Definition Prochlorococcus marinus str. MIT 9515, complete genome.
Accession NC_008817
Length 1,704,176

Click here to switch to the map view.

The map label for this gene is 123966474

Identifier: 123966474

GI number: 123966474

Start: 1094289

End: 1094543

Strand: Direct

Name: 123966474

Synonym: P9515_12411

Alternate gene names: NA

Gene position: 1094289-1094543 (Clockwise)

Preceding gene: 123966473

Following gene: 123966478

Centisome position: 64.21

GC content: 29.8

Gene sequence:

>255_bases
ATGATTAAATTTAAAGATGGTTTTTCAAGCGAAAGTTATTATCCAGATAGTAATTATAATCTTGAAAAGAACAATACTTC
TATAGAGACTCCAGTTTCAGAAAATCAAATATCCAATATGGGTGAATTTTTTGAATGGCCAAATACCTATTGGTTTATTG
CAGAAAGAACAAATGGTAGGTTAGCAATGATTGGCTTTATGGCTGTAATTATTAACTACACCTTATTTGGATGGATAGCA
TATCCAATCCTTTAA

Upstream 100 bases:

>100_bases
TTATCAATGGCATAATATAAGAGAGCTTTTAGAAAGAGAACAAGAATACGATTAACAGTAACTATTTTTCCTTTTTAAGA
TATAGAAAATTTCTAATAAA

Downstream 100 bases:

>100_bases
ATAAATATGGAATTTTTTAAGGAGCTTTGGCATAATCAACCAATTACAGTTCTTGGTGTAGGTGCAACAATAGTACTATT
GGTGATGATTTATATCAGAT

Product: high light inducible protein

Products: NA

Alternate protein names: High Light Inducible Protein-Like

Number of amino acids: Translated: 84; Mature: 84

Protein sequence:

>84_residues
MIKFKDGFSSESYYPDSNYNLEKNNTSIETPVSENQISNMGEFFEWPNTYWFIAERTNGRLAMIGFMAVIINYTLFGWIA
YPIL

Sequences:

>Translated_84_residues
MIKFKDGFSSESYYPDSNYNLEKNNTSIETPVSENQISNMGEFFEWPNTYWFIAERTNGRLAMIGFMAVIINYTLFGWIA
YPIL
>Mature_84_residues
MIKFKDGFSSESYYPDSNYNLEKNNTSIETPVSENQISNMGEFFEWPNTYWFIAERTNGRLAMIGFMAVIINYTLFGWIA
YPIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9839; Mature: 9839

Theoretical pI: Translated: 4.19; Mature: 4.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKFKDGFSSESYYPDSNYNLEKNNTSIETPVSENQISNMGEFFEWPNTYWFIAERTNGR
CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHCHHHHCCCCEEEEEEECCCCC
LAMIGFMAVIINYTLFGWIAYPIL
CHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MIKFKDGFSSESYYPDSNYNLEKNNTSIETPVSENQISNMGEFFEWPNTYWFIAERTNGR
CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHCHHHHCCCCEEEEEEECCCCC
LAMIGFMAVIINYTLFGWIAYPIL
CHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA