFKTQGIIRKSYFLENKFLLSLDRKKFRKSLF LGMIPPHQATFFNANAFEKLSSFSENLQLASDLDYFLKFSCIDNISILVLNKELVNMSTNGISSQKNILRLKEVFYCYKN VFGICFFVPYILRYIRRILTRLFNEV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31138; Mature: 31138
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITSIKIIVPTLNTYLILPKLINSLKIQTWKDWKLLFIDGDSTKKHFNWIETSCLSDSRI CCEEEEEEEECCCHHHHHHHHHHHHCCEEECCEEEEEEECCCCCHHHHHHHHHHCCCCCH NVIKQEKNHKGIYGAMNQGFKTIKDNELVLFWGSDDWAISPSTFGDIISEVNSYKNKYDL HHEECCCCCCCEEHHHHCCCEEECCCEEEEEECCCCCEECCHHHHHHHHHHHHCCCCEEE LICRGKYIDFKTQGIIRKSYFLENKFLLSLDRKKFRKSLFLGMIPPHQATFFNANAFEKL EEEECCEEEEECCCHHHHHHHHCCHHEEEHHHHHHHHHHHHCCCCCCCCEEECCHHHHHH SSFSENLQLASDLDYFLKFSCIDNISILVLNKELVNMSTNGISSQKNILRLKEVFYCYKN HHHHHHCHHHHHHHHHHHHEEECCEEEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHH VFGICFFVPYILRYIRRILTRLFNEV HHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MITSIKIIVPTLNTYLILPKLINSLKIQTWKDWKLLFIDGDSTKKHFNWIETSCLSDSRI CCEEEEEEEECCCHHHHHHHHHHHHCCEEECCEEEEEEECCCCCHHHHHHHHHHCCCCCH NVIKQEKNHKGIYGAMNQGFKTIKDNELVLFWGSDDWAISPSTFGDIISEVNSYKNKYDL HHEECCCCCCCEEHHHHCCCEEECCCEEEEEECCCCCEECCHHHHHHHHHHHHCCCCEEE LICRGKYIDFKTQGIIRKSYFLENKFLLSLDRKKFRKSLFLGMIPPHQATFFNANAFEKL EEEECCEEEEECCCHHHHHHHHCCHHEEEHHHHHHHHHHHHCCCCCCCCEEECCHHHHHH SSFSENLQLASDLDYFLKFSCIDNISILVLNKELVNMSTNGISSQKNILRLKEVFYCYKN HHHHHHCHHHHHHHHHHHHEEECCEEEEEEEHHHHCCCCCCCCCHHHHHHHHHHHHHHHH VFGICFFVPYILRYIRRILTRLFNEV HHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA